RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C RDR1Q08904 546 aa1.99□□□□□ -2.09
PRE4YFR050C SPO7P18410 259 aa1.98□□□□□ -2.09
PRE4YFR050C YRA2P36036 203 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
PRE4YFR050C ALY1P36117 915 aa1.98□□□□□ -2.09
PRE4YFR050C PSD1P39006 500 aa1.98□□□□□ -2.09
PRE4YFR050C BUR6P40096 142 aa1.98□□□□□ -2.09
PRE4YFR050C HXT9P40885 567 aa1.98□□□□□ -2.09
PRE4YFR050C AZF1P41696 914 aa1.98□□□□□ -2.09
PRE4YFR050C ATG27P46989 271 aa1.98□□□□□ -2.09
PRE4YFR050C RTT101P47050 842 aa1.98□□□□□ -2.09
PRE4YFR050C HSH155P49955 971 aaKnown RBP1.98□□□□□ -2.09
PRE4YFR050C HOS2P53096 452 aaPredicted RBP1.98□□□□□ -2.09
PRE4YFR050C YGR021WP53212 290 aa1.98□□□□□ -2.09
PRE4YFR050C RNY1Q02933 434 aaKnown RBP1.98□□□□□ -2.09
PRE4YFR050C RCO1Q04779 684 aa1.98□□□□□ -2.09
PRE4YFR050C YMR317WQ04893 1140 aa1.98□□□□□ -2.09
PRE4YFR050C PML1Q07930 204 aaPredicted RBP1.98□□□□□ -2.09
PRE4YFR050C BSC1Q12140 328 aa1.98□□□□□ -2.09
PRE4YFR050C INP53Q12271 1107 aa1.98□□□□□ -2.09
PRE4YFR050C FLO9P39712 1322 aa1.97□□□□□ -2.09
PRE4YFR050C BAR1P12630 587 aa1.97□□□□□ -2.09
PRE4YFR050C CTA1P15202 515 aa1.97□□□□□ -2.09
PRE4YFR050C MRP20P32387 263 aa1.97□□□□□ -2.09
PRE4YFR050C RIM2P38127 377 aa1.97□□□□□ -2.09
PRE4YFR050C TRM7P38238 310 aaKnown RBP1.97□□□□□ -2.09
PRE4YFR050C UIP3P39547 235 aa1.97□□□□□ -2.09
PRE4YFR050C YER010CP40011 234 aa1.97□□□□□ -2.09
PRE4YFR050C YIL060WP40519 144 aa1.97□□□□□ -2.09
PRE4YFR050C YJR054WP47114 497 aa1.97□□□□□ -2.09
PRE4YFR050C DIA3P52290 468 aa1.97□□□□□ -2.09
PRE4YFR050C YPL077CQ02831 240 aa1.97□□□□□ -2.09
PRE4YFR050C PRP3Q03338 469 aaPredicted RBP1.97□□□□□ -2.09
PRE4YFR050C FUS2Q05670 677 aa1.97□□□□□ -2.09
PRE4YFR050C GAS2Q06135 555 aa1.97□□□□□ -2.09
PRE4YFR050C ATG26Q06321 1198 aa1.97□□□□□ -2.09
PRE4YFR050C PSR1Q07800 427 aa1.97□□□□□ -2.09
PRE4YFR050C DIS3Q08162 1001 aaKnown RBP1.97□□□□□ -2.09
PRE4YFR050C LEU9Q12166 604 aaKnown RBP1.97□□□□□ -2.09
PRE4YFR050C ARG81P05085 880 aa1.96□□□□□ -2.1
PRE4YFR050C RPB2P08518 1224 aaKnown RBP1.96□□□□□ -2.1
PRE4YFR050C VMA16P23968 213 aa1.96□□□□□ -2.1
PRE4YFR050C MXR2P25566 168 aa1.96□□□□□ -2.1
PRE4YFR050C ERG9P29704 444 aa1.96□□□□□ -2.1
PRE4YFR050C PMT2P31382 759 aa1.96□□□□□ -2.1
PRE4YFR050C MRPS5P33759 307 aa1.96□□□□□ -2.1
PRE4YFR050C KKQ8P36004 724 aa1.96□□□□□ -2.1
PRE4YFR050C YNK1P36010 153 aaKnown RBP1.96□□□□□ -2.1
PRE4YFR050C SRP72P38688 640 aaKnown RBP1.96□□□□□ -2.1
PRE4YFR050C DIA4P38705 446 aaPredicted RBP1.96□□□□□ -2.1
PRE4YFR050C DBP8P38719 431 aa1.96□□□□□ -2.1
PRE4YFR050C ARN2P38724 620 aa1.96□□□□□ -2.1
PRE4YFR050C ANS1P38832 159 aa1.96□□□□□ -2.1
PRE4YFR050C YHR182WP38870 785 aa1.96□□□□□ -2.1
PRE4YFR050C RGI2P40188 164 aa1.96□□□□□ -2.1
PRE4YFR050C YJL068CP40363 299 aa1.96□□□□□ -2.1
PRE4YFR050C YIR014WP40570 242 aa1.96□□□□□ -2.1
PRE4YFR050C BNA1P47096 177 aa1.96□□□□□ -2.1
PRE4YFR050C STR3P53101 465 aaKnown RBP1.96□□□□□ -2.1
PRE4YFR050C SWC4P53201 476 aa1.96□□□□□ -2.1
PRE4YFR050C EMI1Q04406 187 aa1.96□□□□□ -2.1
PRE4YFR050C SNO4Q04902 237 aa1.96□□□□□ -2.1
PRE4YFR050C YTH1Q06102 208 aaPredicted RBP1.96□□□□□ -2.1
PRE4YFR050C YPR114WQ06107 315 aa1.96□□□□□ -2.1
PRE4YFR050C YLR036CQ07986 203 aa1.96□□□□□ -2.1
PRE4YFR050C YOL159CQ08300 171 aa1.96□□□□□ -2.1
PRE4YFR050C HSP33Q08914 237 aaKnown RBP1.96□□□□□ -2.1
PRE4YFR050C HSP32Q08992 237 aa1.96□□□□□ -2.1
PRE4YFR050C ATG9Q12142 997 aa1.96□□□□□ -2.1
PRE4YFR050C YPR064WQ12492 139 aa1.96□□□□□ -2.1
PRE4YFR050C YGR035W-AQ45U48 73 aa1.96□□□□□ -2.1
PRE4YFR050C YML002WP0CF17 737 aa1.95□□□□□ -2.1
PRE4YFR050C MRS3P10566 314 aa1.95□□□□□ -2.1
PRE4YFR050C CDC23P16522 626 aa1.95□□□□□ -2.1
PRE4YFR050C MRPL8P22353 238 aa1.95□□□□□ -2.1
PRE4YFR050C EFB1P32471 206 aaKnown RBP1.95□□□□□ -2.1
PRE4YFR050C SAS3P34218 831 aa1.95□□□□□ -2.1
PRE4YFR050C SNU114P36048 1008 aaKnown RBP1.95□□□□□ -2.1
PRE4YFR050C PHD1P36093 366 aa1.95□□□□□ -2.1
PRE4YFR050C VPS24P36095 224 aaKnown RBP1.95□□□□□ -2.1
PRE4YFR050C LRP1P38801 184 aaKnown RBP1.95□□□□□ -2.1
PRE4YFR050C PHO90P39535 881 aa1.95□□□□□ -2.1
PRE4YFR050C IES5P40060 125 aa1.95□□□□□ -2.1
PRE4YFR050C GDS1P41913 522 aa1.95□□□□□ -2.1
PRE4YFR050C PKP2P53170 491 aa1.95□□□□□ -2.1
PRE4YFR050C RSC1P53236 928 aa1.95□□□□□ -2.1
PRE4YFR050C RET3P53600 189 aa1.95□□□□□ -2.1
PRE4YFR050C CBK1P53894 756 aa1.95□□□□□ -2.1
PRE4YFR050C NUP100Q02629 959 aa1.95□□□□□ -2.1
PRE4YFR050C SSK1Q07084 712 aa1.95□□□□□ -2.1
PRE4YFR050C TCO89Q08921 799 aa1.95□□□□□ -2.1
PRE4YFR050C RER1P25560 188 aa1.94□□□□□ -2.1
PRE4YFR050C CMK1P27466 446 aaKnown RBP1.94□□□□□ -2.1
PRE4YFR050C BUD14P27637 709 aa1.94□□□□□ -2.1
PRE4YFR050C SEC1P30619 724 aaKnown RBP1.94□□□□□ -2.1
PRE4YFR050C PDB1P32473 366 aaKnown RBP1.94□□□□□ -2.1
PRE4YFR050C ERG1P32476 496 aaKnown RBP1.94□□□□□ -2.1
PRE4YFR050C ROT2P38138 954 aa1.94□□□□□ -2.1
PRE4YFR050C FUI1P38196 639 aa1.94□□□□□ -2.1
PRE4YFR050C IML3P38265 245 aa1.94□□□□□ -2.1
PRE4YFR050C SIP3P38717 1229 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 223.9 ms