RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 RPS7BP48164 190 aaKnown RBP-2.27□□□□□ -2.77
snR40snR40 PRP38Q00723 242 aaPredicted RBP-2.27□□□□□ -2.77
snR40snR40 LCL2Q08045 131 aa-2.27□□□□□ -2.77
snR40snR40 TMA16Q08687 178 aa-2.27□□□□□ -2.77
snR40snR40 RMP1Q12530 201 aa-2.27□□□□□ -2.77
snR40snR40 SSB1P11484 613 aaKnown RBP-2.28□□□□□ -2.77
snR40snR40 PUP3P25451 205 aaKnown RBP-2.28□□□□□ -2.77
snR40snR40 INO2P26798 304 aa-2.28□□□□□ -2.77
snR40snR40 ARO4P32449 370 aaKnown RBP-2.28□□□□□ -2.77
snR40snR40 DPH5P32469 300 aaPredicted RBP-2.28□□□□□ -2.77
snR40snR40 SSE1P32589 693 aaKnown RBP-2.28□□□□□ -2.77
snR40snR40 MUM2P38236 366 aa-2.28□□□□□ -2.77
snR40snR40 ICS2P38284 255 aa-2.28□□□□□ -2.77
snR40snR40 SSB2P40150 613 aaKnown RBP-2.28□□□□□ -2.77
snR40snR40 SPC105P53148 917 aa-2.28□□□□□ -2.77
snR40snR40 REG1Q00816 1014 aa-2.28□□□□□ -2.77
snR40snR40 MRX11Q03079 207 aa-2.28□□□□□ -2.77
snR40snR40 GAS2Q06135 555 aa-2.28□□□□□ -2.77
snR40snR40 TFC6Q06339 672 aa-2.28□□□□□ -2.77
snR40snR40 MDM36Q06820 579 aa-2.28□□□□□ -2.77
snR40snR40 ACC1Q00955 2233 aaKnown RBP-2.28□□□□□ -2.77
snR40snR40 ILV5P06168 395 aaKnown RBP-2.29□□□□□ -2.78
snR40snR40 PWP1P21304 576 aaKnown RBP-2.29□□□□□ -2.78
snR40snR40 ADH7P25377 361 aa-2.29□□□□□ -2.78
snR40snR40 CAB3P36076 571 aa-2.29□□□□□ -2.78
snR40snR40 YNG2P38806 282 aaKnown RBP-2.29□□□□□ -2.78
snR40snR40 SFH5P47008 294 aa-2.29□□□□□ -2.78
snR40snR40 SLD3P53135 668 aa-2.29□□□□□ -2.78
snR40snR40 SLM2P53955 656 aa-2.29□□□□□ -2.78
snR40snR40 YDR387CQ04162 555 aa-2.29□□□□□ -2.78
snR40snR40 SOV1Q04748 898 aa-2.29□□□□□ -2.78
snR40snR40 NSE3Q05541 303 aa-2.29□□□□□ -2.78
snR40snR40 CSI2Q08054 341 aa-2.29□□□□□ -2.78
snR40snR40 NFI1Q12216 726 aa-2.29□□□□□ -2.78
snR40snR40 YBR085C-AO43137 85 aa-2.3□□□□□ -2.78
snR40snR40 TDH1P00360 332 aaKnown RBP-2.3□□□□□ -2.78
snR40snR40 UPS2P35200 230 aa-2.3□□□□□ -2.78
snR40snR40 NUP82P40368 713 aa-2.3□□□□□ -2.78
snR40snR40 APT1P49435 187 aaKnown RBP-2.3□□□□□ -2.78
snR40snR40 LSG1P53145 640 aaKnown RBP-2.3□□□□□ -2.78
snR40snR40 SDS23P53172 527 aa-2.3□□□□□ -2.78
snR40snR40 YGR127WP53275 312 aa-2.3□□□□□ -2.78
snR40snR40 RNH201P53942 307 aa-2.3□□□□□ -2.78
snR40snR40 IOC4Q04213 475 aa-2.3□□□□□ -2.78
snR40snR40 API2Q04413 109 aa-2.3□□□□□ -2.78
snR40snR40 IWR1Q07532 353 aaPredicted RBP-2.3□□□□□ -2.78
snR40snR40 DCN1Q12395 269 aa-2.3□□□□□ -2.78
snR40snR40 BRR1Q99177 341 aaPredicted RBP-2.3□□□□□ -2.78
snR40snR40 YCR102CP25608 368 aa-2.31□□□□□ -2.78
snR40snR40 IMG1P25626 169 aa-2.31□□□□□ -2.78
snR40snR40 KRE2P27809 442 aa-2.31□□□□□ -2.78
snR40snR40 PDB1P32473 366 aaKnown RBP-2.31□□□□□ -2.78
snR40snR40 RRP1P35178 278 aaPredicted RBP-2.31□□□□□ -2.78
snR40snR40 SAW1P39735 261 aa-2.31□□□□□ -2.78
snR40snR40 GPP1P41277 250 aaKnown RBP-2.31□□□□□ -2.78
snR40snR40 IME4P41833 600 aa-2.31□□□□□ -2.78
snR40snR40 PIR5P46999 287 aa-2.31□□□□□ -2.78
snR40snR40 SGT1Q08446 395 aa-2.31□□□□□ -2.78
snR40snR40 RPB9P27999 122 aa-2.32□□□□□ -2.78
snR40snR40 YBR241CP38142 488 aa-2.32□□□□□ -2.78
snR40snR40 YBR219CP38317 127 aa-2.32□□□□□ -2.78
snR40snR40 POP1P41812 875 aa-2.32□□□□□ -2.78
snR40snR40 MFB1Q04922 465 aa-2.32□□□□□ -2.78
snR40snR40 YHC1Q05900 231 aaKnown RBP-2.32□□□□□ -2.78
snR40snR40 SPO77Q06134 477 aa-2.32□□□□□ -2.78
snR40snR40 THI73Q07904 523 aa-2.32□□□□□ -2.78
snR40snR40 LOT6Q07923 191 aa-2.32□□□□□ -2.78
snR40snR40 RAX1Q08760 435 aa-2.32□□□□□ -2.78
snR40snR40 HIF1Q12373 385 aa-2.32□□□□□ -2.78
snR40snR40 ERG27Q12452 347 aaKnown RBP-2.32□□□□□ -2.78
snR40snR40 RMD5Q12508 421 aa-2.32□□□□□ -2.78
snR40snR40 CBS1P14066 229 aa-2.33□□□□□ -2.78
snR40snR40 SLM5P25345 492 aaKnown RBP-2.33□□□□□ -2.78
snR40snR40 YKL187CP34231 750 aa-2.33□□□□□ -2.78
snR40snR40 LSM12P38828 187 aaKnown RBP-2.33□□□□□ -2.78
snR40snR40 RPL13BP40212 199 aaKnown RBP-2.33□□□□□ -2.78
snR40snR40 DUG1P43616 481 aaKnown RBP-2.33□□□□□ -2.78
snR40snR40 FAR3P46671 204 aa-2.33□□□□□ -2.78
snR40snR40 YJL016WP47072 561 aa-2.33□□□□□ -2.78
snR40snR40 MAD3P47074 515 aa-2.33□□□□□ -2.78
snR40snR40 ALF1P53904 254 aa-2.33□□□□□ -2.78
snR40snR40 EIS1Q05050 843 aaKnown RBP-2.33□□□□□ -2.78
snR40snR40 DIB1Q06819 143 aaPredicted RBP-2.33□□□□□ -2.78
snR40snR40 YDL114WQ07530 308 aa-2.33□□□□□ -2.78
snR40snR40 NUS1Q12063 375 aa-2.33□□□□□ -2.78
snR40snR40 RPL13AQ12690 199 aaPredicted RBP-2.33□□□□□ -2.78
snR40snR40 MEX67Q99257 599 aaKnown RBP-2.33□□□□□ -2.78
snR40snR40 AQY2P0CD90 149 aa-2.34□□□□□ -2.78
snR40snR40 FUN26P31381 517 aa-2.34□□□□□ -2.78
snR40snR40 TIP20P33891 701 aa-2.34□□□□□ -2.78
snR40snR40 CBP4P37267 147 aa-2.34□□□□□ -2.78
snR40snR40 SHE1P38200 338 aa-2.34□□□□□ -2.78
snR40snR40 YHR045WP38775 560 aa-2.34□□□□□ -2.78
snR40snR40 KEG1P43614 200 aa-2.34□□□□□ -2.78
snR40snR40 NIT2P47016 307 aa-2.34□□□□□ -2.78
snR40snR40 ECM27P47144 725 aa-2.34□□□□□ -2.78
snR40snR40 PEX8P53248 589 aa-2.34□□□□□ -2.78
snR40snR40 MPA43P53583 542 aaPredicted RBP-2.34□□□□□ -2.78
snR40snR40 COQ9Q05779 260 aa-2.34□□□□□ -2.78
snR40snR40 PSR1Q07800 427 aa-2.34□□□□□ -2.78
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms