RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C AFT2Q08957 416 aa5.16□□□□□ -1.58
NUP1YOR098C YBL111CQ3E7Y5 667 aa5.16□□□□□ -1.58
NUP1YOR098C YPK2P18961 677 aa5.15□□□□□ -1.58
NUP1YOR098C RPC25P35718 212 aa5.15□□□□□ -1.58
NUP1YOR098C EFM2P38347 419 aa5.15□□□□□ -1.58
NUP1YOR098C STP2P38704 541 aa5.15□□□□□ -1.58
NUP1YOR098C YHR122WP38829 231 aa5.15□□□□□ -1.58
NUP1YOR098C MUP1P50276 574 aa5.15□□□□□ -1.58
NUP1YOR098C UBC11P52492 156 aa5.15□□□□□ -1.58
NUP1YOR098C YMR178WQ03219 274 aaKnown RBP5.15□□□□□ -1.58
NUP1YOR098C NCB2Q92317 146 aa5.15□□□□□ -1.58
NUP1YOR098C SCEIP03882 235 aa5.15□□□□□ -1.59
NUP1YOR098C CNA1P23287 553 aa5.15□□□□□ -1.59
NUP1YOR098C TRS85P46944 698 aa5.15□□□□□ -1.59
NUP1YOR098C ERG26P53199 349 aaKnown RBP5.15□□□□□ -1.59
NUP1YOR098C PXR1P53335 271 aaPredicted RBP5.15□□□□□ -1.59
NUP1YOR098C DIP5P53388 608 aa5.15□□□□□ -1.59
NUP1YOR098C SLT2Q00772 484 aa5.15□□□□□ -1.59
NUP1YOR098C UBX2Q04228 584 aa5.15□□□□□ -1.59
NUP1YOR098C PDR8Q06149 701 aa5.15□□□□□ -1.59
NUP1YOR098C YDL086WQ07505 273 aa5.15□□□□□ -1.59
NUP1YOR098C YDR262WQ12331 272 aa5.15□□□□□ -1.59
NUP1YOR098C PEP4P07267 405 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C ATP10P18496 279 aa5.14□□□□□ -1.59
NUP1YOR098C GBP2P25555 427 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
NUP1YOR098C SOR1P35497 357 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C HAM1P47119 197 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C DRN1P53255 507 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C SHR3Q02774 210 aa5.14□□□□□ -1.59
NUP1YOR098C SOR2Q07786 357 aa5.14□□□□□ -1.59
NUP1YOR098C NCE102Q12207 173 aaRIP-Chip data5.14□□□□□ -1.59not detected
NUP1YOR098C YIL177CP40434 1758 aa5.14□□□□□ -1.59
NUP1YOR098C YJL225CP40889 1758 aa5.14□□□□□ -1.59
NUP1YOR098C RRN10P38204 145 aa5.14□□□□□ -1.59
NUP1YOR098C ACO2P39533 789 aa5.14□□□□□ -1.59
NUP1YOR098C RSM23Q01163 450 aa5.14□□□□□ -1.59
NUP1YOR098C MUK1Q02866 612 aa5.14□□□□□ -1.59
NUP1YOR098C YDL057WQ07379 328 aa5.14□□□□□ -1.59
NUP1YOR098C RPL18AP0CX49 186 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C RPL18BP0CX50 186 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C MATALPHA1P0CY06 175 aa5.14□□□□□ -1.59
NUP1YOR098C HMLALPHA1P0CY07 175 aa5.14□□□□□ -1.59
NUP1YOR098C MATALPHA2P0CY08 210 aa5.14□□□□□ -1.59
NUP1YOR098C HMLALPHA2P0CY09 210 aa5.14□□□□□ -1.59
NUP1YOR098C YCP4P25349 247 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C ICL1P28240 557 aaPredicted RBP5.14□□□□□ -1.59
NUP1YOR098C RTC2P38279 296 aa5.14□□□□□ -1.59
NUP1YOR098C VBA2P38358 474 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C FET3P38993 636 aa5.14□□□□□ -1.59
NUP1YOR098C AMA1P50082 593 aa5.14□□□□□ -1.59
NUP1YOR098C RMR1P53060 241 aa5.14□□□□□ -1.59
NUP1YOR098C ENT5Q03769 411 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C EMI2Q04409 500 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C AIM45Q12480 344 aaKnown RBP5.14□□□□□ -1.59
NUP1YOR098C YOS9Q99220 542 aa5.14□□□□□ -1.59
NUP1YOR098C TDH2P00358 332 aaKnown RBP5.13□□□□□ -1.59
NUP1YOR098C TDH3P00359 332 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
NUP1YOR098C YPT1P01123 206 aaKnown RBP5.13□□□□□ -1.59
NUP1YOR098C ADE5,7P07244 802 aaKnown RBP5.13□□□□□ -1.59
NUP1YOR098C KDX1P36005 433 aa5.13□□□□□ -1.59
NUP1YOR098C YKL071WP36086 256 aa5.13□□□□□ -1.59
NUP1YOR098C MAL32P38158 584 aa5.13□□□□□ -1.59
NUP1YOR098C DBP8P38719 431 aa5.13□□□□□ -1.59
NUP1YOR098C GAT2P40209 560 aa5.13□□□□□ -1.59
NUP1YOR098C BNA3P47039 444 aaKnown RBP5.13□□□□□ -1.59
NUP1YOR098C LOH1P47055 219 aa5.13□□□□□ -1.59
NUP1YOR098C MAL12P53341 584 aa5.13□□□□□ -1.59
NUP1YOR098C MYO5Q04439 1219 aaKnown RBP5.13□□□□□ -1.59
NUP1YOR098C ORM2Q06144 216 aa5.13□□□□□ -1.59
NUP1YOR098C NSE1Q07913 336 aa5.13□□□□□ -1.59
NUP1YOR098C GET4Q12125 312 aa5.13□□□□□ -1.59
NUP1YOR098C YKL033W-AQ86ZR7 236 aa5.13□□□□□ -1.59
NUP1YOR098C MRPS28P21771 286 aa5.13□□□□□ -1.59
NUP1YOR098C DEG1P31115 442 aaKnown RBP5.13□□□□□ -1.59
NUP1YOR098C RFT1P38206 574 aaPredicted RBP5.13□□□□□ -1.59
NUP1YOR098C SNG1P46950 547 aa5.13□□□□□ -1.59
NUP1YOR098C STE24P47154 453 aa5.13□□□□□ -1.59
NUP1YOR098C NMA2P53204 395 aa5.13□□□□□ -1.59
NUP1YOR098C BET4Q00618 327 aa5.13□□□□□ -1.59
NUP1YOR098C IRC13Q08630 104 aa5.13□□□□□ -1.59
NUP1YOR098C RKI1Q12189 258 aa5.13□□□□□ -1.59
NUP1YOR098C YOR029WQ12243 111 aa5.13□□□□□ -1.59
NUP1YOR098C STE4P18851 423 aa5.12□□□□□ -1.59
NUP1YOR098C ZIP1P31111 875 aa5.12□□□□□ -1.59
NUP1YOR098C PAC11P40960 533 aa5.12□□□□□ -1.59
NUP1YOR098C TRS23Q03784 219 aa5.12□□□□□ -1.59
NUP1YOR098C ARO80Q04052 950 aa5.12□□□□□ -1.59
NUP1YOR098C YMR087WQ04299 284 aa5.12□□□□□ -1.59
NUP1YOR098C SYO1Q07395 620 aa5.12□□□□□ -1.59
NUP1YOR098C NOP12Q08208 459 aaKnown RBP5.12□□□□□ -1.59
NUP1YOR098C DNL4Q08387 944 aaPredicted RBP5.12□□□□□ -1.59
NUP1YOR098C USV1Q12132 391 aa5.12□□□□□ -1.59
NUP1YOR098C LAS17Q12446 633 aa5.12□□□□□ -1.59
NUP1YOR098C GDH1P07262 454 aaKnown RBP5.12□□□□□ -1.59
NUP1YOR098C CHO1P08456 276 aa5.12□□□□□ -1.59
NUP1YOR098C GPI12P23797 304 aa5.12□□□□□ -1.59
NUP1YOR098C RGT1P32862 1170 aa5.12□□□□□ -1.59
NUP1YOR098C MTR2P34232 184 aaKnown RBP5.12□□□□□ -1.59
NUP1YOR098C PRY1P47032 299 aa5.12□□□□□ -1.59
NUP1YOR098C RET3P53600 189 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 166.7 ms