RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C GFD1Q04839 188 aaKnown RBP4.36□□□□□ -1.71
SPR28YDR218C VIK1Q12045 647 aa4.36□□□□□ -1.71
SPR28YDR218C RPL27AP0C2H6 136 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C RPL27BP0C2H7 136 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C ZRC1P20107 442 aa4.35□□□□□ -1.71
SPR28YDR218C GPI12P23797 304 aa4.35□□□□□ -1.71
SPR28YDR218C ELO2P25358 347 aa4.35□□□□□ -1.71
SPR28YDR218C PBN1P25580 416 aa4.35□□□□□ -1.71
SPR28YDR218C DEG1P31115 442 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C MSS51P32335 436 aa4.35□□□□□ -1.71
SPR28YDR218C RGT1P32862 1170 aa4.35□□□□□ -1.71
SPR28YDR218C RPC34P32910 317 aa4.35□□□□□ -1.71
SPR28YDR218C GDH2P33327 1092 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C YHR122WP38829 231 aa4.35□□□□□ -1.71
SPR28YDR218C EGD2P38879 174 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C YER079WP40052 210 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C HXT9P40885 567 aa4.35□□□□□ -1.71
SPR28YDR218C POP1P41812 875 aa4.35□□□□□ -1.71
SPR28YDR218C ABM1P47146 123 aa4.35□□□□□ -1.71
SPR28YDR218C STE24P47154 453 aa4.35□□□□□ -1.71
SPR28YDR218C BIO3P50277 480 aa4.35□□□□□ -1.71
SPR28YDR218C DUG3P53871 357 aa4.35□□□□□ -1.71
SPR28YDR218C HXT11P54862 567 aa4.35□□□□□ -1.71
SPR28YDR218C RPS15Q01855 142 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C ENT5Q03769 411 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C TRS23Q03784 219 aa4.35□□□□□ -1.71
SPR28YDR218C PLM2Q04383 521 aa4.35□□□□□ -1.71
SPR28YDR218C MYO5Q04439 1219 aaKnown RBP4.35□□□□□ -1.71
SPR28YDR218C GMC2Q06201 188 aa4.35□□□□□ -1.71
SPR28YDR218C GGA1Q06336 557 aa4.35□□□□□ -1.71
SPR28YDR218C ATG31Q12421 196 aa4.35□□□□□ -1.71
SPR28YDR218C AI5_BETAQ9ZZX0 354 aa4.35□□□□□ -1.71
SPR28YDR218C MRP1P10662 321 aaKnown RBP4.34□□□□□ -1.71
SPR28YDR218C ATP10P18496 279 aa4.34□□□□□ -1.71
SPR28YDR218C SOR1P35497 357 aaKnown RBP4.34□□□□□ -1.71
SPR28YDR218C GMH1P36125 273 aa4.34□□□□□ -1.71
SPR28YDR218C BNA4P38169 460 aa4.34□□□□□ -1.71
SPR28YDR218C RTT107P38850 1070 aa4.34□□□□□ -1.71
SPR28YDR218C FET3P38993 636 aa4.34□□□□□ -1.71
SPR28YDR218C TFG2P41896 400 aaPredicted RBP4.34□□□□□ -1.71
SPR28YDR218C YRB1P41920 201 aaKnown RBP4.34□□□□□ -1.71
SPR28YDR218C YGR168CP53293 376 aa4.34□□□□□ -1.71
SPR28YDR218C CUS2P53830 285 aaPredicted RBP4.34□□□□□ -1.71
SPR28YDR218C ATG4P53867 494 aa4.34□□□□□ -1.71
SPR28YDR218C PFA5Q03289 374 aa4.34□□□□□ -1.71
SPR28YDR218C GIM5Q04493 163 aa4.34□□□□□ -1.71
SPR28YDR218C ADH6Q04894 360 aaKnown RBP4.34□□□□□ -1.71
SPR28YDR218C FUS2Q05670 677 aa4.34□□□□□ -1.71
SPR28YDR218C PIG1Q06216 648 aa4.34□□□□□ -1.71
SPR28YDR218C SOR2Q07786 357 aa4.34□□□□□ -1.71
SPR28YDR218C RAX1Q08760 435 aa4.34□□□□□ -1.71
SPR28YDR218C USV1Q12132 391 aa4.34□□□□□ -1.71
SPR28YDR218C YRA1Q12159 226 aaKnown RBP4.34□□□□□ -1.71
SPR28YDR218C RKI1Q12189 258 aa4.34□□□□□ -1.71
SPR28YDR218C LCB4Q12246 624 aa4.34□□□□□ -1.71
SPR28YDR218C PRP46Q12417 451 aaPredicted RBP4.34□□□□□ -1.71
SPR28YDR218C RRP12Q12754 1228 aaKnown RBP4.34□□□□□ -1.71
SPR28YDR218C UBA3Q99344 299 aa4.34□□□□□ -1.71
SPR28YDR218C FSH3Q99369 266 aa4.34□□□□□ -1.71
SPR28YDR218C RAD9P14737 1309 aa4.33□□□□□ -1.72
SPR28YDR218C COX3P00420 269 aa4.33□□□□□ -1.72
SPR28YDR218C GDH1P07262 454 aaKnown RBP4.33□□□□□ -1.72
SPR28YDR218C DST1P07273 309 aa4.33□□□□□ -1.72
SPR28YDR218C MRP2P10663 115 aaPredicted RBP4.33□□□□□ -1.72
SPR28YDR218C SEC63P14906 663 aa4.33□□□□□ -1.72
SPR28YDR218C KRS1P15180 591 aaKnown RBP4.33□□□□□ -1.72
SPR28YDR218C POL30P15873 258 aaKnown RBP4.33□□□□□ -1.72
SPR28YDR218C DAL82P21705 255 aa4.33□□□□□ -1.72
SPR28YDR218C RAD57P25301 460 aa4.33□□□□□ -1.72
SPR28YDR218C MRPL9P31334 269 aa4.33□□□□□ -1.72
SPR28YDR218C GDA1P32621 518 aa4.33□□□□□ -1.72
SPR28YDR218C MRPL10P36520 322 aa4.33□□□□□ -1.72
SPR28YDR218C ANS1P38832 159 aa4.33□□□□□ -1.72
SPR28YDR218C GLG2P47011 380 aa4.33□□□□□ -1.72
SPR28YDR218C YJR011CP47086 261 aaPredicted RBP4.33□□□□□ -1.72
SPR28YDR218C LSG1P53145 640 aaKnown RBP4.33□□□□□ -1.72
SPR28YDR218C YGR151CP53287 111 aa4.33□□□□□ -1.72
SPR28YDR218C RTC4P53850 401 aa4.33□□□□□ -1.72
SPR28YDR218C SLG1P54867 378 aa4.33□□□□□ -1.72
SPR28YDR218C RPM2Q02773 1202 aa4.33□□□□□ -1.72
SPR28YDR218C GIP3Q03016 1276 aa4.33□□□□□ -1.72
SPR28YDR218C MSC1Q03104 513 aa4.33□□□□□ -1.72
SPR28YDR218C MDM30Q05930 598 aa4.33□□□□□ -1.72
SPR28YDR218C VPS74Q06385 345 aa4.33□□□□□ -1.72
SPR28YDR218C YLR049CQ12110 428 aa4.33□□□□□ -1.72
SPR28YDR218C ICT1Q12385 394 aa4.33□□□□□ -1.72
SPR28YDR218C RRI1Q12468 440 aa4.33□□□□□ -1.72
SPR28YDR218C MATALPHA1P0CY06 175 aa4.32□□□□□ -1.72
SPR28YDR218C HMLALPHA1P0CY07 175 aa4.32□□□□□ -1.72
SPR28YDR218C MATALPHA2P0CY08 210 aa4.32□□□□□ -1.72
SPR28YDR218C HMLALPHA2P0CY09 210 aa4.32□□□□□ -1.72
SPR28YDR218C CLN3P13365 580 aa4.32□□□□□ -1.72
SPR28YDR218C YAK1P14680 807 aa4.32□□□□□ -1.72
SPR28YDR218C STE18P18852 110 aa4.32□□□□□ -1.72
SPR28YDR218C PMA2P19657 947 aa4.32□□□□□ -1.72
SPR28YDR218C PUT3P25502 979 aaPredicted RBP4.32□□□□□ -1.72
SPR28YDR218C ATP7P30902 174 aa4.32□□□□□ -1.72
SPR28YDR218C VMA5P31412 392 aaKnown RBP4.32□□□□□ -1.72
SPR28YDR218C PTR2P32901 601 aa4.32□□□□□ -1.72
SPR28YDR218C MNS1P32906 549 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms