RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PSTPIP2Q9H939 334 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PRDM4Q9UKN5 801 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PARP3Q9Y6F1 533 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PREX2Q70Z35 1606 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 COPEO14579 308 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 SRGAP2BP0DMP2 458 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 DLATP10515 647 aaKnown RBP9.4□□□□□ -0.9
COL6A6-201ENST00000358511 BASP1P80723 227 aaKnown RBP9.4□□□□□ -0.9
COL6A6-201ENST00000358511 HIC2Q96JB3 615 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 VCPKMTQ9H867 229 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 ATP6V0A4Q9HBG4 840 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 A6NJR5 290 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 LRRIQ3A6PVS8 624 aaPredicted RBP9.4□□□□□ -0.9
COL6A6-201ENST00000358511 TOM1O60784 492 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 CCDC22O60826 627 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 SERPINI2O75830 405 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 S100BP04271 92 aaPredicted RBP9.4□□□□□ -0.9
COL6A6-201ENST00000358511 CHRNA3P32297 505 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 TRPC1P48995 793 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 ALKBH5Q6P6C2 394 aaKnown RBP9.4□□□□□ -0.9
COL6A6-201ENST00000358511 STRIP2Q9ULQ0 834 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 CCT8L1PA6NM43 557 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 LARGE1O95461 756 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 SCP2P22307 547 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 USH1GQ495M9 461 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 NOD2Q9HC29 1040 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 RPAP1Q9BWH6 1393 aaPredicted RBP9.4□□□□□ -0.9
COL6A6-201ENST00000358511 TJP3O95049 919 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 ATP1A1P05023 1023 aaKnown RBP9.4□□□□□ -0.9
COL6A6-201ENST00000358511 DHX34Q14147 1143 aaKnown RBP9.4□□□□□ -0.9
COL6A6-201ENST00000358511 PNMA1Q8ND90 353 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 MAP3K4Q9Y6R4 1608 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 MICAL3Q7RTP6 2002 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 KRT19P08727 400 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 C10orf88Q9H8K7 445 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 FBXL5Q9UKA1 691 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 FHOD1Q9Y613 1164 aa9.4□□□□□ -0.9
COL6A6-201ENST00000358511 NUMA1Q14980 2115 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 ATP7BP35670 1465 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 PLCG1P19174 1290 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 MORF4L2Q15014 288 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 KLHL38Q2WGJ6 581 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.91
COL6A6-201ENST00000358511 KLC3Q6P597 504 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 MLXIPLQ9NP71 852 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 PDE8AO60658 829 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 TTC17Q96AE7 1141 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 GID8Q9NWU2 228 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 RHBDL2Q9NX52 303 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 ADAMTS1Q9UHI8 967 aa9.4□□□□□ -0.91
COL6A6-201ENST00000358511 M0R2C6 588 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 FOXP2O15409 715 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 KRT38O76015 456 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 AGTP01019 485 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 THAP11Q96EK4 314 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 EYA3Q99504 573 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 CD248Q9HCU0 757 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 DLGAP2Q9P1A6 1054 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 MBD5Q9P267 1494 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 KRT1P04264 644 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 H2AFXP16104 143 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 PGM1P36871 562 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SKOR1P84550 965 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 HIC1Q14526 733 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 NECTIN1Q15223 517 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 TRIP13Q15645 432 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 AGBL2Q5U5Z8 902 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 RCSD1Q6JBY9 416 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 NT5C1BQ96P26 610 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 ARHGAP26Q9UNA1 814 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 ERVK-7P63135 1459 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 DEAF1O75398 565 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SERPINB4P48594 390 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 EIF6P56537 245 aaKnown RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 NAIF1Q69YI7 327 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 KRT28Q7Z3Y7 464 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 CFAP36Q96G28 342 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 STX18Q9P2W9 335 aaKnown RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SEPT3Q9UH03 358 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SNX12Q9UMY4 172 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 JAG2Q9Y219 1238 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 E9PMD0 336 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 DDX39AO00148 427 aaKnown RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 BRAFP15056 766 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 ARL4CP56559 192 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 DSG1Q02413 1049 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 FAM186BQ8IYM0 893 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SNX5Q9Y5X3 404 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 CFAP69A5D8W1 941 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SNUPNO95149 360 aaKnown RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 CYP2E1P05181 493 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 ACADSP16219 412 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 MAP4P27816 1152 aaKnown RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 TFAP4Q01664 338 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 GFPT1Q06210 699 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 PRPSAP1Q14558 356 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 ACAD11Q709F0 780 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 DCLK2Q8N568 766 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms