RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C CYS4P32582 507 aaKnown RBP3.62□□□□□ -1.83
RPN8YOR261C MPE1P35728 441 aaKnown RBP3.62□□□□□ -1.83
RPN8YOR261C STN1P38960 494 aa3.62□□□□□ -1.83
RPN8YOR261C AIM10P39965 576 aaKnown RBP3.62□□□□□ -1.83
RPN8YOR261C UTP18P40362 594 aaPredicted RBP3.62□□□□□ -1.83
RPN8YOR261C TOS3P43637 560 aa3.62□□□□□ -1.83
RPN8YOR261C MRM2P53123 320 aa3.62□□□□□ -1.83
RPN8YOR261C YGR111WP53265 400 aa3.62□□□□□ -1.83
RPN8YOR261C YDR341CQ05506 607 aaKnown RBP3.62□□□□□ -1.83
RPN8YOR261C YLR456WQ06199 204 aa3.62□□□□□ -1.83
RPN8YOR261C NDE2Q07500 545 aa3.62□□□□□ -1.83
RPN8YOR261C CAP2P13517 287 aa3.61□□□□□ -1.83
RPN8YOR261C RIM1P32445 135 aaKnown RBP3.61□□□□□ -1.83
RPN8YOR261C YKL097CP34245 136 aa3.61□□□□□ -1.83
RPN8YOR261C ATP3P38077 311 aaKnown RBP3.61□□□□□ -1.83
RPN8YOR261C OLA1P38219 394 aaKnown RBP3.61□□□□□ -1.83
RPN8YOR261C STP2P38704 541 aa3.61□□□□□ -1.83
RPN8YOR261C COX14P39103 70 aa3.61□□□□□ -1.83
RPN8YOR261C ADA2Q02336 434 aa3.61□□□□□ -1.83
RPN8YOR261C MDM36Q06820 579 aa3.61□□□□□ -1.83
RPN8YOR261C CUE5Q08412 411 aaKnown RBP3.61□□□□□ -1.83
RPN8YOR261C YGK3Q12222 375 aaPredicted RBP3.61□□□□□ -1.83
RPN8YOR261C NCA2Q12374 616 aa3.61□□□□□ -1.83
RPN8YOR261C NAM2P11325 894 aa3.6□□□□□ -1.83
RPN8YOR261C MSI1P13712 422 aa3.6□□□□□ -1.83
RPN8YOR261C UTH1P36135 365 aa3.6□□□□□ -1.83
RPN8YOR261C YER079WP40052 210 aaKnown RBP3.6□□□□□ -1.83
RPN8YOR261C HAL1Q01766 294 aa3.6□□□□□ -1.83
RPN8YOR261C SMC6Q12749 1114 aa3.6□□□□□ -1.83
RPN8YOR261C RPB5P20434 215 aa3.59□□□□□ -1.83
RPN8YOR261C PCL1P24867 279 aa3.59□□□□□ -1.83
RPN8YOR261C HSP104P31539 908 aaKnown RBP3.59□□□□□ -1.83
RPN8YOR261C DPH5P32469 300 aaPredicted RBP3.59□□□□□ -1.83
RPN8YOR261C MIG3P39943 394 aa3.59□□□□□ -1.83
RPN8YOR261C JID1Q12350 301 aa3.59□□□□□ -1.83
RPN8YOR261C DST1P07273 309 aa3.58□□□□□ -1.84
RPN8YOR261C HSP26P15992 214 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
RPN8YOR261C ALG1P16661 449 aa3.58□□□□□ -1.84
RPN8YOR261C SKN1P33336 771 aa3.58□□□□□ -1.84
RPN8YOR261C YHK8P38776 514 aa3.58□□□□□ -1.84
RPN8YOR261C GPI16P38875 610 aa3.58□□□□□ -1.84
RPN8YOR261C BUD27P43573 796 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
RPN8YOR261C YML6P51998 286 aa3.58□□□□□ -1.84
RPN8YOR261C MST27P53176 234 aa3.58□□□□□ -1.84
RPN8YOR261C PIB2P53191 635 aa3.58□□□□□ -1.84
RPN8YOR261C RIF2Q06208 395 aa3.58□□□□□ -1.84
RPN8YOR261C DCI1Q08558 271 aa3.58□□□□□ -1.84
RPN8YOR261C GPM3Q12326 303 aa3.58□□□□□ -1.84
RPN8YOR261C NAT1P12945 854 aaKnown RBP3.57□□□□□ -1.84
RPN8YOR261C LTV1P34078 463 aa3.57□□□□□ -1.84
RPN8YOR261C INM1P38710 295 aa3.57□□□□□ -1.84
RPN8YOR261C FAD1P38913 306 aa3.57□□□□□ -1.84
RPN8YOR261C YFR057WP43625 151 aa3.57□□□□□ -1.84
RPN8YOR261C AIM24P47127 394 aa3.57□□□□□ -1.84
RPN8YOR261C BNS1P50084 137 aa3.57□□□□□ -1.84
RPN8YOR261C YMR102CQ03177 834 aa3.57□□□□□ -1.84
RPN8YOR261C NSE1Q07913 336 aa3.57□□□□□ -1.84
RPN8YOR261C SMC5Q08204 1093 aa3.57□□□□□ -1.84
RPN8YOR261C CEX1Q12453 761 aa3.57□□□□□ -1.84
RPN8YOR261C CDC21P06785 304 aa3.56□□□□□ -1.84
RPN8YOR261C ATP1P07251 545 aaKnown RBP3.56□□□□□ -1.84
RPN8YOR261C VMA8P32610 256 aaKnown RBP3.56□□□□□ -1.84
RPN8YOR261C SRP72P38688 640 aaKnown RBP3.56□□□□□ -1.84
RPN8YOR261C LCB3P47013 409 aa3.56□□□□□ -1.84
RPN8YOR261C TDA1Q03533 586 aa3.56□□□□□ -1.84
RPN8YOR261C RTN1Q04947 295 aaKnown RBP3.56□□□□□ -1.84
RPN8YOR261C SMF3Q12078 473 aaPredicted RBP3.56□□□□□ -1.84
RPN8YOR261C SSC1P0CS90 654 aaKnown RBP3.55□□□□□ -1.84
RPN8YOR261C YEF1P32622 495 aa3.55□□□□□ -1.84
RPN8YOR261C ANR2P36090 516 aaPredicted RBP3.55□□□□□ -1.84
RPN8YOR261C RTC2P38279 296 aa3.55□□□□□ -1.84
RPN8YOR261C MMF1P40185 145 aaKnown RBP3.55□□□□□ -1.84
RPN8YOR261C BIR1P47134 954 aa3.55□□□□□ -1.84
RPN8YOR261C STE24P47154 453 aa3.55□□□□□ -1.84
RPN8YOR261C YGR117CP53270 476 aa3.55□□□□□ -1.84
RPN8YOR261C CRH1P53301 507 aa3.55□□□□□ -1.84
RPN8YOR261C CMS1Q07897 291 aaKnown RBP3.55□□□□□ -1.84
RPN8YOR261C RNH203Q12338 110 aa3.55□□□□□ -1.84
RPN8YOR261C POM152P39685 1337 aa3.54□□□□□ -1.84
RPN8YOR261C PRR1P28708 518 aa3.54□□□□□ -1.84
RPN8YOR261C BAT1P38891 393 aaKnown RBP3.54□□□□□ -1.84
RPN8YOR261C PTI1P39927 425 aaPredicted RBP3.54□□□□□ -1.84
RPN8YOR261C MAM33P40513 266 aa3.54□□□□□ -1.84
RPN8YOR261C HAC1P41546 238 aa3.54□□□□□ -1.84
RPN8YOR261C TOS2P50078 622 aa3.54□□□□□ -1.84
RPN8YOR261C CIK1Q01649 594 aa3.54□□□□□ -1.84
RPN8YOR261C SPR6Q01684 191 aa3.54□□□□□ -1.84
RPN8YOR261C LOT6Q07923 191 aa3.54□□□□□ -1.84
RPN8YOR261C EAF3Q12432 401 aa3.54□□□□□ -1.84
RPN8YOR261C PAB1P04147 577 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84 RIP-Chip
RPN8YOR261C PIS1P06197 220 aaKnown RBP3.53□□□□□ -1.84
RPN8YOR261C AAT2P23542 418 aaKnown RBP3.53□□□□□ -1.84
RPN8YOR261C SPT10P35208 640 aa3.53□□□□□ -1.84
RPN8YOR261C MRP21P38175 177 aa3.53□□□□□ -1.84
RPN8YOR261C QDR3P38227 689 aa3.53□□□□□ -1.84
RPN8YOR261C OXA1P39952 402 aa3.53□□□□□ -1.84
RPN8YOR261C DFG10P40526 253 aa3.53□□□□□ -1.84
RPN8YOR261C EGT2P42835 1041 aa3.53□□□□□ -1.84
RPN8YOR261C ATG18P43601 500 aa3.53□□□□□ -1.84
RPN8YOR261C ECM7Q06200 448 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms