RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W CDC5P32562 705 aa2.35□□□□□ -2.03
TRA1YHR099W PCA1P38360 1216 aa2.35□□□□□ -2.03
TRA1YHR099W CTK3P46963 296 aaPredicted RBP2.35□□□□□ -2.03
TRA1YHR099W JJJ3P47138 172 aa2.35□□□□□ -2.03
TRA1YHR099W LYS4P49367 693 aaPredicted RBP2.35□□□□□ -2.03
TRA1YHR099W RPA14P50106 137 aa2.35□□□□□ -2.03
TRA1YHR099W YNL095CP53932 642 aa2.35□□□□□ -2.03
TRA1YHR099W YPL067CQ02754 198 aa2.35□□□□□ -2.03
TRA1YHR099W RBS1Q05672 457 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W VID22Q05934 901 aa2.35□□□□□ -2.03
TRA1YHR099W ERV2Q12284 196 aa2.35□□□□□ -2.03
TRA1YHR099W RPL25P04456 142 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W BAR1P12630 587 aa2.35□□□□□ -2.03
TRA1YHR099W PDC5P16467 563 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W RAD57P25301 460 aa2.35□□□□□ -2.03
TRA1YHR099W BOS1P25385 244 aa2.35□□□□□ -2.03
TRA1YHR099W RER1P25560 188 aa2.35□□□□□ -2.03
TRA1YHR099W MDH3P32419 343 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
TRA1YHR099W SPS19P32573 292 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W TUL1P36096 758 aa2.35□□□□□ -2.03
TRA1YHR099W BNA4P38169 460 aa2.35□□□□□ -2.03
TRA1YHR099W PHO12P38693 467 aa2.35□□□□□ -2.03
TRA1YHR099W IMD2P38697 523 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W PIC2P40035 300 aa2.35□□□□□ -2.03
TRA1YHR099W MAD2P40958 196 aa2.35□□□□□ -2.03
TRA1YHR099W SPT20P50875 604 aa2.35□□□□□ -2.03
TRA1YHR099W RHO5P53879 331 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W STP1Q00947 519 aa2.35□□□□□ -2.03
TRA1YHR099W YTH1Q06102 208 aaPredicted RBP2.35□□□□□ -2.03
TRA1YHR099W SKG3Q06315 1026 aa2.35□□□□□ -2.03
TRA1YHR099W YPQ2Q06328 317 aa2.35□□□□□ -2.03
TRA1YHR099W RSB1Q08417 382 aa2.35□□□□□ -2.03
TRA1YHR099W YOR365CQ08844 703 aa2.35□□□□□ -2.03
TRA1YHR099W MET32Q12041 191 aa2.35□□□□□ -2.03
TRA1YHR099W APC9Q12107 265 aa2.35□□□□□ -2.03
TRA1YHR099W BOL1Q3E793 110 aa2.35□□□□□ -2.03
TRA1YHR099W TY1B-DR3Q99231 1755 aa2.35□□□□□ -2.03
TRA1YHR099W APA1P16550 321 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W HEM15P16622 393 aa2.35□□□□□ -2.03
TRA1YHR099W PUP1P25043 261 aa2.35□□□□□ -2.03
TRA1YHR099W YBR184WP38299 523 aa2.35□□□□□ -2.03
TRA1YHR099W YFL012WP43580 148 aa2.35□□□□□ -2.03
TRA1YHR099W RPE1P46969 238 aa2.35□□□□□ -2.03
TRA1YHR099W ERG25P53045 309 aa2.35□□□□□ -2.03
TRA1YHR099W SML1Q04964 104 aa2.35□□□□□ -2.03
TRA1YHR099W HEL2Q05580 639 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W BDS1Q08347 646 aa2.35□□□□□ -2.03
TRA1YHR099W CHA1P25379 360 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W RPL16BP26785 198 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W CCR4P31384 837 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W MNL1P38888 796 aa2.35□□□□□ -2.03
TRA1YHR099W TDA10P42938 290 aa2.35□□□□□ -2.03
TRA1YHR099W ZRG17P53735 605 aa2.35□□□□□ -2.03
TRA1YHR099W SMD2Q06217 110 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W YDL114WQ07530 308 aa2.35□□□□□ -2.03
TRA1YHR099W ACK1Q07622 623 aaPredicted RBP2.35□□□□□ -2.03
TRA1YHR099W CDC26P14724 124 aa2.35□□□□□ -2.03
TRA1YHR099W SUA7P29055 345 aaPredicted RBP2.35□□□□□ -2.03
TRA1YHR099W MRX3P38172 270 aa2.35□□□□□ -2.03
TRA1YHR099W YJL193WP39542 402 aa2.35□□□□□ -2.03
TRA1YHR099W HAT2P39984 401 aa2.35□□□□□ -2.03
TRA1YHR099W GIP2P40036 548 aa2.35□□□□□ -2.03
TRA1YHR099W GNA1P43577 159 aaPredicted RBP2.35□□□□□ -2.03
TRA1YHR099W APS2Q00381 147 aa2.35□□□□□ -2.03
TRA1YHR099W HIM1Q06674 414 aa2.35□□□□□ -2.03
TRA1YHR099W RAS2P01120 322 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W IME1P21190 360 aa2.35□□□□□ -2.03
TRA1YHR099W NTF2P33331 125 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W PET10P36139 283 aa2.35□□□□□ -2.03
TRA1YHR099W YBR225WP38321 900 aa2.35□□□□□ -2.03
TRA1YHR099W SMF1P38925 575 aa2.35□□□□□ -2.03
TRA1YHR099W LCB2P40970 561 aa2.35□□□□□ -2.03
TRA1YHR099W PMT4P46971 762 aa2.35□□□□□ -2.03
TRA1YHR099W LSC2P53312 427 aa2.35□□□□□ -2.03
TRA1YHR099W INN1P53901 409 aa2.35□□□□□ -2.03
TRA1YHR099W PEX13P80667 386 aa2.35□□□□□ -2.03
TRA1YHR099W YPL068CQ02749 293 aa2.35□□□□□ -2.03
TRA1YHR099W OPI10Q08202 246 aa2.35□□□□□ -2.03
TRA1YHR099W YPL261CQ08976 102 aa2.35□□□□□ -2.03
TRA1YHR099W TRM11Q12463 433 aa2.35□□□□□ -2.03
TRA1YHR099W MEX67Q99257 599 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W COX9P07255 59 aa2.35□□□□□ -2.03
TRA1YHR099W RPS24AP0CX31 135 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W RPS24BP0CX32 135 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W ARF1P11076 181 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W PMA2P19657 947 aa2.35□□□□□ -2.03
TRA1YHR099W RRP7P25368 297 aaPredicted RBP2.35□□□□□ -2.03
TRA1YHR099W MF(ALPHA)2P32435 120 aa2.35□□□□□ -2.03
TRA1YHR099W GSP1P32835 219 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W PTK1P36002 662 aaPredicted RBP2.35□□□□□ -2.03
TRA1YHR099W ZRG8P40021 1076 aa2.35□□□□□ -2.03
TRA1YHR099W BMT5P40493 336 aa2.35□□□□□ -2.03
TRA1YHR099W YHC3P47040 408 aa2.35□□□□□ -2.03
TRA1YHR099W YGL138CP53122 345 aa2.35□□□□□ -2.03
TRA1YHR099W MRM2P53123 320 aa2.35□□□□□ -2.03
TRA1YHR099W YMR010WQ03687 405 aa2.35□□□□□ -2.03
TRA1YHR099W PML39Q03760 334 aa2.35□□□□□ -2.03
TRA1YHR099W OSW1Q08692 278 aa2.35□□□□□ -2.03
TRA1YHR099W ATP1P07251 545 aaKnown RBP2.35□□□□□ -2.03
TRA1YHR099W VMA1P17255 1071 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms