RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W GIP2P40036 548 aa9.36□□□□□ -0.91
SHH4YLR164W SPG5P42933 373 aa9.36□□□□□ -0.91
SHH4YLR164W HOC1P47124 396 aa9.36□□□□□ -0.91
SHH4YLR164W TOM22P49334 152 aa9.36□□□□□ -0.91
SHH4YLR164W DBP9Q06218 594 aaKnown RBP9.36□□□□□ -0.91
SHH4YLR164W GAL4P04386 881 aa9.35□□□□□ -0.91
SHH4YLR164W FBA1P14540 359 aaKnown RBP9.35□□□□□ -0.91
SHH4YLR164W CLB4P24871 460 aa9.35□□□□□ -0.91
SHH4YLR164W RER1P25560 188 aa9.35□□□□□ -0.91
SHH4YLR164W SSH4P32343 579 aa9.35□□□□□ -0.91
SHH4YLR164W RPN2P32565 945 aaKnown RBP9.35□□□□□ -0.91
SHH4YLR164W YIL086CP40503 102 aa9.35□□□□□ -0.91
SHH4YLR164W SYF2P53277 215 aaPredicted RBP9.35□□□□□ -0.91
SHH4YLR164W ERG13P54839 491 aaKnown RBP9.35□□□□□ -0.91
SHH4YLR164W NAM8Q00539 523 aaKnown RBP9.35□□□□□ -0.91
SHH4YLR164W RRN5Q02983 363 aa9.35□□□□□ -0.91
SHH4YLR164W RAD30Q04049 632 aa9.35□□□□□ -0.91
SHH4YLR164W RSF1Q05043 376 aa9.35□□□□□ -0.91
SHH4YLR164W DBP10Q12389 995 aaKnown RBP9.35□□□□□ -0.91
SHH4YLR164W TSC13Q99190 310 aa9.35□□□□□ -0.91
SHH4YLR164W YCK1P23291 538 aa9.34□□□□□ -0.91
SHH4YLR164W YBR285WP38354 144 aa9.34□□□□□ -0.91
SHH4YLR164W PZF1P39933 429 aa9.34□□□□□ -0.91
SHH4YLR164W YJL068CP40363 299 aa9.34□□□□□ -0.91
SHH4YLR164W MRPS18P42847 217 aa9.34□□□□□ -0.91
SHH4YLR164W MTQ1P53944 314 aa9.34□□□□□ -0.91
SHH4YLR164W RSC9Q03124 581 aa9.34□□□□□ -0.91
SHH4YLR164W CTL1Q03220 320 aaKnown RBP9.34□□□□□ -0.91
SHH4YLR164W NDL1Q06568 189 aa9.34□□□□□ -0.91
SHH4YLR164W VIK1Q12045 647 aa9.34□□□□□ -0.91
SHH4YLR164W SIR3P06701 978 aa9.33□□□□□ -0.92
SHH4YLR164W CDC4P07834 779 aa9.33□□□□□ -0.92
SHH4YLR164W RPB5P20434 215 aa9.33□□□□□ -0.92
SHH4YLR164W URE2P23202 354 aaKnown RBP9.33□□□□□ -0.92
SHH4YLR164W RHB1P25378 209 aa9.33□□□□□ -0.92
SHH4YLR164W IDH1P28834 360 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
SHH4YLR164W MRPL6P32904 214 aa9.33□□□□□ -0.92
SHH4YLR164W HCS1P34243 683 aa9.33□□□□□ -0.92
SHH4YLR164W OCA5P38738 679 aa9.33□□□□□ -0.92
SHH4YLR164W PRP39P39682 629 aaKnown RBP9.33□□□□□ -0.92
SHH4YLR164W COG3P40094 801 aa9.33□□□□□ -0.92
SHH4YLR164W PDS1P40316 373 aaPredicted RBP9.33□□□□□ -0.92
SHH4YLR164W UTP25P40498 721 aaKnown RBP9.33□□□□□ -0.92
SHH4YLR164W YGR201CP42936 225 aa9.33□□□□□ -0.92
SHH4YLR164W VMA10P48836 114 aaKnown RBP9.33□□□□□ -0.92
SHH4YLR164W TRM9P49957 279 aa9.33□□□□□ -0.92
SHH4YLR164W DAM1P53267 343 aa9.33□□□□□ -0.92
SHH4YLR164W YGR266WP53326 701 aa9.33□□□□□ -0.92
SHH4YLR164W YMR226CQ05016 267 aaKnown RBP9.33□□□□□ -0.92
SHH4YLR164W ARO10Q06408 635 aa9.33□□□□□ -0.92
SHH4YLR164W GUP2Q08929 609 aa9.33□□□□□ -0.92
SHH4YLR164W RSA1Q08932 381 aa9.33□□□□□ -0.92
SHH4YLR164W YTM1Q12024 460 aaPredicted RBP9.33□□□□□ -0.92
SHH4YLR164W YDR061WQ12298 539 aa9.33□□□□□ -0.92
SHH4YLR164W YKL033W-AQ86ZR7 236 aa9.33□□□□□ -0.92
SHH4YLR164W GPH1P06738 902 aaKnown RBP9.32□□□□□ -0.92
SHH4YLR164W RPC40P07703 335 aaKnown RBP9.32□□□□□ -0.92
SHH4YLR164W SEC2P17065 759 aa9.32□□□□□ -0.92
SHH4YLR164W MCK1P21965 375 aaKnown RBP9.32□□□□□ -0.92
SHH4YLR164W BCK2P33306 851 aa9.32□□□□□ -0.92
SHH4YLR164W MSN2P33748 704 aa9.32□□□□□ -0.92
SHH4YLR164W YAR028WP39548 234 aa9.32□□□□□ -0.92
SHH4YLR164W THO1P40040 218 aaKnown RBP9.32□□□□□ -0.92
SHH4YLR164W PRE6P40303 254 aaKnown RBP9.32□□□□□ -0.92
SHH4YLR164W MPH1P40562 993 aa9.32□□□□□ -0.92
SHH4YLR164W MON1P53129 644 aa9.32□□□□□ -0.92
SHH4YLR164W TPC1P53257 314 aa9.32□□□□□ -0.92
SHH4YLR164W TPS1Q00764 495 aaKnown RBP9.32□□□□□ -0.92
SHH4YLR164W RIM13Q03792 727 aa9.32□□□□□ -0.92
SHH4YLR164W YOL073CQ08232 322 aa9.32□□□□□ -0.92
SHH4YLR164W AAC3P18238 307 aa9.31□□□□□ -0.92
SHH4YLR164W PET9P18239 318 aaKnown RBP9.31□□□□□ -0.92
SHH4YLR164W APN1P22936 367 aa9.31□□□□□ -0.92
SHH4YLR164W ECM8P38246 354 aa9.31□□□□□ -0.92
SHH4YLR164W BIG1P38813 335 aa9.31□□□□□ -0.92
SHH4YLR164W JHD2P47156 728 aaPredicted RBP9.31□□□□□ -0.92
SHH4YLR164W GPI8P49018 411 aa9.31□□□□□ -0.92
SHH4YLR164W TOS2P50078 622 aa9.31□□□□□ -0.92
SHH4YLR164W PRM8P53174 237 aa9.31□□□□□ -0.92
SHH4YLR164W RNH202Q05635 350 aa9.31□□□□□ -0.92
SHH4YLR164W FDH1Q08911 376 aa9.31□□□□□ -0.92
SHH4YLR164W MRX4Q12467 430 aa9.31□□□□□ -0.92
SHH4YLR164W RPS21BQ3E754 87 aaKnown RBP9.31□□□□□ -0.92
SHH4YLR164W MOD5P07884 428 aa9.3□□□□□ -0.92
SHH4YLR164W STP22P25604 385 aa9.3□□□□□ -0.92
SHH4YLR164W TIF3P34167 436 aaKnown RBP9.3□□□□□ -0.92
SHH4YLR164W LOT5P34234 306 aa9.3□□□□□ -0.92
SHH4YLR164W YHR210CP38893 341 aa9.3□□□□□ -0.92
SHH4YLR164W TAT2P38967 592 aa9.3□□□□□ -0.92
SHH4YLR164W TPA1P40032 644 aaKnown RBP9.3□□□□□ -0.92
SHH4YLR164W FAR7P43592 221 aa9.3□□□□□ -0.92
SHH4YLR164W TIM54P47045 478 aa9.3□□□□□ -0.92
SHH4YLR164W YAT1P80235 687 aa9.3□□□□□ -0.92
SHH4YLR164W KRE28Q04431 385 aa9.3□□□□□ -0.92
SHH4YLR164W NAT4Q04751 285 aa9.3□□□□□ -0.92
SHH4YLR164W YPR174CQ06616 221 aaPredicted RBP9.3□□□□□ -0.92
SHH4YLR164W NFI1Q12216 726 aa9.3□□□□□ -0.92
SHH4YLR164W NKP1Q12493 238 aa9.3□□□□□ -0.92
SHH4YLR164W YPL119C-AQ3E751 87 aa9.3□□□□□ -0.92
SHH4YLR164W ACC1Q00955 2233 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms