RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W ACO2P39533 789 aa3.4□□□□□ -1.87
CAF130YGR134W RPC17P47076 161 aa3.4□□□□□ -1.87
CAF130YGR134W VOA1P53262 265 aa3.4□□□□□ -1.87
CAF130YGR134W RRN9P53437 365 aa3.4□□□□□ -1.87
CAF130YGR134W MRPL22P53881 309 aa3.4□□□□□ -1.87
CAF130YGR134W DIS3Q08162 1001 aaKnown RBP3.4□□□□□ -1.87
CAF130YGR134W YOR029WQ12243 111 aa3.4□□□□□ -1.87
CAF130YGR134W PDE1P22434 369 aa3.39□□□□□ -1.87
CAF130YGR134W BOS1P25385 244 aa3.39□□□□□ -1.87
CAF130YGR134W APL1P27351 700 aa3.39□□□□□ -1.87
CAF130YGR134W RIM1P32445 135 aaKnown RBP3.39□□□□□ -1.87
CAF130YGR134W DOA1P36037 715 aa3.39□□□□□ -1.87
CAF130YGR134W MIA40P36046 403 aa3.39□□□□□ -1.87
CAF130YGR134W APT2P36973 181 aa3.39□□□□□ -1.87
CAF130YGR134W PRS4P38063 326 aaPredicted RBP3.39□□□□□ -1.87
CAF130YGR134W CTP1P38152 299 aa3.39□□□□□ -1.87
CAF130YGR134W SAD1P43589 448 aa3.39□□□□□ -1.87
CAF130YGR134W HST3P53687 447 aa3.39□□□□□ -1.87
CAF130YGR134W GTO3Q04806 366 aa3.39□□□□□ -1.87
CAF130YGR134W ASR1Q06834 288 aa3.39□□□□□ -1.87
CAF130YGR134W NRT1Q08485 598 aa3.39□□□□□ -1.87
CAF130YGR134W YOL107WQ12239 342 aa3.39□□□□□ -1.87
CAF130YGR134W PRP46Q12417 451 aaPredicted RBP3.39□□□□□ -1.87
CAF130YGR134W STE2D6VTK4 431 aa3.39□□□□□ -1.87
CAF130YGR134W GAL10P04397 699 aa3.39□□□□□ -1.87
CAF130YGR134W RHO1P06780 209 aaKnown RBP3.39□□□□□ -1.87
CAF130YGR134W SAM1P10659 382 aaKnown RBP3.39□□□□□ -1.87
CAF130YGR134W RHB1P25378 209 aa3.39□□□□□ -1.87
CAF130YGR134W GBP2P25555 427 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
CAF130YGR134W ATP11P32453 318 aa3.39□□□□□ -1.87
CAF130YGR134W SPO23P33757 523 aa3.39□□□□□ -1.87
CAF130YGR134W YEL020CP39994 560 aa3.39□□□□□ -1.87
CAF130YGR134W MRX5P47007 382 aa3.39□□□□□ -1.87
CAF130YGR134W TIS11P47977 285 aa3.39□□□□□ -1.87
CAF130YGR134W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
CAF130YGR134W GRE1Q08969 168 aa3.39□□□□□ -1.87
CAF130YGR134W PMR1P13586 950 aa3.38□□□□□ -1.87
CAF130YGR134W ATP10P18496 279 aa3.38□□□□□ -1.87
CAF130YGR134W CLB2P24869 491 aa3.38□□□□□ -1.87
CAF130YGR134W YKL187CP34231 750 aa3.38□□□□□ -1.87
CAF130YGR134W PHO90P39535 881 aa3.38□□□□□ -1.87
CAF130YGR134W UBC11P52492 156 aa3.38□□□□□ -1.87
CAF130YGR134W COS1P53822 381 aa3.38□□□□□ -1.87
CAF130YGR134W SED5Q01590 340 aa3.38□□□□□ -1.87
CAF130YGR134W YDL177CQ12257 170 aa3.38□□□□□ -1.87
CAF130YGR134W YRF1-2P40105 1681 aa3.38□□□□□ -1.87
CAF130YGR134W KIN2P13186 1147 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W CLN3P13365 580 aa3.38□□□□□ -1.87
CAF130YGR134W FAR1P21268 830 aa3.38□□□□□ -1.87
CAF130YGR134W VMA16P23968 213 aa3.38□□□□□ -1.87
CAF130YGR134W GAR1P28007 205 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W BEM1P29366 551 aa3.38□□□□□ -1.87
CAF130YGR134W SPR1P32603 445 aa3.38□□□□□ -1.87
CAF130YGR134W RGT1P32862 1170 aa3.38□□□□□ -1.87
CAF130YGR134W RPF2P36160 344 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W RIB1P38066 345 aa3.38□□□□□ -1.87
CAF130YGR134W UBA4P38820 440 aa3.38□□□□□ -1.87
CAF130YGR134W TFG2P41896 400 aaPredicted RBP3.38□□□□□ -1.87
CAF130YGR134W QRI1P43123 477 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W YNL260CP53846 198 aa3.38□□□□□ -1.87
CAF130YGR134W NUP53Q03790 475 aa3.38□□□□□ -1.87
CAF130YGR134W YDR222WQ04925 415 aa3.38□□□□□ -1.87
CAF130YGR134W GGA1Q06336 557 aa3.38□□□□□ -1.87
CAF130YGR134W MES1P00958 751 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W RAD52P06778 471 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W DBR1P24309 405 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W SOR1P35497 357 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W EGD2P38879 174 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W NPT1P39683 429 aaKnown RBP3.38□□□□□ -1.87
CAF130YGR134W BUR6P40096 142 aa3.38□□□□□ -1.87
CAF130YGR134W SAS2P40963 338 aa3.38□□□□□ -1.87
CAF130YGR134W YJL118WP47022 219 aa3.38□□□□□ -1.87
CAF130YGR134W ABM1P47146 123 aa3.38□□□□□ -1.87
CAF130YGR134W RSM24Q03976 319 aa3.38□□□□□ -1.87
CAF130YGR134W GMC2Q06201 188 aa3.38□□□□□ -1.87
CAF130YGR134W RAD34Q06665 692 aa3.38□□□□□ -1.87
CAF130YGR134W SOR2Q07786 357 aa3.38□□□□□ -1.87
CAF130YGR134W COR1P07256 457 aa3.37□□□□□ -1.87
CAF130YGR134W RPL18AP0CX49 186 aaKnown RBP3.37□□□□□ -1.87
CAF130YGR134W RPL18BP0CX50 186 aaKnown RBP3.37□□□□□ -1.87
CAF130YGR134W ZRC1P20107 442 aa3.37□□□□□ -1.87
CAF130YGR134W CTR86P25355 563 aa3.37□□□□□ -1.87
CAF130YGR134W KAR4P25583 335 aa3.37□□□□□ -1.87
CAF130YGR134W RRP4P38792 359 aaKnown RBP3.37□□□□□ -1.87
CAF130YGR134W RIX1P38883 763 aaPredicted RBP3.37□□□□□ -1.87
CAF130YGR134W PLB1P39105 664 aa3.37□□□□□ -1.87
CAF130YGR134W JJJ3P47138 172 aa3.37□□□□□ -1.87
CAF130YGR134W GPN3Q06543 272 aa3.37□□□□□ -1.87
CAF130YGR134W AAD15Q08361 143 aa3.37□□□□□ -1.87
CAF130YGR134W SPO24Q3E752 67 aa3.37□□□□□ -1.87
CAF130YGR134W YER175W-AQ8TGU4 54 aa3.37□□□□□ -1.87
CAF130YGR134W UBA3Q99344 299 aa3.37□□□□□ -1.87
CAF130YGR134W URB1P34241 1764 aaKnown RBP3.37□□□□□ -1.87
CAF130YGR134W CYC1P00044 109 aaPredicted RBP3.37□□□□□ -1.87
CAF130YGR134W PMA2P19657 947 aa3.37□□□□□ -1.87
CAF130YGR134W MAK32P23060 363 aa3.37□□□□□ -1.87
CAF130YGR134W RPS2P25443 254 aaKnown RBP3.37□□□□□ -1.87
CAF130YGR134W FET3P38993 636 aa3.37□□□□□ -1.87
CAF130YGR134W SAP1P39955 897 aaKnown RBP3.37□□□□□ -1.87
CAF130YGR134W BNA6P43619 295 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms