RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Ces1eQ64176 562 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Sun2Q8BJS4 731 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Bpifb6Q8BU51 449 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ccdc73Q8CDM4 1066 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Il17cQ8K4C5 194 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Defb15Q8R2I5 79 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Slc14a1Q8VHL0 384 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Nr3c2Q8VII8 978 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Atp5c1Q91VR2 298 aaKnown RBP11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Creb3l3Q91XE9 479 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Asic2Q925H0 512 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Med24Q99K74 987 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Klf15Q9EPW2 415 aa11.15□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cntnap5cQ0V8T7 1305 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Fam129cD3YZB0 591 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Magea4F2Z493 315 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Dhx15O35286 795 aaKnown RBP11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ap1b1O35643 943 aaKnown RBP11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Dnajb6O54946 365 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 FechP22315 420 aaKnown RBP11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Bace1P56818 501 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Zfp953Q3UPV7 304 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Skap1Q3UUV5 355 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Fdxacb1Q3UY23 622 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Rnf207Q3V3A7 635 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Lrig2Q52KR2 1054 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cyp2c67Q569X9 491 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Msantd2Q6NZR2 559 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Senp6Q6P7W0 1132 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Fez2Q6TYB5 348 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Nipa1Q8BHK1 323 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ptrh1Q8BW00 204 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Camkk2Q8C078 588 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Tut1Q8R3F9 869 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Usp15Q8R5H1 981 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 OscarQ8VBT3 265 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 VillQ91YD6 859 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Spata17Q9D552 379 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Angptl3Q9R182 455 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Adgrf5G5E8Q8 1348 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 XdhQ00519 1335 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cntnap2Q9CPW0 1332 aa11.14□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 NinQ61043 2035 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Btbd18A0A0A6YY25 723 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Nova2D3YVV7 556 aaKnown RBP11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Gm38392E9Q2A2 434 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Klrk1O54709 232 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 MyocO70624 490 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 P4hbP09103 509 aaKnown RBP11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 NfibP97863 570 aaKnown RBP11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Klra9Q2TJJ8 266 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Vwa3aQ3UVV9 1148 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Pacsin1Q61644 441 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Secisbp2lQ6A098 1086 aaKnown RBP11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Zfp341Q6PGC9 846 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Tmem132dQ76HP3 1097 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Usp17leQ7M764 540 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Raver2Q7TPD6 673 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Btnl9Q8BJE2 536 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Kbtbd13Q8C828 458 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 IntS13Q8QZV7 732 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Enox2Q8R0Z2 598 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Dnajc17Q91WT4 303 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Prc1Q99K43 603 aaKnown RBP11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Npm3Q9CPP0 175 aaKnown RBP11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Mageb16Q9CWV4 363 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Q9D5Q8 446 aa11.13□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Nfxl1E9Q8I7 918 aaKnown RBP11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Pja1O55176 578 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Parp2O88554 559 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Idh1O88844 414 aaKnown RBP11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Pde4aO89084 844 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 GcP21614 476 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Serpinc1P32261 465 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Pla2g4aP47713 748 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Capza3P70190 299 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Dcaf17Q3TUL7 519 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Muc3aQ3U5A2 218 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 4933427I04RikQ3V053 235 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 LdhdQ7TNG8 484 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Acad11Q80XL6 779 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Vipas39Q8BGQ1 491 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Rtp1Q8C8C1 263 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Bzw2Q91VK1 419 aaKnown RBP11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ergic2Q9CR89 377 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Galnt15Q9D2N8 638 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Kcnh7Q9ER47 1195 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cabp5Q9JLK3 173 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Usp14Q9JMA1 493 aaKnown RBP11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Tlr2Q9QUN7 784 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Gm11983V9GXS8 105 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Gm28919A0A087WP35 240 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Oip5A2AQ14 241 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ccdc85cE9Q6B2 420 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Kcnu1O54982 1121 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Itgb5O70309 798 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Got1P05201 413 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cd44P15379 778 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cap1P40124 474 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Nhej1Q3KNJ2 295 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms