RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	ROX1	P25042	368 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	RVS161	P25343	265 aa	Known RBP	0.63	□□□□□ -2.31
BEM3	YPL115C	OCA4	P25366	362 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	NUP2	P32499	720 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	CSE2	P33308	149 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	KAP104	P38217	918 aa	Known RBP	0.63	□□□□□ -2.31
BEM3	YPL115C	YGR111W	P53265	400 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	CAF40	P53829	373 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	NUP116	Q02630	1113 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	RSN1	Q03516	953 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	BET5	Q03630	159 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	SOR2	Q07786	357 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	GCN2	P15442	1659 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	YCF1	P39109	1515 aa	Known RBP	0.63	□□□□□ -2.31
BEM3	YPL115C	ATP10	P18496	279 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	MSP1	P28737	362 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
BEM3	YPL115C	CMC1	P36064	111 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	FAR3	P46671	204 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	YGR066C	P53242	292 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	ADA2	Q02336	434 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	ABZ2	Q03266	374 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	SMP3	Q04174	516 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	HRI1	Q05905	244 aa	Known RBP	0.63	□□□□□ -2.31
BEM3	YPL115C	BUR2	Q05949	395 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	MRD1	Q06106	887 aa	Known RBP	0.63	□□□□□ -2.31
BEM3	YPL115C	MLP2	P40457	1679 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	NUM1	Q00402	2748 aa		0.63	□□□□□ -2.31
BEM3	YPL115C	VMR1	P38735	1592 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	TRP1	P00912	224 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	RPC53	P25441	422 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	YCR100C	P25606	316 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	PRP21	P32524	280 aa	Predicted RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	IES6	P32617	166 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	COX13	P32799	129 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	CYM1	P32898	989 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	LAS1	P36146	502 aa	Predicted RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	OTU2	P38747	307 aa	Known RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	FLC2	P39719	783 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	UTP18	P40362	594 aa	Predicted RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	GAB1	P41733	394 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	SHY1	P53266	389 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	FRE4	P53746	719 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	PPM1	Q04081	328 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	PML1	Q07930	204 aa	Predicted RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	SDH5	Q08230	162 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	BUD3	P25558	1636 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	SPS100	P13130	326 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	OLE1	P21147	510 aa	Known RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	PHO91	P27514	894 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	REC114	P32841	428 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	PEX5	P35056	612 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	PTI1	P39927	425 aa	Predicted RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	SPR6	Q01684	191 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	YMR010W	Q03687	405 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	YMR111C	Q04461	462 aa	Predicted RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	PAL1	Q05518	499 aa	Known RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	SNT309	Q06091	175 aa	Predicted RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	ECM7	Q06200	448 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	ARR1	Q06596	294 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	YPQ1	Q12010	308 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	VAM3	Q12241	283 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	SEM1	O94742	89 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	PET123	P17558	318 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	RRP7	P25368	297 aa	Predicted RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	RAD14	P28519	371 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	YME2	P32843	850 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	PRY2	P36110	329 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	RIB5	P38145	238 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	SER3	P40054	469 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	MET28	P40573	187 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	CHS6	P40955	746 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	HIT1	P46973	164 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	CUE3	P53137	624 aa	Known RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	YGL108C	P53139	140 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	TWF1	P53250	332 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	TAF11	Q04226	346 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	YMR027W	Q04371	470 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	YDR286C	Q05530	114 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	RRP45	Q05636	305 aa	Known RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	LSP1	Q12230	341 aa	Known RBP	0.62	□□□□□ -2.31
BEM3	YPL115C	ISN1	Q99312	450 aa		0.62	□□□□□ -2.31
BEM3	YPL115C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.61	□□□□□ -2.31	not detected
BEM3	YPL115C	STE3	P06783	470 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	CYS4	P32582	507 aa	Known RBP	0.61	□□□□□ -2.31
BEM3	YPL115C	BAT1	P38891	393 aa	Known RBP	0.61	□□□□□ -2.31
BEM3	YPL115C	MMF1	P40185	145 aa	Known RBP	0.61	□□□□□ -2.31
BEM3	YPL115C	IBD2	P53892	351 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	RRN11	Q04712	507 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	ASA1	Q06822	443 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	PLP2	Q12017	286 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	YLR108C	Q12259	485 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	YOL085C	Q99345	113 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	HHF1	P02309	103 aa	Known RBP	0.61	□□□□□ -2.31
BEM3	YPL115C	MRE11	P32829	692 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	SDH3	P33421	198 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	SEC66	P33754	206 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	END3	P39013	349 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	JLP2	P40206	208 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	CAK1	P43568	368 aa	Predicted RBP	0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms