RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	TDP1	P38319	544 aa		11.92	□□□□□ -0.5
HOM6	YJR139C	MAM33	P40513	266 aa		11.92	□□□□□ -0.5
HOM6	YJR139C	ARF3	P40994	183 aa	RIP-Chip data	11.92	□□□□□ -0.5	not detected
HOM6	YJR139C	ARI1	P53111	347 aa	Known RBP	11.92	□□□□□ -0.5
HOM6	YJR139C	SMA2	Q04658	369 aa		11.92	□□□□□ -0.5
HOM6	YJR139C	ASA1	Q06822	443 aa		11.92	□□□□□ -0.5
HOM6	YJR139C	MFG1	Q07684	458 aa		11.92	□□□□□ -0.5
HOM6	YJR139C	YOR376W	Q08900	122 aa		11.92	□□□□□ -0.5
HOM6	YJR139C	REX3	Q12090	404 aa		11.92	□□□□□ -0.5
HOM6	YJR139C	ATP2	P00830	511 aa	Known RBP	11.91	□□□□□ -0.5
HOM6	YJR139C	HTA1	P04911	132 aa	Known RBP	11.91	□□□□□ -0.5
HOM6	YJR139C	RPP1B	P10622	106 aa	Known RBP	11.91	□□□□□ -0.5
HOM6	YJR139C	PMR1	P13586	950 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	UGA1	P17649	471 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	PEX6	P33760	1030 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	MRP8	P35719	219 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	TUL1	P36096	758 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	ZTA1	P38230	334 aa	Known RBP	11.91	□□□□□ -0.5
HOM6	YJR139C	PZF1	P39933	429 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	SER3	P40054	469 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	APS3	P47064	194 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	YGL260W	P53056	76 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	YGR079W	P53249	370 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	ACL4	Q03771	387 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	ARR1	Q06596	294 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	PSR1	Q07800	427 aa		11.91	□□□□□ -0.5
HOM6	YJR139C	PRP46	Q12417	451 aa	Predicted RBP	11.91	□□□□□ -0.5
HOM6	YJR139C	PUT2	P07275	575 aa		11.9	□□□□□ -0.5
HOM6	YJR139C	RPL20A	P0CX23	172 aa	Known RBP	11.9	□□□□□ -0.5
HOM6	YJR139C	RPL20B	P0CX24	172 aa	Predicted RBP	11.9	□□□□□ -0.5
HOM6	YJR139C	PDB1	P32473	366 aa	Known RBP	11.9	□□□□□ -0.5
HOM6	YJR139C	YCK3	P39962	524 aa		11.9	□□□□□ -0.5
HOM6	YJR139C	PRP8	P33334	2413 aa	Known RBP	11.89	□□□□□ -0.51
HOM6	YJR139C	LHP1	P33399	275 aa	Known RBP	11.89	□□□□□ -0.51
HOM6	YJR139C	KAE1	P36132	386 aa		11.89	□□□□□ -0.51
HOM6	YJR139C	SEA4	P38164	1038 aa		11.89	□□□□□ -0.51
HOM6	YJR139C	PTI1	P39927	425 aa	Predicted RBP	11.89	□□□□□ -0.51
HOM6	YJR139C	TPA1	P40032	644 aa	Known RBP	11.89	□□□□□ -0.51
HOM6	YJR139C	ALG5	P40350	334 aa		11.89	□□□□□ -0.51
HOM6	YJR139C	JEM1	P40358	645 aa		11.89	□□□□□ -0.51
HOM6	YJR139C	GET1	P53192	235 aa		11.89	□□□□□ -0.51
HOM6	YJR139C	GPI1	P53306	609 aa		11.89	□□□□□ -0.51
HOM6	YJR139C	YMR102C	Q03177	834 aa		11.89	□□□□□ -0.51
HOM6	YJR139C	DCI1	Q08558	271 aa		11.89	□□□□□ -0.51
HOM6	YJR139C	HAA1	Q12753	694 aa	Known RBP	11.89	□□□□□ -0.51
HOM6	YJR139C	MSS18	P08593	268 aa		11.88	□□□□□ -0.51
HOM6	YJR139C	CLB3	P24870	427 aa		11.88	□□□□□ -0.51
HOM6	YJR139C	YCR102C	P25608	368 aa		11.88	□□□□□ -0.51
HOM6	YJR139C	YHR218W	P38899	603 aa		11.88	□□□□□ -0.51
HOM6	YJR139C	YEL020C	P39994	560 aa		11.88	□□□□□ -0.51
HOM6	YJR139C	RNH70	P53331	553 aa		11.88	□□□□□ -0.51
HOM6	YJR139C	SVL3	Q03088	825 aa	Known RBP	11.88	□□□□□ -0.51
HOM6	YJR139C	YPL225W	Q08971	146 aa	Known RBP	11.88	□□□□□ -0.51
HOM6	YJR139C	GLT1	Q12680	2145 aa	Known RBP	11.88	□□□□□ -0.51
HOM6	YJR139C	ADF1	Q2V2Q1	113 aa		11.88	□□□□□ -0.51
HOM6	YJR139C	SAC7	P17121	654 aa		11.87	□□□□□ -0.51
HOM6	YJR139C	DSS1	P39112	969 aa		11.87	□□□□□ -0.51
HOM6	YJR139C	MDV1	P47025	714 aa		11.87	□□□□□ -0.51
HOM6	YJR139C	AAD10	P47182	288 aa		11.87	□□□□□ -0.51
HOM6	YJR139C	RAD30	Q04049	632 aa		11.87	□□□□□ -0.51
HOM6	YJR139C	ATG38	Q05789	226 aa	Known RBP	11.87	□□□□□ -0.51
HOM6	YJR139C	CYK3	Q07533	885 aa		11.87	□□□□□ -0.51
HOM6	YJR139C	TMS1	Q12116	473 aa		11.87	□□□□□ -0.51
HOM6	YJR139C	PSF1	Q12488	208 aa		11.87	□□□□□ -0.51
HOM6	YJR139C	PAR32	Q12515	295 aa	Known RBP	11.87	□□□□□ -0.51
HOM6	YJR139C	MF(ALPHA)1	P01149	165 aa		11.86	□□□□□ -0.51
HOM6	YJR139C	GAL3	P13045	520 aa		11.86	□□□□□ -0.51
HOM6	YJR139C	RPS1B	P23248	255 aa	Known RBP	11.86	□□□□□ -0.51
HOM6	YJR139C	FAA2	P39518	744 aa		11.86	□□□□□ -0.51
HOM6	YJR139C	CIN1	P40987	1014 aa		11.86	□□□□□ -0.51
HOM6	YJR139C	VPS73	P53142	486 aa	Known RBP	11.86	□□□□□ -0.51
HOM6	YJR139C	MPA43	P53583	542 aa	Predicted RBP	11.86	□□□□□ -0.51
HOM6	YJR139C	UGO1	Q03327	502 aa		11.86	□□□□□ -0.51
HOM6	YJR139C	NAT4	Q04751	285 aa		11.86	□□□□□ -0.51
HOM6	YJR139C	SPC2	Q04969	178 aa		11.86	□□□□□ -0.51
HOM6	YJR139C	AI1	P03875	834 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	CDC9	P04819	755 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	CTR86	P25355	563 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	PEX3	P28795	441 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	ALG3	P38179	458 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	OM14	P38325	134 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	ECM10	P39987	644 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	PHB1	P40961	287 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	TOM22	P49334	152 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	SEH1	P53011	349 aa	Known RBP	11.85	□□□□□ -0.51
HOM6	YJR139C	YNL181W	P53878	407 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	ATP25	Q03153	612 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	YPS7	Q06325	596 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	ULA1	Q12059	462 aa		11.85	□□□□□ -0.51
HOM6	YJR139C	CYT1	P07143	309 aa		11.84	□□□□□ -0.51
HOM6	YJR139C	YIM1	P28625	365 aa		11.84	□□□□□ -0.51
HOM6	YJR139C	TEF4	P36008	412 aa	Known RBP	11.84	□□□□□ -0.51
HOM6	YJR139C	TSL1	P38427	1098 aa	Known RBP	11.84	□□□□□ -0.51
HOM6	YJR139C	GID8	P40208	455 aa		11.84	□□□□□ -0.51
HOM6	YJR139C	SEC24	P40482	926 aa	Known RBP	11.84	□□□□□ -0.51
HOM6	YJR139C	BIT61	P47041	543 aa		11.84	□□□□□ -0.51
HOM6	YJR139C	NOP9	P47077	666 aa	Known RBP	11.84	□□□□□ -0.51
HOM6	YJR139C	IGO1	P53897	168 aa		11.84	□□□□□ -0.51
HOM6	YJR139C	YLR460C	P54007	376 aa		11.84	□□□□□ -0.51
HOM6	YJR139C	ATG21	Q02887	496 aa		11.84	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms