RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C ADK2P26364 225 aa3.4□□□□□ -1.87
RPF2YKR081C URA7P28274 579 aaKnown RBP3.4□□□□□ -1.87
RPF2YKR081C SLM4P38247 162 aa3.4□□□□□ -1.87
RPF2YKR081C OXA1P39952 402 aa3.4□□□□□ -1.87
RPF2YKR081C MAM33P40513 266 aa3.4□□□□□ -1.87
RPF2YKR081C CAK1P43568 368 aaPredicted RBP3.4□□□□□ -1.87
RPF2YKR081C ALF1P53904 254 aa3.4□□□□□ -1.87
RPF2YKR081C VPS72Q03388 795 aa3.4□□□□□ -1.87
RPF2YKR081C RPN9Q04062 393 aaKnown RBP3.4□□□□□ -1.87
RPF2YKR081C LIP2Q06005 328 aa3.4□□□□□ -1.87
RPF2YKR081C SMC5Q08204 1093 aa3.4□□□□□ -1.87
RPF2YKR081C NCA2Q12374 616 aa3.4□□□□□ -1.87
RPF2YKR081C EXG1P23776 448 aaKnown RBP3.39□□□□□ -1.87
RPF2YKR081C GAT2P40209 560 aa3.39□□□□□ -1.87
RPF2YKR081C HAC1P41546 238 aa3.39□□□□□ -1.87
RPF2YKR081C TOS3P43637 560 aa3.39□□□□□ -1.87
RPF2YKR081C AIM24P47127 394 aa3.39□□□□□ -1.87
RPF2YKR081C YMR102CQ03177 834 aa3.39□□□□□ -1.87
RPF2YKR081C LOT6Q07923 191 aa3.39□□□□□ -1.87
RPF2YKR081C RUP1Q12242 671 aa3.39□□□□□ -1.87
RPF2YKR081C EAF3Q12432 401 aa3.39□□□□□ -1.87
RPF2YKR081C CAP2P13517 287 aa3.38□□□□□ -1.87
RPF2YKR081C DPH5P32469 300 aaPredicted RBP3.38□□□□□ -1.87
RPF2YKR081C BAT1P38891 393 aaKnown RBP3.38□□□□□ -1.87
RPF2YKR081C LCB3P47013 409 aa3.38□□□□□ -1.87
RPF2YKR081C BNS1P50084 137 aa3.38□□□□□ -1.87
RPF2YKR081C VHS1Q03785 461 aa3.38□□□□□ -1.87
RPF2YKR081C SPC19Q03954 165 aa3.38□□□□□ -1.87
RPF2YKR081C ERB1Q04660 807 aaKnown RBP3.38□□□□□ -1.87
RPF2YKR081C CYS4P32582 507 aaKnown RBP3.37□□□□□ -1.87
RPF2YKR081C ASC1P38011 319 aaKnown RBP3.37□□□□□ -1.87
RPF2YKR081C VHS2P40463 436 aa3.37□□□□□ -1.87
RPF2YKR081C ATG18P43601 500 aa3.37□□□□□ -1.87
RPF2YKR081C CLD1P53264 445 aa3.37□□□□□ -1.87
RPF2YKR081C CRH1P53301 507 aa3.37□□□□□ -1.87
RPF2YKR081C PRP42Q03776 544 aaKnown RBP3.37□□□□□ -1.87
RPF2YKR081C YDR131CQ03899 556 aa3.37□□□□□ -1.87
RPF2YKR081C YET2Q04210 160 aa3.37□□□□□ -1.87
RPF2YKR081C VPS54Q12071 889 aa3.37□□□□□ -1.87
RPF2YKR081C PSK1P31374 1356 aa3.37□□□□□ -1.87
RPF2YKR081C PDX1P16451 410 aa3.36□□□□□ -1.87
RPF2YKR081C CLB1P24868 471 aa3.36□□□□□ -1.87
RPF2YKR081C ERV1P27882 189 aa3.36□□□□□ -1.87
RPF2YKR081C IES6P32617 166 aa3.36□□□□□ -1.87
RPF2YKR081C OLA1P38219 394 aaKnown RBP3.36□□□□□ -1.87
RPF2YKR081C OM14P38325 134 aa3.36□□□□□ -1.87
RPF2YKR081C YHK8P38776 514 aa3.36□□□□□ -1.87
RPF2YKR081C EGT2P42835 1041 aa3.36□□□□□ -1.87
RPF2YKR081C APJ1P53940 528 aa3.36□□□□□ -1.87
RPF2YKR081C TDA1Q03533 586 aa3.36□□□□□ -1.87
RPF2YKR081C PRM6Q04705 352 aa3.36□□□□□ -1.87
RPF2YKR081C YBL111CQ3E7Y5 667 aa3.36□□□□□ -1.87
RPF2YKR081C PIS1P06197 220 aaKnown RBP3.35□□□□□ -1.87
RPF2YKR081C DST1P07273 309 aa3.35□□□□□ -1.87
RPF2YKR081C ANR2P36090 516 aaPredicted RBP3.35□□□□□ -1.87
RPF2YKR081C HEL1P36113 551 aa3.35□□□□□ -1.87
RPF2YKR081C PTI1P39927 425 aaPredicted RBP3.35□□□□□ -1.87
RPF2YKR081C YER079WP40052 210 aaKnown RBP3.35□□□□□ -1.87
RPF2YKR081C YER186CP40101 306 aa3.35□□□□□ -1.87
RPF2YKR081C RNY1Q02933 434 aaKnown RBP3.35□□□□□ -1.87
RPF2YKR081C DNL4Q08387 944 aaPredicted RBP3.35□□□□□ -1.87
RPF2YKR081C COX4P04037 155 aa3.34□□□□□ -1.87
RPF2YKR081C ATP1P07251 545 aaKnown RBP3.34□□□□□ -1.87
RPF2YKR081C ARO3P14843 370 aaKnown RBP3.34□□□□□ -1.87
RPF2YKR081C RPC53P25441 422 aa3.34□□□□□ -1.87
RPF2YKR081C CDC50P25656 391 aa3.34□□□□□ -1.87
RPF2YKR081C YEF1P32622 495 aa3.34□□□□□ -1.87
RPF2YKR081C MRPS9P38120 278 aa3.34□□□□□ -1.87
RPF2YKR081C SEO1P39709 593 aa3.34□□□□□ -1.87
RPF2YKR081C RRP46P53256 223 aaPredicted RBP3.34□□□□□ -1.87
RPF2YKR081C MKC7P53379 596 aa3.34□□□□□ -1.87
RPF2YKR081C COS1P53822 381 aa3.34□□□□□ -1.87
RPF2YKR081C MRPS16Q02608 121 aa3.34□□□□□ -1.87
RPF2YKR081C AEP3Q12089 606 aa3.34□□□□□ -1.87
RPF2YKR081C CPR2P23285 205 aa3.33□□□□□ -1.88
RPF2YKR081C SER3P40054 469 aa3.33□□□□□ -1.88
RPF2YKR081C MMF1P40185 145 aaKnown RBP3.33□□□□□ -1.88
RPF2YKR081C CHS6P40955 746 aa3.33□□□□□ -1.88
RPF2YKR081C TCB2P48231 1178 aa3.33□□□□□ -1.88
RPF2YKR081C YPQ1Q12010 308 aa3.33□□□□□ -1.88
RPF2YKR081C NAG1Q8TGN9 163 aa3.33□□□□□ -1.88
RPF2YKR081C POM152P39685 1337 aa3.33□□□□□ -1.88
RPF2YKR081C CDC21P06785 304 aa3.32□□□□□ -1.88
RPF2YKR081C HSP104P31539 908 aaKnown RBP3.32□□□□□ -1.88
RPF2YKR081C SKN1P33336 771 aa3.32□□□□□ -1.88
RPF2YKR081C YKL097CP34245 136 aa3.32□□□□□ -1.88
RPF2YKR081C ZTA1P38230 334 aaKnown RBP3.32□□□□□ -1.88
RPF2YKR081C STN1P38960 494 aa3.32□□□□□ -1.88
RPF2YKR081C YNL208WP40159 199 aaKnown RBP3.32□□□□□ -1.88
RPF2YKR081C RMT2Q03305 412 aa3.32□□□□□ -1.88
RPF2YKR081C ECM11Q04110 302 aa3.32□□□□□ -1.88
RPF2YKR081C HTZ1Q12692 134 aaKnown RBP3.32□□□□□ -1.88
RPF2YKR081C PAB1P04147 577 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
RPF2YKR081C INM1P38710 295 aa3.31□□□□□ -1.88
RPF2YKR081C YGR117CP53270 476 aa3.31□□□□□ -1.88
RPF2YKR081C MFG1Q07684 458 aa3.31□□□□□ -1.88
RPF2YKR081C YCR024C-BQ3E7Z8 88 aa3.31□□□□□ -1.88
RPF2YKR081C CBP6P07253 162 aaPredicted RBP3.3□□□□□ -1.88
RPF2YKR081C ALG1P16661 449 aa3.3□□□□□ -1.88
RPF2YKR081C RIM1P32445 135 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms