RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Gja10Q9WUS4 505 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Zfp472B0V2W5 534 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Kcna1P16388 495 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Eno3P21550 434 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Atp9bP98195 1146 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Nxf2Q4ZGD8 691 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Nme8Q715T0 586 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Tubgcp2Q921G8 905 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Map3k20Q9ESL4 802 aaKnown RBP11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Tns3Q5SSZ5 1440 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 AU019823E9PUQ3 292 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Pcdha12Q91Y18 950 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ndufaf7Q9CWG8 436 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Aifm3Q3TY86 605 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 SpdyaQ5IBH7 310 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ppp1r13bQ62415 1087 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Znf507Q6ZPY5 941 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Rps6kc1Q8BLK9 1056 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 C8aQ8K182 587 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Pcdhb21Q91V48 774 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Chmp1b1Q99LU0 199 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ecel1Q9JMI0 775 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Mroh6V9GX81 722 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Zfp788E9Q980 884 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Tcp1P11983 556 aaKnown RBP11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 RarbP22605 482 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Capza2P47754 286 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Zhx3Q8C0Q2 951 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Fbxl5Q8C2S5 690 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Serpina3nQ91WP6 418 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Prg3Q9JL95 222 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Rabgef1Q9JM13 491 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ino80Q6ZPV2 1559 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 VcpQ01853 806 aaKnown RBP11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Myo6Q64331 1265 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Sgsm2Q80U12 1005 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Rnf6Q9DBU5 667 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Gpr182P43142 395 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Thumpd3P97770 505 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 RnaselQ05921 735 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Trim75Q3UWZ0 467 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pde10aQ8CA95 790 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Gpc3Q8CFZ4 579 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pcdha7Q91Y13 937 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Sf3a3Q9D554 501 aaKnown RBP11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Elf2Q9JHC9 593 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Disp1Q3TDN0 1521 aa11.15□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Ulk3Q3U3Q1 472 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Nrbf2Q8VCQ3 287 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Trim16Q99PP9 556 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Atp5oQ9DB20 213 aaKnown RBP11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Angptl3Q9R182 455 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Anapc7Q9WVM3 565 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pcdhb9E9Q5G2 828 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 DSCC1Q14AI0 399 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Serpinb1cQ5SV42 375 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Srp68Q8BMA6 625 aaKnown RBP11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Snx17Q8BVL3 470 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Snx16Q8C080 344 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Maged2Q9ER67 616 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Psma3O70435 255 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Oog4Q4G0C7 502 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Znf148Q61624 794 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Tigd4Q8BUZ3 513 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Eif2b5Q8CHW4 717 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Ighmbp2P40694 993 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Nek1P51954 1203 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pla2g4eQ50L42 875 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Lca5Q80ST9 704 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Spon1Q8VCC9 807 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Ptk2P34152 1090 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Kcnma1Q08460 1209 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Trim72Q1XH17 477 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Tbc1d22bQ80VE5 505 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Rassf10Q8BL43 508 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Tada2aQ8CHV6 443 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Akr1c14Q91WT7 323 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Rbp7Q9EPC5 134 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Sdccag3A2AIW0 432 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Rsph10bE9PYQ0 876 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Spata31E9QAF0 1014 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Q6PD19 689 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Lonp2Q9DBN5 852 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Gm20425E9Q035 978 aaKnown RBP11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Cd3dP04235 173 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 SrprbP47758 269 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Tsr1Q5SWD9 803 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 MlphQ91V27 590 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Dhx58Q99J87 678 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Mtmr1Q9Z2C4 669 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Aox2Q5SGK3 1345 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Prr5lA2AVJ5 370 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Zbtb7aO88939 569 aaKnown RBP11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 PhkbQ7TSH2 1085 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Hgh1Q8C3I8 393 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Mfap3Q922T2 349 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 HaspinQ9Z0R0 754 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 GsdmeQ9Z2D3 512 aa11.14□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Cyth3O08967 399 aa11.13□□□□□ -0.63
Scn9a-201ENSMUST00000100063 Pcdhb7Q8CDY9 829 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms