RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YMR155WQ03795 547 aa2.58□□□□□ -2
ATG38YLR211C ROY1Q04847 553 aa2.58□□□□□ -2
ATG38YLR211C BUG1Q12191 341 aa2.58□□□□□ -2
ATG38YLR211C YRF1-4O13559 1382 aa2.58□□□□□ -2
ATG38YLR211C CBP6P07253 162 aaPredicted RBP2.57□□□□□ -2
ATG38YLR211C SRV2P17555 526 aaKnown RBP2.57□□□□□ -2
ATG38YLR211C CDC50P25656 391 aa2.57□□□□□ -2
ATG38YLR211C YBR056WP38081 501 aa2.57□□□□□ -2
ATG38YLR211C MRPS9P38120 278 aa2.57□□□□□ -2
ATG38YLR211C NOC2P39744 710 aaKnown RBP2.57□□□□□ -2
ATG38YLR211C BNI5P53890 448 aaKnown RBP2.57□□□□□ -2
ATG38YLR211C STD1Q02794 444 aa2.57□□□□□ -2
ATG38YLR211C ACL4Q03771 387 aa2.57□□□□□ -2
ATG38YLR211C DON1Q05610 365 aa2.57□□□□□ -2
ATG38YLR211C PRB1P09232 635 aa2.56□□□□□ -2
ATG38YLR211C ARO3P14843 370 aaKnown RBP2.56□□□□□ -2
ATG38YLR211C YCR051WP25631 222 aa2.56□□□□□ -2
ATG38YLR211C MMS4P38257 691 aa2.56□□□□□ -2
ATG38YLR211C TIM17P39515 158 aa2.56□□□□□ -2
ATG38YLR211C AIM24P47127 394 aa2.56□□□□□ -2
ATG38YLR211C YPS5P53057 165 aa2.56□□□□□ -2
ATG38YLR211C YMR102CQ03177 834 aa2.56□□□□□ -2
ATG38YLR211C DCS1Q06151 350 aa2.56□□□□□ -2
ATG38YLR211C TSR2Q06672 205 aaKnown RBP2.56□□□□□ -2
ATG38YLR211C SMC5Q08204 1093 aa2.56□□□□□ -2
ATG38YLR211C NCA2Q12374 616 aa2.56□□□□□ -2
ATG38YLR211C NAG1Q8TGN9 163 aa2.56□□□□□ -2
ATG38YLR211C CDC31P06704 161 aaKnown RBP2.55□□□□□ -2
ATG38YLR211C BRF1P29056 596 aa2.55□□□□□ -2
ATG38YLR211C MRPL27P36526 146 aaPredicted RBP2.55□□□□□ -2
ATG38YLR211C TOS3P43637 560 aa2.55□□□□□ -2
ATG38YLR211C ECM11Q04110 302 aa2.55□□□□□ -2
ATG38YLR211C YMR130WQ04223 302 aa2.55□□□□□ -2
ATG38YLR211C YLR287CQ05881 355 aa2.55□□□□□ -2
ATG38YLR211C MMR1Q06324 491 aa2.55□□□□□ -2
ATG38YLR211C TFB1P32776 642 aa2.54□□□□□ -2
ATG38YLR211C NFU1P32860 256 aa2.54□□□□□ -2
ATG38YLR211C HEL1P36113 551 aa2.54□□□□□ -2
ATG38YLR211C BMT2P38278 337 aa2.54□□□□□ -2
ATG38YLR211C STP2P38704 541 aa2.54□□□□□ -2
ATG38YLR211C HAC1P41546 238 aa2.54□□□□□ -2
ATG38YLR211C TOM22P49334 152 aa2.54□□□□□ -2
ATG38YLR211C MKC7P53379 596 aa2.54□□□□□ -2
ATG38YLR211C PIN3Q06449 215 aa2.54□□□□□ -2
ATG38YLR211C EAF3Q12432 401 aa2.54□□□□□ -2
ATG38YLR211C AFI1Q99222 893 aa2.54□□□□□ -2
ATG38YLR211C SSC1P0CS90 654 aaKnown RBP2.53□□□□□ -2
ATG38YLR211C HOM3P10869 527 aa2.53□□□□□ -2
ATG38YLR211C URA7P28274 579 aaKnown RBP2.53□□□□□ -2
ATG38YLR211C GAT2P40209 560 aa2.53□□□□□ -2
ATG38YLR211C RPT4P53549 437 aaKnown RBP2.53□□□□□ -2
ATG38YLR211C MDM1Q01846 1127 aa2.53□□□□□ -2
ATG38YLR211C SKI8Q02793 397 aaPredicted RBP2.53□□□□□ -2
ATG38YLR211C HOT1Q03213 719 aa2.53□□□□□ -2
ATG38YLR211C MMT1Q03218 510 aa2.53□□□□□ -2
ATG38YLR211C RPN9Q04062 393 aaKnown RBP2.53□□□□□ -2
ATG38YLR211C INH1P01097 85 aa2.52□□□□□ -2.01
ATG38YLR211C ERV1P27882 189 aa2.52□□□□□ -2.01
ATG38YLR211C ATP3P38077 311 aaKnown RBP2.52□□□□□ -2.01
ATG38YLR211C GPI18P38211 433 aa2.52□□□□□ -2.01
ATG38YLR211C SER3P40054 469 aa2.52□□□□□ -2.01
ATG38YLR211C YGL262WP53054 175 aa2.52□□□□□ -2.01
ATG38YLR211C ZRC1P20107 442 aa2.51□□□□□ -2.01
ATG38YLR211C ADK2P26364 225 aa2.51□□□□□ -2.01
ATG38YLR211C CYS4P32582 507 aaKnown RBP2.51□□□□□ -2.01
ATG38YLR211C ASC1P38011 319 aaKnown RBP2.51□□□□□ -2.01
ATG38YLR211C SLM4P38247 162 aa2.51□□□□□ -2.01
ATG38YLR211C PFS1P38872 237 aa2.51□□□□□ -2.01
ATG38YLR211C MAM33P40513 266 aa2.51□□□□□ -2.01
ATG38YLR211C TOS2P50078 622 aa2.51□□□□□ -2.01
ATG38YLR211C ATP22P50273 684 aaPredicted RBP2.51□□□□□ -2.01
ATG38YLR211C FLC3P53121 802 aa2.51□□□□□ -2.01
ATG38YLR211C CLD1P53264 445 aa2.51□□□□□ -2.01
ATG38YLR211C TPS1Q00764 495 aaKnown RBP2.51□□□□□ -2.01
ATG38YLR211C YDR131CQ03899 556 aa2.51□□□□□ -2.01
ATG38YLR211C SCM3Q12334 223 aa2.51□□□□□ -2.01
ATG38YLR211C SFI1Q12369 946 aa2.51□□□□□ -2.01
ATG38YLR211C ERP4Q12450 207 aa2.51□□□□□ -2.01
ATG38YLR211C YCR024C-BQ3E7Z8 88 aa2.51□□□□□ -2.01
ATG38YLR211C PIS1P06197 220 aaKnown RBP2.5□□□□□ -2.01
ATG38YLR211C IGD1P43598 195 aa2.5□□□□□ -2.01
ATG38YLR211C AIM32Q04689 311 aa2.5□□□□□ -2.01
ATG38YLR211C BI3Q9ZZW7 517 aa2.5□□□□□ -2.01
ATG38YLR211C POM152P39685 1337 aa2.49□□□□□ -2.01
ATG38YLR211C REC107P21651 314 aa2.49□□□□□ -2.01
ATG38YLR211C YEF1P32622 495 aa2.49□□□□□ -2.01
ATG38YLR211C ECT1P33412 323 aa2.49□□□□□ -2.01
ATG38YLR211C DTR1P38125 572 aa2.49□□□□□ -2.01
ATG38YLR211C YNL208WP40159 199 aaKnown RBP2.49□□□□□ -2.01
ATG38YLR211C VHS2P40463 436 aa2.49□□□□□ -2.01
ATG38YLR211C IGO1P53897 168 aa2.49□□□□□ -2.01
ATG38YLR211C PRP42Q03776 544 aaKnown RBP2.49□□□□□ -2.01
ATG38YLR211C YPR091CQ06833 770 aa2.49□□□□□ -2.01
ATG38YLR211C LOT6Q07923 191 aa2.49□□□□□ -2.01
ATG38YLR211C RRG1Q12167 365 aaPredicted RBP2.49□□□□□ -2.01
ATG38YLR211C RAX2Q12465 1220 aa2.49□□□□□ -2.01
ATG38YLR211C MTR10Q99189 972 aa2.49□□□□□ -2.01
ATG38YLR211C ALG1P16661 449 aa2.48□□□□□ -2.01
ATG38YLR211C DPH2P32461 534 aa2.48□□□□□ -2.01
ATG38YLR211C SKN1P33336 771 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms