RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 POTEGQ6S5H5 508 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 POTEEQ6S8J3 1075 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 ATP6V0A4Q9HBG4 840 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 G3BP2Q9UN86 482 aaKnown RBP13.93□□□□□ -0.18
PTPRK-207ENST00000368226 PRELPP51888 382 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 ARHGAP24Q8N264 748 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 SLC12A6Q9UHW9 1150 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 FEM1BQ9UK73 627 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 MMEL1Q495T6 779 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 DGKHQ86XP1 1220 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 CLEC10AQ8IUN9 316 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 LRRC43Q8N309 656 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 EXT2Q93063 718 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 ELP3Q9H9T3 547 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 PRDM5Q9NQX1 630 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-207ENST00000368226 ZNF233A6NK53 670 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 GOLGA8KD6RF30 607 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 PFDN6O15212 129 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 IRX4P78413 519 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 R3HDM1Q15032 1099 aaKnown RBP13.92□□□□□ -0.18
PTPRK-207ENST00000368226 KRT31Q15323 416 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 PPP6R3Q5H9R7 873 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-207ENST00000368226 SCN4BQ8IWT1 228 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 FAM71BQ8TC56 605 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 LRRC8CQ8TDW0 803 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 MMP19Q99542 508 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 CAPS2Q9BXY5 557 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 LY9Q9HBG7 655 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 STK25O00506 426 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 CHGBP05060 677 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 PFKFB3Q16875 520 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-207ENST00000368226 BBS5Q8N3I7 341 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 THAP9Q9H5L6 903 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 NGRNQ9NPE2 291 aaKnown RBP13.92□□□□□ -0.18
PTPRK-207ENST00000368226 HOXC10Q9NYD6 342 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 DAAM1Q9Y4D1 1078 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 ECEL1O95672 775 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 ARID5BQ14865 1188 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 ZNF568Q3ZCX4 644 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 PADI6Q6TGC4 694 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 ZNF710Q8N1W2 664 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 SH2D3AQ9BRG2 576 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 GABBR1Q9UBS5 961 aa13.92□□□□□ -0.18
PTPRK-207ENST00000368226 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 PPFIA4O75335 1185 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 AKR1B1P15121 316 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 CUL4AQ13619 759 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 TEX2Q8IWB9 1127 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 GOLPH3LQ9H4A5 285 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 ZBBXA8MT70 800 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 SRGAP2BP0DMP2 458 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 EPHB1P54762 984 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 FOXO4P98177 505 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
PTPRK-207ENST00000368226 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 TRIM11Q96F44 468 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 ZNF302Q9NR11 478 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 ADAMTS1Q9UHI8 967 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 CLTCL1P53675 1640 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 HMGCS2P54868 508 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 TRIM68Q6AZZ1 485 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 CDC26Q8NHZ8 85 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-207ENST00000368226 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 F5H6K3 240 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 CASQ2O14958 399 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-207ENST00000368226 CLDN3O15551 220 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 PSMA2P25787 234 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 KLRC3Q07444 240 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 PODNQ7Z5L7 613 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 SAAL1Q96ER3 474 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 FAM84BQ96KN1 310 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-207ENST00000368226 IKBKBO14920 756 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 SERPING1P05155 500 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 RCSD1Q6JBY9 416 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 ERICH1Q86X53 443 aa13.91□□□□□ -0.18
PTPRK-207ENST00000368226 RPAP3Q9H6T3 665 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-207ENST00000368226 TDP2O95551 362 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 MB21D1Q8N884 522 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 JAK3P52333 1124 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 MTMR2Q13614 643 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 THOC5Q13769 683 aaKnown RBP13.9□□□□□ -0.18
PTPRK-207ENST00000368226 QRICH1Q2TAL8 776 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 LMNTD2Q8IXW0 634 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 CDC23Q9UJX2 597 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 CAPN7Q9Y6W3 813 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 PLA2R1Q13018 1463 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTPRK-207ENST00000368226 SPATA33Q96N06 139 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
PTPRK-207ENST00000368226 BBOF1Q8ND07 529 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 HEMGNQ9BXL5 484 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 DNAJC12Q9UKB3 198 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 ARHGAP4P98171 946 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 RNF10Q8N5U6 811 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms