RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C YBR255C-AQ3E776 120 aa4.41□□□□□ -1.7
EAR1YMR171C MED11Q99278 115 aa4.41□□□□□ -1.7
EAR1YMR171C Q0010Q9ZZX9 128 aa4.41□□□□□ -1.7
EAR1YMR171C MF(ALPHA)1P01149 165 aa4.41□□□□□ -1.7
EAR1YMR171C GAL80P04387 435 aa4.41□□□□□ -1.7
EAR1YMR171C TPK3P05986 398 aa4.41□□□□□ -1.7
EAR1YMR171C GPH1P06738 902 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C COS2P0CX12 379 aa4.41□□□□□ -1.7
EAR1YMR171C COS3P0CX13 379 aa4.41□□□□□ -1.7
EAR1YMR171C KGD2P19262 463 aaPredicted RBP4.41□□□□□ -1.7
EAR1YMR171C PDE1P22434 369 aa4.41□□□□□ -1.7
EAR1YMR171C CMK2P22517 447 aa4.41□□□□□ -1.7
EAR1YMR171C CTR86P25355 563 aa4.41□□□□□ -1.7
EAR1YMR171C SGF29P25554 259 aa4.41□□□□□ -1.7
EAR1YMR171C PEX3P28795 441 aa4.41□□□□□ -1.7
EAR1YMR171C SLC1P33333 303 aa4.41□□□□□ -1.7
EAR1YMR171C SKT5P34226 696 aa4.41□□□□□ -1.7
EAR1YMR171C ROT2P38138 954 aa4.41□□□□□ -1.7
EAR1YMR171C PEX18P38855 283 aa4.41□□□□□ -1.7
EAR1YMR171C YHR218WP38899 603 aa4.41□□□□□ -1.7
EAR1YMR171C FAD1P38913 306 aa4.41□□□□□ -1.7
EAR1YMR171C RBG1P39729 369 aa4.41□□□□□ -1.7
EAR1YMR171C EDC3P39998 551 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C YJL070CP40361 888 aa4.41□□□□□ -1.7
EAR1YMR171C CDC1P40986 491 aa4.41□□□□□ -1.7
EAR1YMR171C SKP2P42843 763 aa4.41□□□□□ -1.7
EAR1YMR171C COS4P43542 379 aa4.41□□□□□ -1.7
EAR1YMR171C KEL2P50090 882 aa4.41□□□□□ -1.7
EAR1YMR171C APM1Q00776 475 aaPredicted RBP4.41□□□□□ -1.7
EAR1YMR171C STP1Q00947 519 aa4.41□□□□□ -1.7
EAR1YMR171C YVH1Q02256 364 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C SWP1Q02795 286 aa4.41□□□□□ -1.7
EAR1YMR171C RSN1Q03516 953 aa4.41□□□□□ -1.7
EAR1YMR171C TAF12Q03761 539 aa4.41□□□□□ -1.7
EAR1YMR171C GPI17Q04080 534 aa4.41□□□□□ -1.7
EAR1YMR171C RAD33Q04231 177 aa4.41□□□□□ -1.7
EAR1YMR171C SPG3Q04398 127 aaPredicted RBP4.41□□□□□ -1.7
EAR1YMR171C ERB1Q04660 807 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C HRD3Q05787 833 aa4.41□□□□□ -1.7
EAR1YMR171C SWC7Q06707 132 aa4.41□□□□□ -1.7
EAR1YMR171C LDB18Q07887 179 aa4.41□□□□□ -1.7
EAR1YMR171C YOR389WQ08912 624 aa4.41□□□□□ -1.7
EAR1YMR171C PGC1Q08959 321 aa4.41□□□□□ -1.7
EAR1YMR171C GPM2Q12008 311 aa4.41□□□□□ -1.7
EAR1YMR171C LCB4Q12246 624 aa4.41□□□□□ -1.7
EAR1YMR171C PFK27Q12471 397 aaPredicted RBP4.41□□□□□ -1.7
EAR1YMR171C YPL247CQ12523 523 aa4.41□□□□□ -1.7
EAR1YMR171C YOL159C-AQ3E769 90 aa4.41□□□□□ -1.7
EAR1YMR171C AFI1Q99222 893 aa4.41□□□□□ -1.7
EAR1YMR171C ARG3P05150 338 aa4.4□□□□□ -1.71
EAR1YMR171C POL30P15873 258 aaKnown RBP4.4□□□□□ -1.71
EAR1YMR171C UBA1P22515 1024 aaKnown RBP4.4□□□□□ -1.71
EAR1YMR171C CIN8P27895 1000 aa4.4□□□□□ -1.71
EAR1YMR171C UBC8P28263 218 aa4.4□□□□□ -1.71
EAR1YMR171C NUP2P32499 720 aa4.4□□□□□ -1.71
EAR1YMR171C TKL2P33315 681 aa4.4□□□□□ -1.71
EAR1YMR171C FRE2P36033 711 aa4.4□□□□□ -1.71
EAR1YMR171C CAF4P36130 643 aa4.4□□□□□ -1.71
EAR1YMR171C EGD2P38879 174 aaKnown RBP4.4□□□□□ -1.71
EAR1YMR171C PAC2P39937 518 aa4.4□□□□□ -1.71
EAR1YMR171C PSP1P50896 841 aaKnown RBP4.4□□□□□ -1.71
EAR1YMR171C SCS3P53012 380 aa4.4□□□□□ -1.71
EAR1YMR171C IMO32P53219 342 aa4.4□□□□□ -1.71
EAR1YMR171C YNR068CP53754 272 aa4.4□□□□□ -1.71
EAR1YMR171C TOF2Q02208 771 aa4.4□□□□□ -1.71
EAR1YMR171C SPP2Q02521 185 aa4.4□□□□□ -1.71
EAR1YMR171C TLG1Q03322 224 aa4.4□□□□□ -1.71
EAR1YMR171C YML053CQ04978 212 aa4.4□□□□□ -1.71
EAR1YMR171C TSR2Q06672 205 aaKnown RBP4.4□□□□□ -1.71
EAR1YMR171C FMP45Q07651 309 aa4.4□□□□□ -1.71
EAR1YMR171C RKM1Q08961 583 aaPredicted RBP4.4□□□□□ -1.71
EAR1YMR171C NUS1Q12063 375 aa4.4□□□□□ -1.71
EAR1YMR171C YLR049CQ12110 428 aa4.4□□□□□ -1.71
EAR1YMR171C COX5AP00424 153 aa4.39□□□□□ -1.71
EAR1YMR171C SUC2P00724 532 aa4.39□□□□□ -1.71
EAR1YMR171C MET17P06106 444 aa4.39□□□□□ -1.71
EAR1YMR171C SEC53P07283 254 aaKnown RBP4.39□□□□□ -1.71
EAR1YMR171C GUK1P15454 187 aaKnown RBP4.39□□□□□ -1.71
EAR1YMR171C RSA4P25382 515 aaKnown RBP4.39□□□□□ -1.71
EAR1YMR171C SYN8P31377 255 aa4.39□□□□□ -1.71
EAR1YMR171C PRP21P32524 280 aaPredicted RBP4.39□□□□□ -1.71
EAR1YMR171C PTM1P32857 523 aa4.39□□□□□ -1.71
EAR1YMR171C MRPL17P36528 281 aa4.39□□□□□ -1.71
EAR1YMR171C FTH1P38310 465 aa4.39□□□□□ -1.71
EAR1YMR171C AXL2P38928 823 aa4.39□□□□□ -1.71
EAR1YMR171C KRE29P40026 464 aa4.39□□□□□ -1.71
EAR1YMR171C LAS21P40367 830 aa4.39□□□□□ -1.71
EAR1YMR171C GCD10P41814 478 aa4.39□□□□□ -1.71
EAR1YMR171C DLD2P46681 530 aaKnown RBP4.39□□□□□ -1.71
EAR1YMR171C TOM22P49334 152 aa4.39□□□□□ -1.71
EAR1YMR171C COG1P53079 417 aa4.39□□□□□ -1.71
EAR1YMR171C ORM1P53224 222 aa4.39□□□□□ -1.71
EAR1YMR171C TIM13P53299 105 aa4.39□□□□□ -1.71
EAR1YMR171C ARE2P53629 642 aaKnown RBP4.39□□□□□ -1.71
EAR1YMR171C GAS3Q03655 524 aa4.39□□□□□ -1.71
EAR1YMR171C YDR131CQ03899 556 aa4.39□□□□□ -1.71
EAR1YMR171C MGR3Q04472 501 aa4.39□□□□□ -1.71
EAR1YMR171C ARP10Q04549 284 aa4.39□□□□□ -1.71
EAR1YMR171C GPI11Q06636 219 aa4.39□□□□□ -1.71
EAR1YMR171C YOL159CQ08300 171 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms