RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W OSW5P40219 148 aa6.08□□□□□ -1.44
GEF1YJR040W HXT16P47185 567 aa6.08□□□□□ -1.44
GEF1YJR040W PPT1P53043 513 aa6.08□□□□□ -1.44
GEF1YJR040W YOR352WQ08816 343 aa6.08□□□□□ -1.44
GEF1YJR040W ENV7Q12003 364 aa6.08□□□□□ -1.44
GEF1YJR040W YLR126CQ12288 251 aa6.08□□□□□ -1.44
GEF1YJR040W ICT1Q12385 394 aa6.08□□□□□ -1.44
GEF1YJR040W SNF8Q12483 233 aa6.08□□□□□ -1.44
GEF1YJR040W HXK2P04807 486 aaKnown RBP6.08□□□□□ -1.44
GEF1YJR040W RHB1P25378 209 aa6.08□□□□□ -1.44
GEF1YJR040W SFP1P32432 683 aa6.08□□□□□ -1.44
GEF1YJR040W MF(ALPHA)2P32435 120 aa6.08□□□□□ -1.44
GEF1YJR040W HIS7P33734 552 aaKnown RBP6.08□□□□□ -1.44
GEF1YJR040W AHP1P38013 176 aaKnown RBP6.08□□□□□ -1.44
GEF1YJR040W CDS1P38221 457 aa6.08□□□□□ -1.44
GEF1YJR040W HXT5P38695 592 aa6.08□□□□□ -1.44
GEF1YJR040W ACO2P39533 789 aa6.08□□□□□ -1.44
GEF1YJR040W YER034WP40022 185 aaKnown RBP6.08□□□□□ -1.44
GEF1YJR040W COG3P40094 801 aa6.08□□□□□ -1.44
GEF1YJR040W MEP1P40260 492 aa6.08□□□□□ -1.44
GEF1YJR040W MEP2P41948 499 aa6.08□□□□□ -1.44
GEF1YJR040W YJR124CP47159 448 aa6.08□□□□□ -1.44
GEF1YJR040W UBC12P52491 188 aa6.08□□□□□ -1.44
GEF1YJR040W GTF1P53260 183 aaPredicted RBP6.08□□□□□ -1.44
GEF1YJR040W SLI1P53304 468 aa6.08□□□□□ -1.44
GEF1YJR040W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
GEF1YJR040W SNZ1Q03148 297 aa6.08□□□□□ -1.44
GEF1YJR040W CCE1Q03702 353 aa6.08□□□□□ -1.44
GEF1YJR040W TRM82Q03774 444 aa6.08□□□□□ -1.44
GEF1YJR040W SNX41Q04053 625 aa6.08□□□□□ -1.44
GEF1YJR040W CBP6P07253 162 aaPredicted RBP6.07□□□□□ -1.44
GEF1YJR040W RPL3P14126 387 aaKnown RBP6.07□□□□□ -1.44
GEF1YJR040W TRM1P15565 570 aaKnown RBP6.07□□□□□ -1.44
GEF1YJR040W BFR1P38934 470 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
GEF1YJR040W PCL6P40038 420 aa6.07□□□□□ -1.44
GEF1YJR040W IME4P41833 600 aa6.07□□□□□ -1.44
GEF1YJR040W TES1P41903 349 aaKnown RBP6.07□□□□□ -1.44
GEF1YJR040W YJL049WP47048 450 aa6.07□□□□□ -1.44
GEF1YJR040W SPT20P50875 604 aa6.07□□□□□ -1.44
GEF1YJR040W ROM1P53046 1155 aa6.07□□□□□ -1.44
GEF1YJR040W JAC1P53193 184 aa6.07□□□□□ -1.44
GEF1YJR040W CAF120P53836 1060 aa6.07□□□□□ -1.44
GEF1YJR040W YNL143CP53908 130 aa6.07□□□□□ -1.44
GEF1YJR040W ACS1Q01574 713 aa6.07□□□□□ -1.44
GEF1YJR040W SMA1Q02651 245 aa6.07□□□□□ -1.44
GEF1YJR040W YPL071CQ02864 156 aa6.07□□□□□ -1.44
GEF1YJR040W EFR3Q03653 782 aaKnown RBP6.07□□□□□ -1.44
GEF1YJR040W VHS1Q03785 461 aa6.07□□□□□ -1.44
GEF1YJR040W YDR132CQ03900 495 aa6.07□□□□□ -1.44
GEF1YJR040W YDR514CQ04408 483 aa6.07□□□□□ -1.44
GEF1YJR040W YDL121CQ07541 149 aa6.07□□□□□ -1.44
GEF1YJR040W YGL194C-AQ2V2P6 80 aa6.07□□□□□ -1.44
GEF1YJR040W YLR149CQ99296 730 aa6.07□□□□□ -1.44
GEF1YJR040W YBR085C-AO43137 85 aa6.07□□□□□ -1.44
GEF1YJR040W HTA2P04912 132 aa6.07□□□□□ -1.44
GEF1YJR040W PRI2P20457 528 aa6.07□□□□□ -1.44
GEF1YJR040W CHL1P22516 861 aaPredicted RBP6.07□□□□□ -1.44
GEF1YJR040W GRR1P24814 1151 aa6.07□□□□□ -1.44
GEF1YJR040W RBK1P25332 333 aa6.07□□□□□ -1.44
GEF1YJR040W VPS17P32913 551 aa6.07□□□□□ -1.44
GEF1YJR040W OSH7P38755 437 aa6.07□□□□□ -1.44
GEF1YJR040W ERV46P39727 415 aa6.07□□□□□ -1.44
GEF1YJR040W GTT1P40582 234 aa6.07□□□□□ -1.44
GEF1YJR040W TIS11P47977 285 aa6.07□□□□□ -1.44
GEF1YJR040W RAD17P48581 401 aa6.07□□□□□ -1.44
GEF1YJR040W SCY1P53009 804 aa6.07□□□□□ -1.44
GEF1YJR040W MNT2P53059 558 aa6.07□□□□□ -1.44
GEF1YJR040W ELA1P53861 379 aaPredicted RBP6.07□□□□□ -1.44
GEF1YJR040W YHM2Q04013 314 aa6.07□□□□□ -1.44
GEF1YJR040W SIZ1Q04195 904 aa6.07□□□□□ -1.44
GEF1YJR040W TRM8Q12009 286 aa6.07□□□□□ -1.44
GEF1YJR040W PER33Q12144 273 aa6.07□□□□□ -1.44
GEF1YJR040W PST2Q12335 198 aaKnown RBP6.07□□□□□ -1.44
GEF1YJR040W WTM1Q12363 437 aaKnown RBP6.07□□□□□ -1.44
GEF1YJR040W YCK1P23291 538 aa6.06□□□□□ -1.44
GEF1YJR040W YJU3P28321 313 aa6.06□□□□□ -1.44
GEF1YJR040W ERG9P29704 444 aa6.06□□□□□ -1.44
GEF1YJR040W MRPL6P32904 214 aa6.06□□□□□ -1.44
GEF1YJR040W SCD5P34758 872 aa6.06□□□□□ -1.44
GEF1YJR040W ALY1P36117 915 aa6.06□□□□□ -1.44
GEF1YJR040W BIG1P38813 335 aa6.06□□□□□ -1.44
GEF1YJR040W AIM2P39721 246 aa6.06□□□□□ -1.44
GEF1YJR040W ALG8P40351 577 aa6.06□□□□□ -1.44
GEF1YJR040W YJL016WP47072 561 aa6.06□□□□□ -1.44
GEF1YJR040W PEX13P80667 386 aa6.06□□□□□ -1.44
GEF1YJR040W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
GEF1YJR040W EMI1Q04406 187 aa6.06□□□□□ -1.44
GEF1YJR040W YDR124WQ04608 324 aa6.06□□□□□ -1.44
GEF1YJR040W YPR084WQ06821 456 aa6.06□□□□□ -1.44
GEF1YJR040W HBT1Q07653 1046 aaKnown RBP6.06□□□□□ -1.44
GEF1YJR040W MDM12Q92328 271 aa6.06□□□□□ -1.44
GEF1YJR040W CET1O13297 549 aaPredicted RBP6.05□□□□□ -1.44
GEF1YJR040W RAD52P06778 471 aaKnown RBP6.05□□□□□ -1.44
GEF1YJR040W RPS4AP0CX35 261 aaKnown RBP6.05□□□□□ -1.44
GEF1YJR040W RPS4BP0CX36 261 aaKnown RBP6.05□□□□□ -1.44
GEF1YJR040W STE12P13574 688 aa6.05□□□□□ -1.44
GEF1YJR040W APA1P16550 321 aaKnown RBP6.05□□□□□ -1.44
GEF1YJR040W MRT4P33201 236 aaKnown RBP6.05□□□□□ -1.44
GEF1YJR040W MKS1P34072 584 aa6.05□□□□□ -1.44
GEF1YJR040W FMP52P40008 231 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms