RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C TRM112P53738 135 aaPredicted RBP1.21□□□□□ -2.22
NUP188YML103C RPL15BP54780 204 aaPredicted RBP1.21□□□□□ -2.22
NUP188YML103C YDR286CQ05530 114 aa1.21□□□□□ -2.22
NUP188YML103C RAX1Q08760 435 aa1.21□□□□□ -2.22
NUP188YML103C BSC1Q12140 328 aa1.21□□□□□ -2.22
NUP188YML103C ORT1Q12375 292 aa1.21□□□□□ -2.22
NUP188YML103C YOP1Q12402 180 aa1.21□□□□□ -2.22
NUP188YML103C TPK3P05986 398 aa1.21□□□□□ -2.22
NUP188YML103C RPL12AP0CX53 165 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C RPL12BP0CX54 165 aa1.21□□□□□ -2.22
NUP188YML103C YCP4P25349 247 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C PSO2P30620 661 aa1.21□□□□□ -2.22
NUP188YML103C MSK1P32048 576 aa1.21□□□□□ -2.22
NUP188YML103C GLC7P32598 312 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C YEF1P32622 495 aa1.21□□□□□ -2.22
NUP188YML103C SKN1P33336 771 aa1.21□□□□□ -2.22
NUP188YML103C MCR1P36060 302 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C YKR015CP36111 568 aa1.21□□□□□ -2.22
NUP188YML103C MIX23P38162 196 aa1.21□□□□□ -2.22
NUP188YML103C QDR3P38227 689 aa1.21□□□□□ -2.22
NUP188YML103C PES4P39684 611 aa1.21□□□□□ -2.22
NUP188YML103C YIL169CP40442 995 aa1.21□□□□□ -2.22
NUP188YML103C COX16P47081 118 aa1.21□□□□□ -2.22
NUP188YML103C PKP2P53170 491 aa1.21□□□□□ -2.22
NUP188YML103C PCP1P53259 346 aa1.21□□□□□ -2.22
NUP188YML103C ESBP6P53918 673 aa1.21□□□□□ -2.22
NUP188YML103C OCA2P53949 197 aa1.21□□□□□ -2.22
NUP188YML103C UTP6Q02354 440 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C UBX2Q04228 584 aa1.21□□□□□ -2.22
NUP188YML103C VPS20Q04272 221 aa1.21□□□□□ -2.22
NUP188YML103C APC4Q04601 652 aa1.21□□□□□ -2.22
NUP188YML103C SPH1Q06160 661 aa1.21□□□□□ -2.22
NUP188YML103C YDL114WQ07530 308 aa1.21□□□□□ -2.22
NUP188YML103C SMC5Q08204 1093 aa1.21□□□□□ -2.22
NUP188YML103C SLF1Q12034 447 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C PSY3Q12318 242 aa1.21□□□□□ -2.22
NUP188YML103C PCL9Q12477 304 aa1.21□□□□□ -2.22
NUP188YML103C TY1B-AO13527 1196 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C YFL068WP0CX99 160 aa1.21□□□□□ -2.22
NUP188YML103C YLL066W-AP0CY00 160 aa1.21□□□□□ -2.22
NUP188YML103C YLL067W-AP0CY01 160 aa1.21□□□□□ -2.22
NUP188YML103C CLN3P13365 580 aa1.21□□□□□ -2.22
NUP188YML103C CDC23P16522 626 aa1.21□□□□□ -2.22
NUP188YML103C RPB5P20434 215 aa1.21□□□□□ -2.22
NUP188YML103C DCC1P25559 380 aa1.21□□□□□ -2.22
NUP188YML103C ERG9P29704 444 aa1.21□□□□□ -2.22
NUP188YML103C PFF1P38244 976 aa1.21□□□□□ -2.22
NUP188YML103C YER079WP40052 210 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C RTT101P47050 842 aa1.21□□□□□ -2.22
NUP188YML103C KEL2P50090 882 aa1.21□□□□□ -2.22
NUP188YML103C MTQ1P53944 314 aa1.21□□□□□ -2.22
NUP188YML103C MDM36Q06820 579 aa1.21□□□□□ -2.22
NUP188YML103C YLR108CQ12259 485 aa1.21□□□□□ -2.22
NUP188YML103C MES1P00958 751 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C YCL068CP25593 260 aa1.2□□□□□ -2.22
NUP188YML103C VAM7P32912 316 aa1.2□□□□□ -2.22
NUP188YML103C PAD1P33751 242 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
NUP188YML103C MTC6P38849 526 aa1.2□□□□□ -2.22
NUP188YML103C TOS3P43637 560 aa1.2□□□□□ -2.22
NUP188YML103C YDL186WP48568 277 aa1.2□□□□□ -2.22
NUP188YML103C DRN1P53255 507 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C BCH1Q05029 724 aa1.2□□□□□ -2.22
NUP188YML103C MSC3Q05812 728 aa1.2□□□□□ -2.22
NUP188YML103C YLR297WQ05899 129 aa1.2□□□□□ -2.22
NUP188YML103C ESA1Q08649 445 aa1.2□□□□□ -2.22
NUP188YML103C SRL1Q08673 210 aa1.2□□□□□ -2.22
NUP188YML103C RUD3Q12234 484 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C MDY2Q12285 212 aa1.2□□□□□ -2.22
NUP188YML103C GLE1Q12315 538 aa1.2□□□□□ -2.22
NUP188YML103C PFK27Q12471 397 aaPredicted RBP1.2□□□□□ -2.22
NUP188YML103C PIS1P06197 220 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C NAT1P12945 854 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C CBS2P14905 389 aa1.2□□□□□ -2.22
NUP188YML103C MSG5P38590 489 aa1.2□□□□□ -2.22
NUP188YML103C MNN9P39107 395 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C RTT105P40063 208 aa1.2□□□□□ -2.22
NUP188YML103C YJL213WP40896 331 aa1.2□□□□□ -2.22
NUP188YML103C VOA1P53262 265 aa1.2□□□□□ -2.22
NUP188YML103C MSO1P53604 210 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C YMR027WQ04371 470 aa1.2□□□□□ -2.22
NUP188YML103C LDS2Q08218 356 aa1.2□□□□□ -2.22
NUP188YML103C NCA2Q12374 616 aa1.2□□□□□ -2.22
NUP188YML103C FUN26P31381 517 aa1.2□□□□□ -2.22
NUP188YML103C YMR262WP38430 313 aa1.2□□□□□ -2.22
NUP188YML103C GND1P38720 489 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C MNL1P38888 796 aa1.2□□□□□ -2.22
NUP188YML103C FHL1P39521 936 aa1.2□□□□□ -2.22
NUP188YML103C YIL029CP40538 142 aa1.2□□□□□ -2.22
NUP188YML103C INA22P40576 216 aa1.2□□□□□ -2.22
NUP188YML103C IDP2P41939 412 aa1.2□□□□□ -2.22
NUP188YML103C YDR262WQ12331 272 aa1.2□□□□□ -2.22
NUP188YML103C JID1Q12350 301 aa1.2□□□□□ -2.22
NUP188YML103C CSR2Q12734 1121 aa1.2□□□□□ -2.22
NUP188YML103C RPL24AP04449 155 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C STE7P06784 515 aa1.2□□□□□ -2.22
NUP188YML103C RPC40P07703 335 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C RNA1P11745 407 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C ARO3P14843 370 aaKnown RBP1.2□□□□□ -2.22
NUP188YML103C DPH2P32461 534 aa1.2□□□□□ -2.22
NUP188YML103C RGT1P32862 1170 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms