RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W ECM10P39987 644 aa4.32□□□□□ -1.72
CBF5YLR175W YPS6P40583 537 aa4.32□□□□□ -1.72
CBF5YLR175W AGP3P43548 558 aa4.32□□□□□ -1.72
CBF5YLR175W YJL043WP47053 257 aa4.32□□□□□ -1.72
CBF5YLR175W RAD17P48581 401 aa4.32□□□□□ -1.72
CBF5YLR175W ATP22P50273 684 aaPredicted RBP4.32□□□□□ -1.72
CBF5YLR175W ESF2P53743 316 aaKnown RBP4.32□□□□□ -1.72
CBF5YLR175W ELA1P53861 379 aaPredicted RBP4.32□□□□□ -1.72
CBF5YLR175W IGO1P53897 168 aa4.32□□□□□ -1.72
CBF5YLR175W BNA5Q05979 453 aa4.32□□□□□ -1.72
CBF5YLR175W RRP40Q08285 240 aaKnown RBP4.32□□□□□ -1.72
CBF5YLR175W ULA1Q12059 462 aa4.32□□□□□ -1.72
CBF5YLR175W RTK1Q12100 620 aaPredicted RBP4.32□□□□□ -1.72
CBF5YLR175W TAF3Q12297 353 aa4.32□□□□□ -1.72
CBF5YLR175W YPR064WQ12492 139 aa4.32□□□□□ -1.72
CBF5YLR175W SEN1Q00416 2231 aaKnown RBP4.32□□□□□ -1.72
CBF5YLR175W SLH1P53327 1967 aaKnown RBP4.32□□□□□ -1.72
CBF5YLR175W ALG7P07286 448 aa4.31□□□□□ -1.72
CBF5YLR175W URA4P20051 364 aa4.31□□□□□ -1.72
CBF5YLR175W NFS1P25374 497 aa4.31□□□□□ -1.72
CBF5YLR175W DMC1P25453 334 aa4.31□□□□□ -1.72
CBF5YLR175W SPB1P25582 841 aaPredicted RBP4.31□□□□□ -1.72
CBF5YLR175W HOG1P32485 435 aa4.31□□□□□ -1.72
CBF5YLR175W NUP2P32499 720 aa4.31□□□□□ -1.72
CBF5YLR175W UGP1P32861 499 aaKnown RBP4.31□□□□□ -1.72
CBF5YLR175W OAR1P35731 278 aa4.31□□□□□ -1.72
CBF5YLR175W APT2P36973 181 aa4.31□□□□□ -1.72
CBF5YLR175W RCK1P38622 512 aa4.31□□□□□ -1.72
CBF5YLR175W STP2P38704 541 aa4.31□□□□□ -1.72
CBF5YLR175W YHL012WP38709 493 aa4.31□□□□□ -1.72
CBF5YLR175W LTP1P40347 161 aa4.31□□□□□ -1.72
CBF5YLR175W RIC1P40395 1056 aa4.31□□□□□ -1.72
CBF5YLR175W VHR1P40522 640 aa4.31□□□□□ -1.72
CBF5YLR175W ROG1P53118 685 aa4.31□□□□□ -1.72
CBF5YLR175W FHN1P53279 174 aa4.31□□□□□ -1.72
CBF5YLR175W PEX12Q04370 399 aa4.31□□□□□ -1.72
CBF5YLR175W GAD1Q04792 585 aa4.31□□□□□ -1.72
CBF5YLR175W STP3Q05937 343 aa4.31□□□□□ -1.72
CBF5YLR175W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
CBF5YLR175W THP1Q08231 455 aa4.31□□□□□ -1.72
CBF5YLR175W RKM5Q12367 367 aa4.31□□□□□ -1.72
CBF5YLR175W MDM12Q92328 271 aa4.31□□□□□ -1.72
CBF5YLR175W RAD7P06779 565 aa4.3□□□□□ -1.72
CBF5YLR175W RPL1AP0CX43 217 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W RPL1BP0CX44 217 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W IDH2P28241 369 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W CWP1P28319 239 aa4.3□□□□□ -1.72
CBF5YLR175W PRO1P32264 428 aa4.3□□□□□ -1.72
CBF5YLR175W NTH1P32356 751 aa4.3□□□□□ -1.72
CBF5YLR175W APE2P32454 952 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W SSO1P32867 290 aa4.3□□□□□ -1.72
CBF5YLR175W SUI1P32911 108 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W SWH1P35845 1188 aa4.3□□□□□ -1.72
CBF5YLR175W NNK1P36003 928 aa4.3□□□□□ -1.72
CBF5YLR175W OMA1P36163 345 aa4.3□□□□□ -1.72
CBF5YLR175W RIB1P38066 345 aa4.3□□□□□ -1.72
CBF5YLR175W YRO2P38079 344 aa4.3□□□□□ -1.72
CBF5YLR175W BNA4P38169 460 aa4.3□□□□□ -1.72
CBF5YLR175W EHT1P38295 451 aa4.3□□□□□ -1.72
CBF5YLR175W TSL1P38427 1098 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W RBG1P39729 369 aa4.3□□□□□ -1.72
CBF5YLR175W ALR2P43553 858 aa4.3□□□□□ -1.72
CBF5YLR175W HOC1P47124 396 aa4.3□□□□□ -1.72
CBF5YLR175W GPI8P49018 411 aa4.3□□□□□ -1.72
CBF5YLR175W TOM22P49334 152 aa4.3□□□□□ -1.72
CBF5YLR175W YGR012WP53206 393 aa4.3□□□□□ -1.72
CBF5YLR175W YGR016WP53209 190 aa4.3□□□□□ -1.72
CBF5YLR175W OAZ1Q02803 292 aa4.3□□□□□ -1.72
CBF5YLR175W RRP45Q05636 305 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W RSA3Q05942 220 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W DIC1Q06143 298 aa4.3□□□□□ -1.72
CBF5YLR175W BOP2Q06150 570 aa4.3□□□□□ -1.72
CBF5YLR175W NDL1Q06568 189 aa4.3□□□□□ -1.72
CBF5YLR175W GPI11Q06636 219 aa4.3□□□□□ -1.72
CBF5YLR175W TEN1Q07921 160 aa4.3□□□□□ -1.72
CBF5YLR175W YLR030WQ07967 263 aa4.3□□□□□ -1.72
CBF5YLR175W RRT8Q08219 342 aa4.3□□□□□ -1.72
CBF5YLR175W SKM1Q12469 655 aa4.3□□□□□ -1.72
CBF5YLR175W PFK27Q12471 397 aaPredicted RBP4.3□□□□□ -1.72
CBF5YLR175W MHF2Q3E829 80 aa4.3□□□□□ -1.72
CBF5YLR175W PNO1Q99216 274 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W HFA1P32874 2273 aa4.3□□□□□ -1.72
CBF5YLR175W PUT2P07275 575 aa4.3□□□□□ -1.72
CBF5YLR175W SNF5P18480 905 aa4.3□□□□□ -1.72
CBF5YLR175W RPS1BP23248 255 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W MGR1P25573 417 aa4.3□□□□□ -1.72
CBF5YLR175W BUD14P27637 709 aa4.3□□□□□ -1.72
CBF5YLR175W PEX3P28795 441 aa4.3□□□□□ -1.72
CBF5YLR175W THI4P32318 326 aa4.3□□□□□ -1.72
CBF5YLR175W YMC1P32331 307 aa4.3□□□□□ -1.72
CBF5YLR175W MNL1P38888 796 aa4.3□□□□□ -1.72
CBF5YLR175W PRP39P39682 629 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W SNL1P40548 159 aa4.3□□□□□ -1.72
CBF5YLR175W PAC11P40960 533 aa4.3□□□□□ -1.72
CBF5YLR175W PMT4P46971 762 aa4.3□□□□□ -1.72
CBF5YLR175W PAC10P48363 199 aa4.3□□□□□ -1.72
CBF5YLR175W NCE103P53615 221 aa4.3□□□□□ -1.72
CBF5YLR175W SED5Q01590 340 aa4.3□□□□□ -1.72
CBF5YLR175W SPR6Q01684 191 aa4.3□□□□□ -1.72
CBF5YLR175W YDR239CQ03780 787 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms