RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C EGT2P42835 1041 aa2.33□□□□□ -2.04
UBX4YMR067C LCB3P47013 409 aa2.33□□□□□ -2.04
UBX4YMR067C FLC3P53121 802 aa2.33□□□□□ -2.04
UBX4YMR067C ARX1Q03862 593 aaKnown RBP2.33□□□□□ -2.04
UBX4YMR067C PRM6Q04705 352 aa2.33□□□□□ -2.04
UBX4YMR067C YPR091CQ06833 770 aa2.33□□□□□ -2.04
UBX4YMR067C DIS3Q08162 1001 aaKnown RBP2.33□□□□□ -2.04
UBX4YMR067C YRF1-4O13559 1382 aa2.33□□□□□ -2.04
UBX4YMR067C IMA3P0CW40 589 aa2.32□□□□□ -2.04
UBX4YMR067C IMA4P0CW41 589 aa2.32□□□□□ -2.04
UBX4YMR067C DPH5P32469 300 aaPredicted RBP2.32□□□□□ -2.04
UBX4YMR067C GPI18P38211 433 aa2.32□□□□□ -2.04
UBX4YMR067C YHK8P38776 514 aa2.32□□□□□ -2.04
UBX4YMR067C YPS6P40583 537 aa2.32□□□□□ -2.04
UBX4YMR067C TPS1Q00764 495 aaKnown RBP2.32□□□□□ -2.04
UBX4YMR067C STD1Q02794 444 aa2.32□□□□□ -2.04
UBX4YMR067C MMT1Q03218 510 aa2.32□□□□□ -2.04
UBX4YMR067C DCS1Q06151 350 aa2.32□□□□□ -2.04
UBX4YMR067C IMA2Q08295 589 aa2.32□□□□□ -2.04
UBX4YMR067C RUP1Q12242 671 aa2.32□□□□□ -2.04
UBX4YMR067C NAG1Q8TGN9 163 aa2.32□□□□□ -2.04
UBX4YMR067C PIS1P06197 220 aaKnown RBP2.31□□□□□ -2.04
UBX4YMR067C CAP2P13517 287 aa2.31□□□□□ -2.04
UBX4YMR067C URA4P20051 364 aa2.31□□□□□ -2.04
UBX4YMR067C EXG1P23776 448 aaKnown RBP2.31□□□□□ -2.04
UBX4YMR067C BRF1P29056 596 aa2.31□□□□□ -2.04
UBX4YMR067C NDE1P40215 560 aa2.31□□□□□ -2.04
UBX4YMR067C TOS3P43637 560 aa2.31□□□□□ -2.04
UBX4YMR067C KTR6P54070 446 aa2.31□□□□□ -2.04
UBX4YMR067C SKI8Q02793 397 aaPredicted RBP2.31□□□□□ -2.04
UBX4YMR067C TDA1Q03533 586 aa2.31□□□□□ -2.04
UBX4YMR067C YMR130WQ04223 302 aa2.31□□□□□ -2.04
UBX4YMR067C SCM3Q12334 223 aa2.31□□□□□ -2.04
UBX4YMR067C NCA2Q12374 616 aa2.31□□□□□ -2.04
UBX4YMR067C TY1B-AO13527 1196 aaKnown RBP2.3□□□□□ -2.04
UBX4YMR067C ADH1P00330 348 aaKnown RBP2.3□□□□□ -2.04
UBX4YMR067C DEP1P31385 405 aa2.3□□□□□ -2.04
UBX4YMR067C AIP1P46680 615 aaKnown RBP2.3□□□□□ -2.04
UBX4YMR067C YGR018CP53211 109 aa2.3□□□□□ -2.04
UBX4YMR067C RPN9Q04062 393 aaKnown RBP2.3□□□□□ -2.04
UBX4YMR067C SNT309Q06091 175 aaPredicted RBP2.3□□□□□ -2.04
UBX4YMR067C YDL114WQ07530 308 aa2.3□□□□□ -2.04
UBX4YMR067C FOL3Q12676 427 aaPredicted RBP2.3□□□□□ -2.04
UBX4YMR067C ISN1Q99312 450 aa2.3□□□□□ -2.04
UBX4YMR067C BI3Q9ZZW7 517 aa2.3□□□□□ -2.04
UBX4YMR067C ZRC1P20107 442 aa2.29□□□□□ -2.04
UBX4YMR067C COX13P32799 129 aa2.29□□□□□ -2.04
UBX4YMR067C BMT2P38278 337 aa2.29□□□□□ -2.04
UBX4YMR067C YNL208WP40159 199 aaKnown RBP2.29□□□□□ -2.04
UBX4YMR067C GAT2P40209 560 aa2.29□□□□□ -2.04
UBX4YMR067C TOM22P49334 152 aa2.29□□□□□ -2.04
UBX4YMR067C YGL262WP53054 175 aa2.29□□□□□ -2.04
UBX4YMR067C YIP5P53108 310 aa2.29□□□□□ -2.04
UBX4YMR067C YGR250CP53316 781 aaKnown RBP2.29□□□□□ -2.04
UBX4YMR067C ACL4Q03771 387 aa2.29□□□□□ -2.04
UBX4YMR067C YLR287CQ05881 355 aa2.29□□□□□ -2.04
UBX4YMR067C MFG1Q07684 458 aa2.29□□□□□ -2.04
UBX4YMR067C HTZ1Q12692 134 aaKnown RBP2.29□□□□□ -2.04
UBX4YMR067C CDC31P06704 161 aaKnown RBP2.28□□□□□ -2.04
UBX4YMR067C YCR051WP25631 222 aa2.28□□□□□ -2.04
UBX4YMR067C YEF1P32622 495 aa2.28□□□□□ -2.04
UBX4YMR067C DTR1P38125 572 aa2.28□□□□□ -2.04
UBX4YMR067C PGU1P47180 361 aa2.28□□□□□ -2.04
UBX4YMR067C RRP46P53256 223 aaPredicted RBP2.28□□□□□ -2.04
UBX4YMR067C RPT4P53549 437 aaKnown RBP2.28□□□□□ -2.04
UBX4YMR067C COS1P53822 381 aa2.28□□□□□ -2.04
UBX4YMR067C OCA2P53949 197 aa2.28□□□□□ -2.04
UBX4YMR067C YPL107WQ02873 248 aa2.28□□□□□ -2.04
UBX4YMR067C HOT1Q03213 719 aa2.28□□□□□ -2.04
UBX4YMR067C ROY1Q04847 553 aa2.28□□□□□ -2.04
UBX4YMR067C MCH1Q07376 486 aa2.28□□□□□ -2.04
UBX4YMR067C RAX2Q12465 1220 aa2.28□□□□□ -2.04
UBX4YMR067C MTR10Q99189 972 aa2.28□□□□□ -2.04
UBX4YMR067C COX3P00420 269 aa2.27□□□□□ -2.05
UBX4YMR067C PAB1P04147 577 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
UBX4YMR067C RAD5P32849 1169 aaPredicted RBP2.27□□□□□ -2.05
UBX4YMR067C MRPL27P36526 146 aaPredicted RBP2.27□□□□□ -2.05
UBX4YMR067C OLA1P38219 394 aaKnown RBP2.27□□□□□ -2.05
UBX4YMR067C SEC9P40357 651 aa2.27□□□□□ -2.05
UBX4YMR067C GPD2P41911 440 aaKnown RBP2.27□□□□□ -2.05
UBX4YMR067C YFL012WP43580 148 aa2.27□□□□□ -2.05
UBX4YMR067C IGD1P43598 195 aa2.27□□□□□ -2.05
UBX4YMR067C VHT1P53241 593 aa2.27□□□□□ -2.05
UBX4YMR067C PRP42Q03776 544 aaKnown RBP2.27□□□□□ -2.05
UBX4YMR067C PIN3Q06449 215 aa2.27□□□□□ -2.05
UBX4YMR067C YCR024C-BQ3E7Z8 88 aa2.27□□□□□ -2.05
UBX4YMR067C POM152P39685 1337 aa2.26□□□□□ -2.05
UBX4YMR067C STE7P06784 515 aa2.26□□□□□ -2.05
UBX4YMR067C ATP1P07251 545 aaKnown RBP2.26□□□□□ -2.05
UBX4YMR067C FUN26P31381 517 aa2.26□□□□□ -2.05
UBX4YMR067C ZUO1P32527 433 aaKnown RBP2.26□□□□□ -2.05
UBX4YMR067C LSM5P40089 93 aaKnown RBP2.26□□□□□ -2.05
UBX4YMR067C IGO1P53897 168 aa2.26□□□□□ -2.05
UBX4YMR067C YLR345WQ06137 509 aa2.26□□□□□ -2.05
UBX4YMR067C MMR1Q06324 491 aa2.26□□□□□ -2.05
UBX4YMR067C YPS3Q12303 508 aa2.26□□□□□ -2.05
UBX4YMR067C PRM7Q12459 698 aa2.26□□□□□ -2.05
UBX4YMR067C AFI1Q99222 893 aa2.26□□□□□ -2.05
UBX4YMR067C DST1P07273 309 aa2.25□□□□□ -2.05
UBX4YMR067C RPN12P32496 274 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms