RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W MRS3P10566 314 aa5.19□□□□□ -1.58
PRP40YKL012W ARF1P11076 181 aaKnown RBP5.19□□□□□ -1.58
PRP40YKL012W YKL097CP34245 136 aa5.19□□□□□ -1.58
PRP40YKL012W SSO2P39926 295 aa5.19□□□□□ -1.58
PRP40YKL012W RTT105P40063 208 aa5.19□□□□□ -1.58
PRP40YKL012W YMR310CQ04867 317 aaPredicted RBP5.19□□□□□ -1.58
PRP40YKL012W MSC3Q05812 728 aa5.19□□□□□ -1.58
PRP40YKL012W YPR078CQ06813 372 aa5.19□□□□□ -1.58
PRP40YKL012W YAP7Q08182 245 aa5.19□□□□□ -1.58
PRP40YKL012W DNA2P38859 1522 aa5.19□□□□□ -1.58
PRP40YKL012W MAS1P10507 462 aa5.19□□□□□ -1.58
PRP40YKL012W MTF1P14908 341 aaKnown RBP5.19□□□□□ -1.58
PRP40YKL012W YBR139WP38109 508 aa5.19□□□□□ -1.58
PRP40YKL012W ALG8P40351 577 aa5.19□□□□□ -1.58
PRP40YKL012W YIL169CP40442 995 aa5.19□□□□□ -1.58
PRP40YKL012W PIR3Q03180 325 aa5.19□□□□□ -1.58
PRP40YKL012W LDS2Q08218 356 aa5.19□□□□□ -1.58
PRP40YKL012W YCR043CP25361 127 aa5.18□□□□□ -1.58
PRP40YKL012W HMX1P32339 317 aa5.18□□□□□ -1.58
PRP40YKL012W DOA1P36037 715 aa5.18□□□□□ -1.58
PRP40YKL012W MRPL40P36534 297 aa5.18□□□□□ -1.58
PRP40YKL012W MET30P39014 640 aa5.18□□□□□ -1.58
PRP40YKL012W YND1P40009 630 aa5.18□□□□□ -1.58
PRP40YKL012W ATM1P40416 690 aa5.18□□□□□ -1.58
PRP40YKL012W TES1P41903 349 aaKnown RBP5.18□□□□□ -1.58
PRP40YKL012W SPG5P42933 373 aa5.18□□□□□ -1.58
PRP40YKL012W RTT101P47050 842 aa5.18□□□□□ -1.58
PRP40YKL012W RET3P53600 189 aa5.18□□□□□ -1.58
PRP40YKL012W SNA4Q07549 140 aa5.18□□□□□ -1.58
PRP40YKL012W TPT1Q12272 230 aaKnown RBP5.18□□□□□ -1.58
PRP40YKL012W TAD3Q9URQ3 322 aa5.18□□□□□ -1.58
PRP40YKL012W SAM1P10659 382 aaKnown RBP5.17□□□□□ -1.58
PRP40YKL012W RNA1P11745 407 aaKnown RBP5.17□□□□□ -1.58
PRP40YKL012W GCD2P12754 651 aaPredicted RBP5.17□□□□□ -1.58
PRP40YKL012W MSK1P32048 576 aa5.17□□□□□ -1.58
PRP40YKL012W SSE1P32589 693 aaKnown RBP5.17□□□□□ -1.58
PRP40YKL012W COX13P32799 129 aa5.17□□□□□ -1.58
PRP40YKL012W ATP3P38077 311 aaKnown RBP5.17□□□□□ -1.58
PRP40YKL012W MTC4P38335 694 aaKnown RBP5.17□□□□□ -1.58
PRP40YKL012W SNL1P40548 159 aa5.17□□□□□ -1.58
PRP40YKL012W TOS2P50078 622 aa5.17□□□□□ -1.58
PRP40YKL012W ASA1Q06822 443 aa5.17□□□□□ -1.58
PRP40YKL012W YPL199CQ08954 240 aa5.17□□□□□ -1.58
PRP40YKL012W CDC37P06101 506 aaKnown RBP5.16□□□□□ -1.58
PRP40YKL012W ATP1P07251 545 aaKnown RBP5.16□□□□□ -1.58
PRP40YKL012W ATR1P13090 542 aa5.16□□□□□ -1.58
PRP40YKL012W CDC23P16522 626 aa5.16□□□□□ -1.58
PRP40YKL012W SAM2P19358 384 aaKnown RBP5.16□□□□□ -1.58
PRP40YKL012W LOS1P33418 1100 aaPredicted RBP5.16□□□□□ -1.58
PRP40YKL012W BZZ1P38822 633 aa5.16□□□□□ -1.58
PRP40YKL012W YHR122WP38829 231 aa5.16□□□□□ -1.58
PRP40YKL012W SIM1P40472 476 aa5.16□□□□□ -1.58
PRP40YKL012W TOS3P43637 560 aa5.16□□□□□ -1.58
PRP40YKL012W RRP36Q12481 300 aaPredicted RBP5.16□□□□□ -1.58
PRP40YKL012W KOG1P38873 1557 aa5.16□□□□□ -1.58
PRP40YKL012W POL1P13382 1468 aa5.16□□□□□ -1.58
PRP40YKL012W VPS63O13549 108 aa5.16□□□□□ -1.58
PRP40YKL012W HEM2P05373 342 aa5.16□□□□□ -1.58
PRP40YKL012W RNR2P09938 399 aaKnown RBP5.16□□□□□ -1.58
PRP40YKL012W GAL3P13045 520 aa5.16□□□□□ -1.58
PRP40YKL012W HXT2P23585 541 aa5.16□□□□□ -1.58
PRP40YKL012W PET18P25362 215 aa5.16□□□□□ -1.58
PRP40YKL012W PPQ1P32945 549 aa5.16□□□□□ -1.58
PRP40YKL012W SKT5P34226 696 aa5.16□□□□□ -1.58
PRP40YKL012W EBP2P36049 427 aaKnown RBP5.16□□□□□ -1.58
PRP40YKL012W PMU1P36069 295 aa5.16□□□□□ -1.58
PRP40YKL012W YMR181CQ03231 154 aa5.16□□□□□ -1.58
PRP40YKL012W SRL1Q08673 210 aa5.16□□□□□ -1.58
PRP40YKL012W NCA2Q12374 616 aa5.16□□□□□ -1.58
PRP40YKL012W CEX1Q12453 761 aa5.16□□□□□ -1.58
PRP40YKL012W AIM45Q12480 344 aaKnown RBP5.16□□□□□ -1.58
PRP40YKL012W RAD61Q99359 647 aa5.16□□□□□ -1.58
PRP40YKL012W STU1P38198 1513 aa5.15□□□□□ -1.58
PRP40YKL012W PEP1P32319 1579 aa5.15□□□□□ -1.58
PRP40YKL012W DBR1P24309 405 aaKnown RBP5.15□□□□□ -1.58
PRP40YKL012W GRR1P24814 1151 aa5.15□□□□□ -1.58
PRP40YKL012W SEC1P30619 724 aaKnown RBP5.15□□□□□ -1.58
PRP40YKL012W TOA2P32774 122 aa5.15□□□□□ -1.58
PRP40YKL012W KKQ8P36004 724 aa5.15□□□□□ -1.58
PRP40YKL012W MNN9P39107 395 aaKnown RBP5.15□□□□□ -1.58
PRP40YKL012W CAF40P53829 373 aa5.15□□□□□ -1.58
PRP40YKL012W ERP1Q05359 219 aaKnown RBP5.15□□□□□ -1.58
PRP40YKL012W STE23Q06010 1027 aa5.15□□□□□ -1.58
PRP40YKL012W AYT1Q12226 474 aa5.15□□□□□ -1.58
PRP40YKL012W BUD4P47136 1447 aa5.15□□□□□ -1.59
PRP40YKL012W RPL20AP0CX23 172 aaKnown RBP5.14□□□□□ -1.59
PRP40YKL012W RPL20BP0CX24 172 aaPredicted RBP5.14□□□□□ -1.59
PRP40YKL012W RIB7P33312 244 aa5.14□□□□□ -1.59
PRP40YKL012W FAA2P39518 744 aa5.14□□□□□ -1.59
PRP40YKL012W LCP5P40079 357 aaPredicted RBP5.14□□□□□ -1.59
PRP40YKL012W YJL070CP40361 888 aa5.14□□□□□ -1.59
PRP40YKL012W RPR2P40571 144 aa5.14□□□□□ -1.59
PRP40YKL012W YFR018CP43599 363 aa5.14□□□□□ -1.59
PRP40YKL012W AZR1P50080 613 aa5.14□□□□□ -1.59
PRP40YKL012W CUR1Q06469 252 aa5.14□□□□□ -1.59
PRP40YKL012W PFK27Q12471 397 aaPredicted RBP5.14□□□□□ -1.59
PRP40YKL012W FSH3Q99369 266 aa5.14□□□□□ -1.59
PRP40YKL012W YPK9Q12697 1472 aa5.14□□□□□ -1.59
PRP40YKL012W RPL15AP05748 204 aaKnown RBP5.14□□□□□ -1.59
PRP40YKL012W TPK3P05986 398 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms