RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Gadd45gQ9Z111 159 aa13.41□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Fem1bQ9Z2G0 627 aa13.41□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Epas1P97481 874 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 LdhdQ7TNG8 484 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Cacnb1Q8R3Z5 597 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Pdia6Q922R8 440 aaKnown RBP13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Trpc4Q9QUQ5 974 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 VdrP48281 422 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Slc8a1P70414 970 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ece1Q4PZA2 769 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Cep70Q6IQY5 616 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 C2cd5Q7TPS5 1016 aaKnown RBP13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Rnf168Q80XJ2 565 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Sucla2Q9Z2I9 463 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Nos1Q9Z0J4 1429 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ephx4Q6IE26 359 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Gpr108Q91WD0 569 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Prpf6Q91YR7 941 aaKnown RBP13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Tnrc6bQ8BKI2 1810 aaKnown RBP13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Zfp626A0A0U1RQ84 676 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Apol6B7ZC55 329 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Zbtb17Q60821 794 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 CenpsQ9D084 142 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Chordc1Q9D1P4 331 aaKnown RBP13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Cd2apQ9JLQ0 637 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Usp42B2RQC2 1324 aaKnown RBP13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Zfp846G3X996 541 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Hoxc10P31257 342 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Bach2P97303 839 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Xxylt1Q3U4G3 392 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Dnajc6Q80TZ3 938 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Aldh1b1Q9CZS1 519 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Nr2e3Q9QXZ7 395 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Acot3Q9QYR7 432 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Morf4l2Q9R0Q4 288 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Myh9Q8VDD5 1960 aaKnown RBP13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Vwa3bJ9JI28 736 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Gm21962L7N280 338 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Abcb1bP06795 1276 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Tubgcp3P58854 905 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Cog5Q8C0L8 829 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Noxred1Q9D3S5 366 aa13.4□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Sult1d1Q3UZZ6 295 aa13.4□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Adamts18Q4VC17 1219 aa13.4□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ttc27Q8CD92 847 aa13.4□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Krt78E9Q0F0 1068 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nr1h4Q60641 488 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 GypcQ78HU7 95 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Pomgnt2Q8BW41 605 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 St13Q99L47 371 aaKnown RBP13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rnaseh2aQ9CWY8 301 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 4921524L21RikQ9D5T2 438 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Disp3A3KFU9 1347 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Usp53P15975 1069 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Aco1P28271 889 aaKnown RBP13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Pkp1P97350 728 aaKnown RBP13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 RnaselQ05921 735 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Runx2Q08775 607 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Kctd16Q5DTY9 427 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Krt74Q6IFZ9 495 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Bcs1lQ9CZP5 418 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 ChmQ9QXG2 665 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Pde6aP27664 859 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Atp9bP98195 1146 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Mapk4Q6P5G0 583 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Bend3Q6PAL0 825 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Syne4Q8CII8 388 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 ScgnQ91WD9 276 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Adgrl3Q80TS3 1537 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ces1eQ64176 562 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Pla2g4cQ64GA5 597 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 NostrinQ6WKZ7 506 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Uggt1Q6P5E4 1551 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Syngap1F6SEU4 1340 aa13.39□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cspg5Q71M36 566 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Klhl29Q80T74 875 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Klhl11Q8CE33 709 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Trpd52l3Q9CQ14 231 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Serpina9Q9D7D2 418 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Sh2d4aQ9D7V1 421 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Habp4Q9JKS5 411 aaKnown RBP13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Myo3bQ1EG27 1305 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nudt18Q3U2V3 323 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ces3aQ63880 571 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Etf1Q8BWY3 437 aaKnown RBP13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Snx16Q8C080 344 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ces1Q8VCC2 565 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ces3bQ8VCU1 571 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Fuca2Q99KR8 461 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rap1gds1E9Q912 607 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Tcp11Q01755 566 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 VcpQ01853 806 aaKnown RBP13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 TdrkhQ80VL1 560 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cdc23Q8BGZ4 597 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rnf6Q9DBU5 667 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cyp3a57D3YYZ0 503 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rsad1Q5SUV1 442 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rbbp7Q60973 425 aaKnown RBP13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Hsph1Q61699 858 aaKnown RBP13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gja10Q9WUS4 505 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms