RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C WHI2P12611 486 aa6.15□□□□□ -1.42
SHO1YER118C ZRC1P20107 442 aa6.15□□□□□ -1.42
SHO1YER118C PPA2P28239 310 aa6.15□□□□□ -1.42
SHO1YER118C SAC1P32368 623 aaKnown RBP6.15□□□□□ -1.42
SHO1YER118C GCG1P32656 232 aaKnown RBP6.15□□□□□ -1.42
SHO1YER118C ARP1P38696 384 aa6.15□□□□□ -1.42
SHO1YER118C MTW1P39731 289 aa6.15□□□□□ -1.42
SHO1YER118C DSE1P40077 573 aa6.15□□□□□ -1.42
SHO1YER118C LCP5P40079 357 aaPredicted RBP6.15□□□□□ -1.42
SHO1YER118C SYG1P40528 902 aa6.15□□□□□ -1.42
SHO1YER118C PYK2P52489 506 aaKnown RBP6.15□□□□□ -1.42
SHO1YER118C PMT5P52867 743 aa6.15□□□□□ -1.42
SHO1YER118C YTP1P53584 459 aa6.15□□□□□ -1.42
SHO1YER118C GIM5Q04493 163 aa6.15□□□□□ -1.42
SHO1YER118C BUR2Q05949 395 aa6.15□□□□□ -1.42
SHO1YER118C GMC2Q06201 188 aa6.15□□□□□ -1.42
SHO1YER118C YLR040CQ07988 224 aa6.15□□□□□ -1.42
SHO1YER118C SLF1Q12034 447 aaKnown RBP6.15□□□□□ -1.42
SHO1YER118C OPI3P05375 206 aa6.14□□□□□ -1.43
SHO1YER118C RPS16AP0CX51 143 aaKnown RBP6.14□□□□□ -1.43
SHO1YER118C RPS16BP0CX52 143 aaKnown RBP6.14□□□□□ -1.43
SHO1YER118C TYR1P20049 452 aa6.14□□□□□ -1.43
SHO1YER118C TKL1P23254 680 aaKnown RBP6.14□□□□□ -1.43
SHO1YER118C YSR3P23501 404 aa6.14□□□□□ -1.43
SHO1YER118C RAD57P25301 460 aa6.14□□□□□ -1.43
SHO1YER118C RRT12P25381 491 aa6.14□□□□□ -1.43
SHO1YER118C MIA40P36046 403 aa6.14□□□□□ -1.43
SHO1YER118C YER079WP40052 210 aaKnown RBP6.14□□□□□ -1.43
SHO1YER118C MRX5P47007 382 aa6.14□□□□□ -1.43
SHO1YER118C LIF1P53150 421 aa6.14□□□□□ -1.43
SHO1YER118C DUG3P53871 357 aa6.14□□□□□ -1.43
SHO1YER118C RPM2Q02773 1202 aa6.14□□□□□ -1.43
SHO1YER118C SNU56Q03782 492 aaKnown RBP6.14□□□□□ -1.43
SHO1YER118C YDR132CQ03900 495 aa6.14□□□□□ -1.43
SHO1YER118C GFD1Q04839 188 aaKnown RBP6.14□□□□□ -1.43
SHO1YER118C SNT309Q06091 175 aaPredicted RBP6.14□□□□□ -1.43
SHO1YER118C YOL075CQ08234 1294 aa6.14□□□□□ -1.43
SHO1YER118C ADH2P00331 348 aaKnown RBP6.13□□□□□ -1.43
SHO1YER118C RAD52P06778 471 aaKnown RBP6.13□□□□□ -1.43
SHO1YER118C DST1P07273 309 aa6.13□□□□□ -1.43
SHO1YER118C CKI1P20485 582 aa6.13□□□□□ -1.43
SHO1YER118C PTR2P32901 601 aa6.13□□□□□ -1.43
SHO1YER118C YKL162CP36052 402 aa6.13□□□□□ -1.43
SHO1YER118C LDB7P38210 180 aa6.13□□□□□ -1.43
SHO1YER118C BIG1P38813 335 aa6.13□□□□□ -1.43
SHO1YER118C EGD2P38879 174 aaKnown RBP6.13□□□□□ -1.43
SHO1YER118C YEL020CP39994 560 aa6.13□□□□□ -1.43
SHO1YER118C BTT1P40314 149 aaPredicted RBP6.13□□□□□ -1.43
SHO1YER118C POP1P41812 875 aa6.13□□□□□ -1.43
SHO1YER118C PMT6P42934 759 aa6.13□□□□□ -1.43
SHO1YER118C UBP8P50102 471 aa6.13□□□□□ -1.43
SHO1YER118C YPR003CP53394 754 aa6.13□□□□□ -1.43
SHO1YER118C MRPL50P53724 139 aa6.13□□□□□ -1.43
SHO1YER118C FMP30Q02883 468 aa6.13□□□□□ -1.43
SHO1YER118C GIP3Q03016 1276 aa6.13□□□□□ -1.43
SHO1YER118C UBX2Q04228 584 aa6.13□□□□□ -1.43
SHO1YER118C YMR226CQ05016 267 aaKnown RBP6.13□□□□□ -1.43
SHO1YER118C CMS1Q07897 291 aaKnown RBP6.13□□□□□ -1.43
SHO1YER118C SRO7Q12038 1033 aa6.13□□□□□ -1.43
SHO1YER118C SUT2Q12286 268 aa6.13□□□□□ -1.43
SHO1YER118C AHA1Q12449 350 aaKnown RBP6.13□□□□□ -1.43
SHO1YER118C RHO1P06780 209 aaKnown RBP6.12□□□□□ -1.43
SHO1YER118C CDC33P07260 213 aaKnown RBP6.12□□□□□ -1.43
SHO1YER118C IMA3P0CW40 589 aa6.12□□□□□ -1.43
SHO1YER118C IMA4P0CW41 589 aa6.12□□□□□ -1.43
SHO1YER118C RPL24BP24000 155 aaKnown RBP6.12□□□□□ -1.43
SHO1YER118C CLB2P24869 491 aa6.12□□□□□ -1.43
SHO1YER118C SLM5P25345 492 aaKnown RBP6.12□□□□□ -1.43
SHO1YER118C FUN19P28003 413 aaPredicted RBP6.12□□□□□ -1.43
SHO1YER118C MRPL9P31334 269 aa6.12□□□□□ -1.43
SHO1YER118C RAD24P32641 659 aa6.12□□□□□ -1.43
SHO1YER118C GDH2P33327 1092 aaKnown RBP6.12□□□□□ -1.43
SHO1YER118C SMF2P38778 549 aa6.12□□□□□ -1.43
SHO1YER118C SDS3P40505 327 aa6.12□□□□□ -1.43
SHO1YER118C LYS20P48570 428 aaKnown RBP6.12□□□□□ -1.43
SHO1YER118C YGR168CP53293 376 aa6.12□□□□□ -1.43
SHO1YER118C YVH1Q02256 364 aaKnown RBP6.12□□□□□ -1.43
SHO1YER118C YPL068CQ02749 293 aa6.12□□□□□ -1.43
SHO1YER118C SMP3Q04174 516 aa6.12□□□□□ -1.43
SHO1YER118C ATG26Q06321 1198 aa6.12□□□□□ -1.43
SHO1YER118C SDO1Q07953 250 aaKnown RBP6.12□□□□□ -1.43
SHO1YER118C IMA2Q08295 589 aa6.12□□□□□ -1.43
SHO1YER118C SIA1Q12212 622 aa6.12□□□□□ -1.43
SHO1YER118C RAD7P06779 565 aa6.11□□□□□ -1.43
SHO1YER118C STE11P23561 717 aa6.11□□□□□ -1.43
SHO1YER118C DOA1P36037 715 aa6.11□□□□□ -1.43
SHO1YER118C PRS4P38063 326 aaPredicted RBP6.11□□□□□ -1.43
SHO1YER118C YPK3P38070 525 aa6.11□□□□□ -1.43
SHO1YER118C HIS2P38635 335 aa6.11□□□□□ -1.43
SHO1YER118C PFS1P38872 237 aa6.11□□□□□ -1.43
SHO1YER118C LYS12P40495 371 aaKnown RBP6.11□□□□□ -1.43
SHO1YER118C ABM1P47146 123 aa6.11□□□□□ -1.43
SHO1YER118C MRPL22P53881 309 aa6.11□□□□□ -1.43
SHO1YER118C RAD34Q06665 692 aa6.11□□□□□ -1.43
SHO1YER118C YLR049CQ12110 428 aa6.11□□□□□ -1.43
SHO1YER118C YDR215CQ12240 137 aa6.11□□□□□ -1.43
SHO1YER118C MAS2P11914 482 aa6.1□□□□□ -1.43
SHO1YER118C CKA2P19454 339 aa6.1□□□□□ -1.43
SHO1YER118C CBP4P37267 147 aa6.1□□□□□ -1.43
SHO1YER118C YAL037WP39728 267 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms