RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM28	YDR494W	DST1	P07273	309 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	CSE2	P33308	149 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	SBE22	P38814	852 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	FAD1	P38913	306 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	BRO1	P48582	844 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	SHY1	P53266	389 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	CIK1	Q01649	594 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	ADA2	Q02336	434 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	GYL1	Q04322	720 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	YLR456W	Q06199	204 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	RUP1	Q12242	671 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	GPM3	Q12326	303 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	NCA2	Q12374	616 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	YDL012C	Q12489	107 aa		2.73	□□□□□ -1.97
RSM28	YDR494W	CDC21	P06785	304 aa		2.72	□□□□□ -1.97
RSM28	YDR494W	HSP104	P31539	908 aa	Known RBP	2.72	□□□□□ -1.97
RSM28	YDR494W	LTV1	P34078	463 aa		2.72	□□□□□ -1.97
RSM28	YDR494W	YHR131C	P38835	850 aa		2.72	□□□□□ -1.97
RSM28	YDR494W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
RSM28	YDR494W	TOS3	P43637	560 aa		2.72	□□□□□ -1.97
RSM28	YDR494W	YJR085C	P47131	105 aa	Known RBP	2.72	□□□□□ -1.97
RSM28	YDR494W	YML6	P51998	286 aa		2.72	□□□□□ -1.97
RSM28	YDR494W	UAF30	Q08747	228 aa		2.72	□□□□□ -1.97
RSM28	YDR494W	PDE2	P06776	526 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	EXG1	P23776	448 aa	Known RBP	2.71	□□□□□ -1.98
RSM28	YDR494W	PHA2	P32452	334 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	INM1	P38710	295 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	STN1	P38960	494 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	MMF1	P40185	145 aa	Known RBP	2.71	□□□□□ -1.98
RSM28	YDR494W	SIM1	P40472	476 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	MRM2	P53123	320 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	ALF1	P53904	254 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	IZH2	Q12442	317 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	CEX1	Q12453	761 aa		2.71	□□□□□ -1.98
RSM28	YDR494W	ATP1	P07251	545 aa	Known RBP	2.7	□□□□□ -1.98
RSM28	YDR494W	CAP2	P13517	287 aa		2.7	□□□□□ -1.98
RSM28	YDR494W	ALG1	P16661	449 aa		2.7	□□□□□ -1.98
RSM28	YDR494W	SKN1	P33336	771 aa		2.7	□□□□□ -1.98
RSM28	YDR494W	YKL097C	P34245	136 aa		2.7	□□□□□ -1.98
RSM28	YDR494W	AIM10	P39965	576 aa	Known RBP	2.7	□□□□□ -1.98
RSM28	YDR494W	CHS6	P40955	746 aa		2.7	□□□□□ -1.98
RSM28	YDR494W	RRP46	P53256	223 aa	Predicted RBP	2.7	□□□□□ -1.98
RSM28	YDR494W	MDM36	Q06820	579 aa		2.7	□□□□□ -1.98
RSM28	YDR494W	JID1	Q12350	301 aa		2.7	□□□□□ -1.98
RSM28	YDR494W	MSI1	P13712	422 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	PHO91	P27514	894 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	COX13	P32799	129 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	STP2	P38704	541 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	GPI16	P38875	610 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	UTP18	P40362	594 aa	Predicted RBP	2.69	□□□□□ -1.98
RSM28	YDR494W	MAM33	P40513	266 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	HAC1	P41546	238 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	YFR057W	P43625	151 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	LCB3	P47013	409 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	TSA2	Q04120	196 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	YDR341C	Q05506	607 aa	Known RBP	2.69	□□□□□ -1.98
RSM28	YDR494W	RIF2	Q06208	395 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	PLP2	Q12017	286 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	SPE3	Q12074	293 aa	Known RBP	2.69	□□□□□ -1.98
RSM28	YDR494W	YGK3	Q12222	375 aa	Predicted RBP	2.69	□□□□□ -1.98
RSM28	YDR494W	EAF3	Q12432	401 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	AHC1	Q12433	566 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	ERP4	Q12450	207 aa		2.69	□□□□□ -1.98
RSM28	YDR494W	SLM5	P25345	492 aa	Known RBP	2.68	□□□□□ -1.98
RSM28	YDR494W	DPH5	P32469	300 aa	Predicted RBP	2.68	□□□□□ -1.98
RSM28	YDR494W	NUP2	P32499	720 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	GAB1	P41733	394 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	YJL055W	P47044	245 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	AIM24	P47127	394 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	BIR1	P47134	954 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	ROG1	P53118	685 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	RSC1	P53236	928 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	SPR6	Q01684	191 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	HAL1	Q01766	294 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	YMR102C	Q03177	834 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	SXM1	Q04175	944 aa	Known RBP	2.68	□□□□□ -1.98
RSM28	YDR494W	RTN1	Q04947	295 aa	Known RBP	2.68	□□□□□ -1.98
RSM28	YDR494W	NSE1	Q07913	336 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	SMC5	Q08204	1093 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	CUE5	Q08412	411 aa	Known RBP	2.68	□□□□□ -1.98
RSM28	YDR494W	SMF3	Q12078	473 aa	Predicted RBP	2.68	□□□□□ -1.98
RSM28	YDR494W	POM152	P39685	1337 aa		2.68	□□□□□ -1.98
RSM28	YDR494W	PIS1	P06197	220 aa	Known RBP	2.67	□□□□□ -1.98
RSM28	YDR494W	PCL1	P24867	279 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
RSM28	YDR494W	UTH1	P36135	365 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	QDR3	P38227	689 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	RTC2	P38279	296 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	MIG3	P39943	394 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	LCB2	P40970	561 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	MST27	P53176	234 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	YGR117C	P53270	476 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	VPS9	P54787	451 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	PRM6	Q04705	352 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	LOT6	Q07923	191 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	RPN5	Q12250	445 aa	Known RBP	2.67	□□□□□ -1.98
RSM28	YDR494W	FAB1	P34756	2278 aa		2.67	□□□□□ -1.98
RSM28	YDR494W	OPI3	P05375	206 aa		2.66	□□□□□ -1.98
RSM28	YDR494W	RPB5	P20434	215 aa		2.66	□□□□□ -1.98
RSM28	YDR494W	AAT2	P23542	418 aa	Known RBP	2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms