RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	SPO12	P17123	173 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	MRPL8	P22353	238 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	CTR86	P25355	563 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	BUB3	P26449	341 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	YUR1	P26725	428 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	ACH1	P32316	526 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	DPH5	P32469	300 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA22	YHR060W	FRE1	P32791	686 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	BUD2	P33314	1104 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	RRP3	P38712	501 aa	Known RBP	4.07	□□□□□ -1.76
VMA22	YHR060W	YHR177W	P38867	453 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	LYS1	P38998	373 aa	RIP-Chip data	4.07	□□□□□ -1.76	not detected
VMA22	YHR060W	LCP5	P40079	357 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA22	YHR060W	CSM2	P40465	213 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	YDL186W	P48568	277 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	PKP2	P53170	491 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	PCP1	P53259	346 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	FMP30	Q02883	468 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	ECI1	Q05871	280 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	ORM2	Q06144	216 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	TSR1	Q07381	788 aa	Known RBP	4.07	□□□□□ -1.76
VMA22	YHR060W	TY3A-G	Q12173	290 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	YPR1	Q12458	312 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	RRI1	Q12468	440 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	FMP16	Q12497	93 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	TY3A-I	Q99219	290 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	ARG4	P04076	463 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA22	YHR060W	IMA3	P0CW40	589 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	IMA4	P0CW41	589 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	RPL18A	P0CX49	186 aa	Known RBP	4.06	□□□□□ -1.76
VMA22	YHR060W	RPL18B	P0CX50	186 aa	Known RBP	4.06	□□□□□ -1.76
VMA22	YHR060W	DBR1	P24309	405 aa	Known RBP	4.06	□□□□□ -1.76
VMA22	YHR060W	COQ3	P27680	312 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	CIN8	P27895	1000 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	PPZ2	P33329	710 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	PHD1	P36093	366 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	SSN8	P47821	323 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	YGL185C	P53100	379 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	GIM3	P53900	129 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	SLD5	Q03406	294 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	RSN1	Q03516	953 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	BUR2	Q05949	395 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	VPS74	Q06385	345 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	YLL007C	Q07799	665 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	IMA2	Q08295	589 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	DNL4	Q08387	944 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA22	YHR060W	NRT1	Q08485	598 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	YOL107W	Q12239	342 aa		4.06	□□□□□ -1.76
VMA22	YHR060W	PAA1	Q12447	191 aa	Known RBP	4.06	□□□□□ -1.76
VMA22	YHR060W	OPI3	P05375	206 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	TUB1	P09733	447 aa	Known RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	URE2	P23202	354 aa	Known RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	MGR1	P25573	417 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	RPL5	P26321	297 aa	Known RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	VMA5	P31412	392 aa	Known RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	SPR1	P32603	445 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	RAD23	P32628	398 aa	Known RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	SKG6	P32900	734 aa	Predicted RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	ECT1	P33412	323 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	SKT5	P34226	696 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	TAE1	P38340	232 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	STP2	P38704	541 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	ISC1	P40015	477 aa	Known RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	SEC9	P40357	651 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	FMC1	P40491	155 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
VMA22	YHR060W	MRX5	P47007	382 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	STE24	P47154	453 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	YIP1	P53039	248 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	YGL242C	P53066	181 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	YNL181W	P53878	407 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	NUP100	Q02629	959 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	YPL068C	Q02749	293 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	PET117	Q02771	107 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	YMR102C	Q03177	834 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	BET5	Q03630	159 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	INP2	Q03824	705 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	COQ11	Q05892	277 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	DIC1	Q06143	298 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	YPR172W	Q06608	200 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	MUM3	Q08750	479 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	SLF1	Q12034	447 aa	Known RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	BTS1	Q12051	335 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	AIM45	Q12480	344 aa	Known RBP	4.05	□□□□□ -1.76
VMA22	YHR060W	YLR111W	Q12528	110 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	ADF1	Q2V2Q1	113 aa		4.05	□□□□□ -1.76
VMA22	YHR060W	TPK3	P05986	398 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	ATP1	P07251	545 aa	Known RBP	4.04	□□□□□ -1.76
VMA22	YHR060W	LSB5	P25369	354 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	ADY2	P25613	283 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	DOA4	P32571	926 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	SUA5	P32579	426 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	RPT5	P33297	434 aa	Known RBP	4.04	□□□□□ -1.76
VMA22	YHR060W	CUE2	P36075	443 aa	Known RBP	4.04	□□□□□ -1.76
VMA22	YHR060W	YCR041W	P37265	110 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	SHO1	P40073	367 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	BTT1	P40314	149 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA22	YHR060W	ATP23	P53722	227 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	SAM50	P53969	484 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	RVB1	Q03940	463 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms