RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP42	YDR171W	ATX2	Q12067	313 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	YLR112W	Q12130	139 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	NSL1	Q12143	216 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	NBP2	Q12163	236 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
HSP42	YDR171W	HSP42	Q12329	375 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	ICT1	Q12385	394 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	GRX6	Q12438	231 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	ENT1	Q12518	454 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	MED11	Q99278	115 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	STE2	D6VTK4	431 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	ATP6	P00854	259 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	TPK3	P05986	398 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	RHO1	P06780	209 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	BCY1	P07278	416 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	RPL42A	P0CX27	106 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	RPL42B	P0CX28	106 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	SLY1	P22213	666 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	STE50	P25344	346 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	PHA2	P32452	334 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	VMA8	P32610	256 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	CYM1	P32898	989 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	ASK1	P35734	292 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	PHO89	P38361	574 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	YEL068C	P39977	110 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	THO1	P40040	218 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	SLZ1	P40167	298 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	JLP2	P40206	208 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	HPM1	P40481	377 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	HAM1	P47119	197 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	ARO8	P53090	500 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	GPI1	P53306	609 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	CUS2	P53830	285 aa	Predicted RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	CWC25	P53854	179 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	INN1	P53901	409 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	SVL3	Q03088	825 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	HSP31	Q04432	237 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	MRPL1	Q04599	285 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	SWF1	Q04629	336 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	RRP9	Q06506	573 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	YLR031W	Q07978	186 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	MUM3	Q08750	479 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	VPS54	Q12071	889 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	SPE3	Q12074	293 aa	Known RBP	4.03	□□□□□ -1.76
HSP42	YDR171W	ATG29	Q12092	213 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	TY3A-G	Q12173	290 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	LDB17	Q12342	491 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	RGS2	Q99188	309 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	TY3A-I	Q99219	290 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	BI3	Q9ZZW7	517 aa		4.03	□□□□□ -1.76
HSP42	YDR171W	YPT1	P01123	206 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	CBP2	P03874	630 aa	Predicted RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	HXK2	P04807	486 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	PDE2	P06776	526 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	NFT1	P0CE68	1218 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
HSP42	YDR171W	KGD1	P20967	1014 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	TRX1	P22217	103 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	CTR86	P25355	563 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	RIM1	P32445	135 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	AEP1	P32493	518 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	SSO1	P32867	290 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	UTP30	P36144	274 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	PIM1	P36775	1133 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	NAT2	P37293	288 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	FMP23	P38231	175 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	OTU2	P38747	307 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	ATG7	P38862	630 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	EGD2	P38879	174 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	CYC2	P38909	366 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	FLC2	P39719	783 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	MTW1	P39731	289 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	VRG4	P40107	337 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	YJL070C	P40361	888 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	FAR7	P43592	221 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	IRC6	P43615	237 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	SIP4	P46954	829 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	SNX4	P47057	423 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	CPR7	P47103	393 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	RPS7B	P48164	190 aa	Known RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	AZR1	P50080	613 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	MND1	P53102	219 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	BSC5	P53755	489 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	ARK1	P53974	638 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	IZH1	Q03419	316 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	RSN1	Q03516	953 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	YMR209C	Q03648	457 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	SKM1	Q12469	655 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	DCP1	Q12517	231 aa	Predicted RBP	4.02	□□□□□ -1.77
HSP42	YDR171W	AI5_BETA	Q9ZZX0	354 aa		4.02	□□□□□ -1.77
HSP42	YDR171W	MET17	P06106	444 aa		4.01	□□□□□ -1.77
HSP42	YDR171W	RHO2	P06781	192 aa		4.01	□□□□□ -1.77
HSP42	YDR171W	CDC42	P19073	191 aa		4.01	□□□□□ -1.77
HSP42	YDR171W	RVS161	P25343	265 aa	Known RBP	4.01	□□□□□ -1.77
HSP42	YDR171W	PEX3	P28795	441 aa		4.01	□□□□□ -1.77
HSP42	YDR171W	URA10	P30402	227 aa		4.01	□□□□□ -1.77
HSP42	YDR171W	SAC1	P32368	623 aa	Known RBP	4.01	□□□□□ -1.77
HSP42	YDR171W	APE2	P32454	952 aa	Known RBP	4.01	□□□□□ -1.77
HSP42	YDR171W	HXT3	P32466	567 aa	Known RBP	4.01	□□□□□ -1.77
HSP42	YDR171W	KDX1	P36005	433 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms