RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C CTL1Q03220 320 aaKnown RBP3.01□□□□□ -1.93
SDO1YLR022C PFA5Q03289 374 aa3.01□□□□□ -1.93
SDO1YLR022C ARX1Q03862 593 aaKnown RBP3.01□□□□□ -1.93
SDO1YLR022C YDL211CQ12121 372 aa3.01□□□□□ -1.93
SDO1YLR022C YMR230W-AQ3E7B5 62 aa3.01□□□□□ -1.93
SDO1YLR022C HSH49Q99181 213 aaPredicted RBP3.01□□□□□ -1.93
SDO1YLR022C FUM1P08417 488 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C RAP1P11938 827 aa3□□□□□ -1.93
SDO1YLR022C CLC1P17891 233 aa3□□□□□ -1.93
SDO1YLR022C RBK1P25332 333 aa3□□□□□ -1.93
SDO1YLR022C BUD14P27637 709 aa3□□□□□ -1.93
SDO1YLR022C SAC1P32368 623 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C VMA8P32610 256 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C SOF1P33750 489 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C YKL100CP34248 587 aa3□□□□□ -1.93
SDO1YLR022C CSG2P35206 410 aa3□□□□□ -1.93
SDO1YLR022C TEF4P36008 412 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C MUD2P36084 527 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C UTP9P38882 575 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C ECM10P39987 644 aa3□□□□□ -1.93
SDO1YLR022C RIC1P40395 1056 aa3□□□□□ -1.93
SDO1YLR022C ARF3P40994 183 aaRIP-Chip data3□□□□□ -1.93not detected
SDO1YLR022C IAH1P41734 238 aa3□□□□□ -1.93
SDO1YLR022C TRF5P48561 642 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C YML6P51998 286 aa3□□□□□ -1.93
SDO1YLR022C SGF73P53165 657 aa3□□□□□ -1.93
SDO1YLR022C ELP3Q02908 557 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C PSK2Q08217 1101 aa3□□□□□ -1.93
SDO1YLR022C LEU9Q12166 604 aaKnown RBP3□□□□□ -1.93
SDO1YLR022C LAG2Q92325 660 aa3□□□□□ -1.93
SDO1YLR022C AFI1Q99222 893 aa3□□□□□ -1.93
SDO1YLR022C MDM35O60200 86 aa2.99□□□□□ -1.93
SDO1YLR022C COX5AP00424 153 aa2.99□□□□□ -1.93
SDO1YLR022C CPA1P07258 411 aaKnown RBP2.99□□□□□ -1.93
SDO1YLR022C TY2A-LR1P0C2J4 438 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-FP0CX61 438 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-GR2P0CX62 438 aa2.99□□□□□ -1.93
SDO1YLR022C AAC3P18238 307 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-CP25383 438 aa2.99□□□□□ -1.93
SDO1YLR022C DBF4P32325 704 aa2.99□□□□□ -1.93
SDO1YLR022C RPN2P32565 945 aaKnown RBP2.99□□□□□ -1.93
SDO1YLR022C SRB5P32585 307 aa2.99□□□□□ -1.93
SDO1YLR022C MAL32P38158 584 aa2.99□□□□□ -1.93
SDO1YLR022C TRM7P38238 310 aaKnown RBP2.99□□□□□ -1.93
SDO1YLR022C RPH1P39956 796 aa2.99□□□□□ -1.93
SDO1YLR022C YEL068CP39977 110 aa2.99□□□□□ -1.93
SDO1YLR022C YER010CP40011 234 aa2.99□□□□□ -1.93
SDO1YLR022C HXT9P40885 567 aa2.99□□□□□ -1.93
SDO1YLR022C IRC6P43615 237 aa2.99□□□□□ -1.93
SDO1YLR022C ATG27P46989 271 aa2.99□□□□□ -1.93
SDO1YLR022C COS5P47187 383 aa2.99□□□□□ -1.93
SDO1YLR022C UPF3P48412 387 aaKnown RBP2.99□□□□□ -1.93
SDO1YLR022C OCA1P50946 238 aaPredicted RBP2.99□□□□□ -1.93
SDO1YLR022C HOP2P53187 214 aa2.99□□□□□ -1.93
SDO1YLR022C ARC35P53731 342 aaKnown RBP2.99□□□□□ -1.93
SDO1YLR022C YNL234WP53857 426 aa2.99□□□□□ -1.93
SDO1YLR022C PRO2P54885 456 aaKnown RBP2.99□□□□□ -1.93
SDO1YLR022C RSM28Q03430 361 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-DR2Q03483 438 aa2.99□□□□□ -1.93
SDO1YLR022C GRX8Q05926 109 aa2.99□□□□□ -1.93
SDO1YLR022C CMS1Q07897 291 aaKnown RBP2.99□□□□□ -1.93
SDO1YLR022C RSA1Q08932 381 aa2.99□□□□□ -1.93
SDO1YLR022C RCN2Q12044 265 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-BQ12260 438 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-OR2Q12293 438 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-DR1Q12392 438 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-OR1Q12439 438 aa2.99□□□□□ -1.93
SDO1YLR022C TY2A-DR3Q99303 438 aa2.99□□□□□ -1.93
SDO1YLR022C PHO84P25297 587 aaKnown RBP2.98□□□□□ -1.93
SDO1YLR022C GID7P25569 745 aa2.98□□□□□ -1.93
SDO1YLR022C SPS19P32573 292 aaKnown RBP2.98□□□□□ -1.93
SDO1YLR022C GYP6P32806 458 aa2.98□□□□□ -1.93
SDO1YLR022C CNS1P33313 385 aa2.98□□□□□ -1.93
SDO1YLR022C APE4P38821 490 aa2.98□□□□□ -1.93
SDO1YLR022C CAJ1P39101 391 aa2.98□□□□□ -1.93
SDO1YLR022C YER189WP40104 122 aa2.98□□□□□ -1.93
SDO1YLR022C RTS2P40962 232 aa2.98□□□□□ -1.93
SDO1YLR022C CUP9P41817 306 aa2.98□□□□□ -1.93
SDO1YLR022C DLD2P46681 530 aaKnown RBP2.98□□□□□ -1.93
SDO1YLR022C BNA1P47096 177 aa2.98□□□□□ -1.93
SDO1YLR022C JHD2P47156 728 aaPredicted RBP2.98□□□□□ -1.93
SDO1YLR022C COG1P53079 417 aa2.98□□□□□ -1.93
SDO1YLR022C VPS9P54787 451 aa2.98□□□□□ -1.93
SDO1YLR022C REG1Q00816 1014 aa2.98□□□□□ -1.93
SDO1YLR022C YSA1Q01976 231 aa2.98□□□□□ -1.93
SDO1YLR022C YDR209CQ03480 137 aa2.98□□□□□ -1.93
SDO1YLR022C EKI1Q03764 534 aa2.98□□□□□ -1.93
SDO1YLR022C TAF11Q04226 346 aa2.98□□□□□ -1.93
SDO1YLR022C RCO1Q04779 684 aa2.98□□□□□ -1.93
SDO1YLR022C SCW10Q04951 389 aa2.98□□□□□ -1.93
SDO1YLR022C YLR297WQ05899 129 aa2.98□□□□□ -1.93
SDO1YLR022C ENT4Q07872 247 aa2.98□□□□□ -1.93
SDO1YLR022C TMA16Q08687 178 aa2.98□□□□□ -1.93
SDO1YLR022C GCN4P03069 281 aa2.97□□□□□ -1.93
SDO1YLR022C BAR1P12630 587 aa2.97□□□□□ -1.93
SDO1YLR022C GUK1P15454 187 aaKnown RBP2.97□□□□□ -1.93
SDO1YLR022C AAT2P23542 418 aaKnown RBP2.97□□□□□ -1.93
SDO1YLR022C CDC15P27636 974 aa2.97□□□□□ -1.93
SDO1YLR022C SAC6P32599 642 aaKnown RBP2.97□□□□□ -1.93
SDO1YLR022C DTR1P38125 572 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms