RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W MTR10Q99189 972 aa3.02□□□□□ -1.93
SMD2YLR275W EXG1P23776 448 aaKnown RBP3.01□□□□□ -1.93
SMD2YLR275W URA7P28274 579 aaKnown RBP3.01□□□□□ -1.93
SMD2YLR275W DPH5P32469 300 aaPredicted RBP3.01□□□□□ -1.93
SMD2YLR275W SLM4P38247 162 aa3.01□□□□□ -1.93
SMD2YLR275W YPS6P40583 537 aa3.01□□□□□ -1.93
SMD2YLR275W CAK1P43568 368 aaPredicted RBP3.01□□□□□ -1.93
SMD2YLR275W LCB3P47013 409 aa3.01□□□□□ -1.93
SMD2YLR275W AIM24P47127 394 aa3.01□□□□□ -1.93
SMD2YLR275W APJ1P53940 528 aa3.01□□□□□ -1.93
SMD2YLR275W SMC5Q08204 1093 aa3.01□□□□□ -1.93
SMD2YLR275W CEX1Q12453 761 aa3.01□□□□□ -1.93
SMD2YLR275W CAP2P13517 287 aa3□□□□□ -1.93
SMD2YLR275W BAT1P38891 393 aaKnown RBP3□□□□□ -1.93
SMD2YLR275W GAT2P40209 560 aa3□□□□□ -1.93
SMD2YLR275W MAM33P40513 266 aa3□□□□□ -1.93
SMD2YLR275W HAC1P41546 238 aa3□□□□□ -1.93
SMD2YLR275W EGT2P42835 1041 aa3□□□□□ -1.93
SMD2YLR275W TOS3P43637 560 aa3□□□□□ -1.93
SMD2YLR275W TOM22P49334 152 aa3□□□□□ -1.93
SMD2YLR275W BNS1P50084 137 aa3□□□□□ -1.93
SMD2YLR275W CRH1P53301 507 aa3□□□□□ -1.93
SMD2YLR275W YMR102CQ03177 834 aa3□□□□□ -1.93
SMD2YLR275W SPC19Q03954 165 aa3□□□□□ -1.93
SMD2YLR275W RPN9Q04062 393 aaKnown RBP3□□□□□ -1.93
SMD2YLR275W ERB1Q04660 807 aaKnown RBP3□□□□□ -1.93
SMD2YLR275W EAF3Q12432 401 aa3□□□□□ -1.93
SMD2YLR275W ERV1P27882 189 aa2.99□□□□□ -1.93
SMD2YLR275W IES6P32617 166 aa2.99□□□□□ -1.93
SMD2YLR275W ATG18P43601 500 aa2.99□□□□□ -1.93
SMD2YLR275W ALF1P53904 254 aa2.99□□□□□ -1.93
SMD2YLR275W YET2Q04210 160 aa2.99□□□□□ -1.93
SMD2YLR275W LOT6Q07923 191 aa2.99□□□□□ -1.93
SMD2YLR275W VPS54Q12071 889 aa2.99□□□□□ -1.93
SMD2YLR275W PSK1P31374 1356 aa2.99□□□□□ -1.93
SMD2YLR275W CYS4P32582 507 aaKnown RBP2.98□□□□□ -1.93
SMD2YLR275W HEL1P36113 551 aa2.98□□□□□ -1.93
SMD2YLR275W ASC1P38011 319 aaKnown RBP2.98□□□□□ -1.93
SMD2YLR275W YHK8P38776 514 aa2.98□□□□□ -1.93
SMD2YLR275W YER186CP40101 306 aa2.98□□□□□ -1.93
SMD2YLR275W VHS2P40463 436 aa2.98□□□□□ -1.93
SMD2YLR275W RNY1Q02933 434 aaKnown RBP2.98□□□□□ -1.93
SMD2YLR275W TDA1Q03533 586 aa2.98□□□□□ -1.93
SMD2YLR275W PRP42Q03776 544 aaKnown RBP2.98□□□□□ -1.93
SMD2YLR275W VHS1Q03785 461 aa2.98□□□□□ -1.93
SMD2YLR275W YDR131CQ03899 556 aa2.98□□□□□ -1.93
SMD2YLR275W RUP1Q12242 671 aa2.98□□□□□ -1.93
SMD2YLR275W YBL111CQ3E7Y5 667 aa2.98□□□□□ -1.93
SMD2YLR275W PIS1P06197 220 aaKnown RBP2.97□□□□□ -1.93
SMD2YLR275W ARO3P14843 370 aaKnown RBP2.97□□□□□ -1.93
SMD2YLR275W PDX1P16451 410 aa2.97□□□□□ -1.93
SMD2YLR275W CLB1P24868 471 aa2.97□□□□□ -1.93
SMD2YLR275W CDC50P25656 391 aa2.97□□□□□ -1.93
SMD2YLR275W YKL097CP34245 136 aa2.97□□□□□ -1.93
SMD2YLR275W OM14P38325 134 aa2.97□□□□□ -1.93
SMD2YLR275W PTI1P39927 425 aaPredicted RBP2.97□□□□□ -1.93
SMD2YLR275W YER079WP40052 210 aaKnown RBP2.97□□□□□ -1.93
SMD2YLR275W COS1P53822 381 aa2.97□□□□□ -1.93
SMD2YLR275W COX4P04037 155 aa2.96□□□□□ -1.94
SMD2YLR275W DST1P07273 309 aa2.96□□□□□ -1.94
SMD2YLR275W RPC53P25441 422 aa2.96□□□□□ -1.94
SMD2YLR275W ANR2P36090 516 aaPredicted RBP2.96□□□□□ -1.94
SMD2YLR275W OLA1P38219 394 aaKnown RBP2.96□□□□□ -1.94
SMD2YLR275W SEO1P39709 593 aa2.96□□□□□ -1.94
SMD2YLR275W SER3P40054 469 aa2.96□□□□□ -1.94
SMD2YLR275W CHS6P40955 746 aa2.96□□□□□ -1.94
SMD2YLR275W RRP46P53256 223 aaPredicted RBP2.96□□□□□ -1.94
SMD2YLR275W CLD1P53264 445 aa2.96□□□□□ -1.94
SMD2YLR275W MKC7P53379 596 aa2.96□□□□□ -1.94
SMD2YLR275W MRPS16Q02608 121 aa2.96□□□□□ -1.94
SMD2YLR275W PRM6Q04705 352 aa2.96□□□□□ -1.94
SMD2YLR275W DNL4Q08387 944 aaPredicted RBP2.96□□□□□ -1.94
SMD2YLR275W YPQ1Q12010 308 aa2.96□□□□□ -1.94
SMD2YLR275W AEP3Q12089 606 aa2.96□□□□□ -1.94
SMD2YLR275W NAG1Q8TGN9 163 aa2.96□□□□□ -1.94
SMD2YLR275W ATP1P07251 545 aaKnown RBP2.95□□□□□ -1.94
SMD2YLR275W YEF1P32622 495 aa2.95□□□□□ -1.94
SMD2YLR275W MPE1P35728 441 aaKnown RBP2.95□□□□□ -1.94
SMD2YLR275W MRPS9P38120 278 aa2.95□□□□□ -1.94
SMD2YLR275W STN1P38960 494 aa2.95□□□□□ -1.94
SMD2YLR275W TCB2P48231 1178 aa2.95□□□□□ -1.94
SMD2YLR275W MFG1Q07684 458 aa2.95□□□□□ -1.94
SMD2YLR275W POM152P39685 1337 aa2.94□□□□□ -1.94
SMD2YLR275W CDC21P06785 304 aa2.94□□□□□ -1.94
SMD2YLR275W CPR2P23285 205 aa2.94□□□□□ -1.94
SMD2YLR275W SKN1P33336 771 aa2.94□□□□□ -1.94
SMD2YLR275W ZTA1P38230 334 aaKnown RBP2.94□□□□□ -1.94
SMD2YLR275W YNL208WP40159 199 aaKnown RBP2.94□□□□□ -1.94
SMD2YLR275W MMF1P40185 145 aaKnown RBP2.94□□□□□ -1.94
SMD2YLR275W RMT2Q03305 412 aa2.94□□□□□ -1.94
SMD2YLR275W ECM11Q04110 302 aa2.94□□□□□ -1.94
SMD2YLR275W YCR024C-BQ3E7Z8 88 aa2.94□□□□□ -1.94
SMD2YLR275W HSP104P31539 908 aaKnown RBP2.93□□□□□ -1.94
SMD2YLR275W STP2P38704 541 aa2.93□□□□□ -1.94
SMD2YLR275W ZIM17P42844 174 aa2.93□□□□□ -1.94
SMD2YLR275W SPR6Q01684 191 aa2.93□□□□□ -1.94
SMD2YLR275W HTZ1Q12692 134 aaKnown RBP2.93□□□□□ -1.94
SMD2YLR275W PAB1P04147 577 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94 RIP-Chip
SMD2YLR275W SSC1P0CS90 654 aaKnown RBP2.92□□□□□ -1.94
SMD2YLR275W ALG1P16661 449 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms