RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C ASC1P38011 319 aaKnown RBP3.3□□□□□ -1.88
CUP1-2YHR055C YER079WP40052 210 aaKnown RBP3.3□□□□□ -1.88
CUP1-2YHR055C MAM33P40513 266 aa3.3□□□□□ -1.88
CUP1-2YHR055C YPS6P40583 537 aa3.3□□□□□ -1.88
CUP1-2YHR055C HAC1P41546 238 aa3.3□□□□□ -1.88
CUP1-2YHR055C TOM22P49334 152 aa3.3□□□□□ -1.88
CUP1-2YHR055C PRP42Q03776 544 aaKnown RBP3.3□□□□□ -1.88
CUP1-2YHR055C RIF2Q06208 395 aa3.3□□□□□ -1.88
CUP1-2YHR055C MDM36Q06820 579 aa3.3□□□□□ -1.88
CUP1-2YHR055C YGK3Q12222 375 aaPredicted RBP3.3□□□□□ -1.88
CUP1-2YHR055C NCA2Q12374 616 aa3.3□□□□□ -1.88
CUP1-2YHR055C COX3P00420 269 aa3.29□□□□□ -1.88
CUP1-2YHR055C DST1P07273 309 aa3.29□□□□□ -1.88
CUP1-2YHR055C RPB5P20434 215 aa3.29□□□□□ -1.88
CUP1-2YHR055C PHA2P32452 334 aa3.29□□□□□ -1.88
CUP1-2YHR055C HEL1P36113 551 aa3.29□□□□□ -1.88
CUP1-2YHR055C RTC2P38279 296 aa3.29□□□□□ -1.88
CUP1-2YHR055C MIG3P39943 394 aa3.29□□□□□ -1.88
CUP1-2YHR055C TOS3P43637 560 aa3.29□□□□□ -1.88
CUP1-2YHR055C BIR1P47134 954 aa3.29□□□□□ -1.88
CUP1-2YHR055C TCB2P48231 1178 aa3.29□□□□□ -1.88
CUP1-2YHR055C AIM32Q04689 311 aa3.29□□□□□ -1.88
CUP1-2YHR055C RTN1Q04947 295 aaKnown RBP3.29□□□□□ -1.88
CUP1-2YHR055C SNT309Q06091 175 aaPredicted RBP3.29□□□□□ -1.88
CUP1-2YHR055C SMF3Q12078 473 aaPredicted RBP3.29□□□□□ -1.88
CUP1-2YHR055C CDC21P06785 304 aa3.28□□□□□ -1.88
CUP1-2YHR055C HSP26P15992 214 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
CUP1-2YHR055C MDH1P17505 334 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
CUP1-2YHR055C AAT2P23542 418 aaKnown RBP3.28□□□□□ -1.88
CUP1-2YHR055C EXG1P23776 448 aaKnown RBP3.28□□□□□ -1.88
CUP1-2YHR055C HSP104P31539 908 aaKnown RBP3.28□□□□□ -1.88
CUP1-2YHR055C ZTA1P38230 334 aaKnown RBP3.28□□□□□ -1.88
CUP1-2YHR055C SER3P40054 469 aa3.28□□□□□ -1.88
CUP1-2YHR055C MMF1P40185 145 aaKnown RBP3.28□□□□□ -1.88
CUP1-2YHR055C AIM24P47127 394 aa3.28□□□□□ -1.88
CUP1-2YHR055C PIB2P53191 635 aa3.28□□□□□ -1.88
CUP1-2YHR055C RRP46P53256 223 aaPredicted RBP3.28□□□□□ -1.88
CUP1-2YHR055C YMR102CQ03177 834 aa3.28□□□□□ -1.88
CUP1-2YHR055C TSA2Q04120 196 aa3.28□□□□□ -1.88
CUP1-2YHR055C LIP2Q06005 328 aa3.28□□□□□ -1.88
CUP1-2YHR055C LOT6Q07923 191 aa3.28□□□□□ -1.88
CUP1-2YHR055C SMC5Q08204 1093 aa3.28□□□□□ -1.88
CUP1-2YHR055C EAF3Q12432 401 aa3.28□□□□□ -1.88
CUP1-2YHR055C ATP1P07251 545 aaKnown RBP3.27□□□□□ -1.89
CUP1-2YHR055C CAP2P13517 287 aa3.27□□□□□ -1.89
CUP1-2YHR055C ARO3P14843 370 aaKnown RBP3.27□□□□□ -1.89
CUP1-2YHR055C RIM1P32445 135 aaKnown RBP3.27□□□□□ -1.89
CUP1-2YHR055C SIM1P40472 476 aa3.27□□□□□ -1.89
CUP1-2YHR055C LCB3P47013 409 aa3.27□□□□□ -1.89
CUP1-2YHR055C MST27P53176 234 aa3.27□□□□□ -1.89
CUP1-2YHR055C YGR111WP53265 400 aa3.27□□□□□ -1.89
CUP1-2YHR055C CMS1Q07897 291 aaKnown RBP3.27□□□□□ -1.89
CUP1-2YHR055C AHC1Q12433 566 aa3.27□□□□□ -1.89
CUP1-2YHR055C PIS1P06197 220 aaKnown RBP3.26□□□□□ -1.89
CUP1-2YHR055C COX13P32799 129 aa3.26□□□□□ -1.89
CUP1-2YHR055C SPT10P35208 640 aa3.26□□□□□ -1.89
CUP1-2YHR055C MRP21P38175 177 aa3.26□□□□□ -1.89
CUP1-2YHR055C PRM6Q04705 352 aa3.26□□□□□ -1.89
CUP1-2YHR055C YLR345WQ06137 509 aa3.26□□□□□ -1.89
CUP1-2YHR055C HTZ1Q12692 134 aaKnown RBP3.26□□□□□ -1.89
CUP1-2YHR055C DPH5P32469 300 aaPredicted RBP3.25□□□□□ -1.89
CUP1-2YHR055C SKN1P33336 771 aa3.25□□□□□ -1.89
CUP1-2YHR055C MID2P36027 376 aa3.25□□□□□ -1.89
CUP1-2YHR055C INM1P38710 295 aa3.25□□□□□ -1.89
CUP1-2YHR055C STN1P38960 494 aa3.25□□□□□ -1.89
CUP1-2YHR055C OXA1P39952 402 aa3.25□□□□□ -1.89
CUP1-2YHR055C DCI1Q08558 271 aa3.25□□□□□ -1.89
CUP1-2YHR055C POM152P39685 1337 aa3.24□□□□□ -1.89
CUP1-2YHR055C PDE2P06776 526 aa3.24□□□□□ -1.89
CUP1-2YHR055C FAD1P38913 306 aa3.24□□□□□ -1.89
CUP1-2YHR055C CLD1P53264 445 aa3.24□□□□□ -1.89
CUP1-2YHR055C CRH1P53301 507 aa3.24□□□□□ -1.89
CUP1-2YHR055C SPR6Q01684 191 aa3.24□□□□□ -1.89
CUP1-2YHR055C YLR456WQ06199 204 aa3.24□□□□□ -1.89
CUP1-2YHR055C IES6P32617 166 aa3.23□□□□□ -1.89
CUP1-2YHR055C YEF1P32622 495 aa3.23□□□□□ -1.89
CUP1-2YHR055C LTV1P34078 463 aa3.23□□□□□ -1.89
CUP1-2YHR055C SRP72P38688 640 aaKnown RBP3.23□□□□□ -1.89
CUP1-2YHR055C YHK8P38776 514 aa3.23□□□□□ -1.89
CUP1-2YHR055C YGR117CP53270 476 aa3.23□□□□□ -1.89
CUP1-2YHR055C TDA1Q03533 586 aa3.23□□□□□ -1.89
CUP1-2YHR055C SMC6Q12749 1114 aa3.23□□□□□ -1.89
CUP1-2YHR055C ALG1P16661 449 aa3.22□□□□□ -1.89
CUP1-2YHR055C SLM5P25345 492 aaKnown RBP3.22□□□□□ -1.89
CUP1-2YHR055C RAD5P32849 1169 aaPredicted RBP3.22□□□□□ -1.89
CUP1-2YHR055C SKT5P34226 696 aa3.22□□□□□ -1.89
CUP1-2YHR055C YKL097CP34245 136 aa3.22□□□□□ -1.89
CUP1-2YHR055C YNL208WP40159 199 aaKnown RBP3.22□□□□□ -1.89
CUP1-2YHR055C CHS6P40955 746 aa3.22□□□□□ -1.89
CUP1-2YHR055C EGT2P42835 1041 aa3.22□□□□□ -1.89
CUP1-2YHR055C YET2Q04210 160 aa3.22□□□□□ -1.89
CUP1-2YHR055C YDR341CQ05506 607 aaKnown RBP3.22□□□□□ -1.89
CUP1-2YHR055C NSE1Q07913 336 aa3.22□□□□□ -1.89
CUP1-2YHR055C PHO91P27514 894 aa3.21□□□□□ -1.9
CUP1-2YHR055C STP2P38704 541 aa3.21□□□□□ -1.9
CUP1-2YHR055C BAT1P38891 393 aaKnown RBP3.21□□□□□ -1.9
CUP1-2YHR055C ATG18P43601 500 aa3.21□□□□□ -1.9
CUP1-2YHR055C BNS1P50084 137 aa3.21□□□□□ -1.9
CUP1-2YHR055C TRM112P53738 135 aaPredicted RBP3.21□□□□□ -1.9
CUP1-2YHR055C CIK1Q01649 594 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms