RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C DCI1Q08558 271 aa3.1□□□□□ -1.91
RUB1YDR139C UAF30Q08747 228 aa3.1□□□□□ -1.91
RUB1YDR139C CDC21P06785 304 aa3.09□□□□□ -1.91
RUB1YDR139C DST1P07273 309 aa3.09□□□□□ -1.91
RUB1YDR139C MRPL10P36520 322 aa3.09□□□□□ -1.91
RUB1YDR139C FAD1P38913 306 aa3.09□□□□□ -1.91
RUB1YDR139C SIM1P40472 476 aa3.09□□□□□ -1.91
RUB1YDR139C PIB2P53191 635 aa3.09□□□□□ -1.91
RUB1YDR139C MDM36Q06820 579 aa3.09□□□□□ -1.91
RUB1YDR139C NCA2Q12374 616 aa3.09□□□□□ -1.91
RUB1YDR139C PHA2P32452 334 aa3.08□□□□□ -1.92
RUB1YDR139C CSE2P33308 149 aa3.08□□□□□ -1.92
RUB1YDR139C INM1P38710 295 aa3.08□□□□□ -1.92
RUB1YDR139C MMF1P40185 145 aaKnown RBP3.08□□□□□ -1.92
RUB1YDR139C TOS3P43637 560 aa3.08□□□□□ -1.92
RUB1YDR139C YJR085CP47131 105 aaKnown RBP3.08□□□□□ -1.92
RUB1YDR139C TIS11P47977 285 aa3.08□□□□□ -1.92
RUB1YDR139C MRM2P53123 320 aa3.08□□□□□ -1.92
RUB1YDR139C YDR341CQ05506 607 aaKnown RBP3.08□□□□□ -1.92
RUB1YDR139C GPM3Q12326 303 aa3.08□□□□□ -1.92
RUB1YDR139C PDE2P06776 526 aa3.07□□□□□ -1.92
RUB1YDR139C ALG1P16661 449 aa3.07□□□□□ -1.92
RUB1YDR139C EXG1P23776 448 aaKnown RBP3.07□□□□□ -1.92
RUB1YDR139C HXT1P32465 570 aa3.07□□□□□ -1.92
RUB1YDR139C AIM10P39965 576 aaKnown RBP3.07□□□□□ -1.92
RUB1YDR139C CHS6P40955 746 aa3.07□□□□□ -1.92
RUB1YDR139C ALF1P53904 254 aa3.07□□□□□ -1.92
RUB1YDR139C ADA2Q02336 434 aa3.07□□□□□ -1.92
RUB1YDR139C GYL1Q04322 720 aa3.07□□□□□ -1.92
RUB1YDR139C NSE1Q07913 336 aa3.07□□□□□ -1.92
RUB1YDR139C JID1Q12350 301 aa3.07□□□□□ -1.92
RUB1YDR139C ATP1P07251 545 aaKnown RBP3.06□□□□□ -1.92
RUB1YDR139C CAP2P13517 287 aa3.06□□□□□ -1.92
RUB1YDR139C MSI1P13712 422 aa3.06□□□□□ -1.92
RUB1YDR139C COX13P32799 129 aa3.06□□□□□ -1.92
RUB1YDR139C SKN1P33336 771 aa3.06□□□□□ -1.92
RUB1YDR139C STP2P38704 541 aa3.06□□□□□ -1.92
RUB1YDR139C GAB1P41733 394 aa3.06□□□□□ -1.92
RUB1YDR139C PLP2Q12017 286 aa3.06□□□□□ -1.92
RUB1YDR139C YGK3Q12222 375 aaPredicted RBP3.06□□□□□ -1.92
RUB1YDR139C IZH2Q12442 317 aa3.06□□□□□ -1.92
RUB1YDR139C RPB5P20434 215 aa3.05□□□□□ -1.92
RUB1YDR139C PHO91P27514 894 aa3.05□□□□□ -1.92
RUB1YDR139C NUP2P32499 720 aa3.05□□□□□ -1.92
RUB1YDR139C YHR131CP38835 850 aa3.05□□□□□ -1.92
RUB1YDR139C GPI16P38875 610 aa3.05□□□□□ -1.92
RUB1YDR139C MAM33P40513 266 aa3.05□□□□□ -1.92
RUB1YDR139C YFR057WP43625 151 aa3.05□□□□□ -1.92
RUB1YDR139C RRP46P53256 223 aaPredicted RBP3.05□□□□□ -1.92
RUB1YDR139C VPS9P54787 451 aa3.05□□□□□ -1.92
RUB1YDR139C RIF2Q06208 395 aa3.05□□□□□ -1.92
RUB1YDR139C LOT6Q07923 191 aa3.05□□□□□ -1.92
RUB1YDR139C SMC5Q08204 1093 aa3.05□□□□□ -1.92
RUB1YDR139C CUE5Q08412 411 aaKnown RBP3.05□□□□□ -1.92
RUB1YDR139C SPE3Q12074 293 aaKnown RBP3.05□□□□□ -1.92
RUB1YDR139C SMF3Q12078 473 aaPredicted RBP3.05□□□□□ -1.92
RUB1YDR139C EAF3Q12432 401 aa3.05□□□□□ -1.92
RUB1YDR139C ERP4Q12450 207 aa3.05□□□□□ -1.92
RUB1YDR139C POM152P39685 1337 aa3.04□□□□□ -1.92
RUB1YDR139C DPH5P32469 300 aaPredicted RBP3.04□□□□□ -1.92
RUB1YDR139C YEF1P32622 495 aa3.04□□□□□ -1.92
RUB1YDR139C NRP1P32770 719 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
RUB1YDR139C PRS1P32895 427 aaKnown RBP3.04□□□□□ -1.92
RUB1YDR139C YKL097CP34245 136 aa3.04□□□□□ -1.92
RUB1YDR139C UTP18P40362 594 aaPredicted RBP3.04□□□□□ -1.92
RUB1YDR139C LCB3P47013 409 aa3.04□□□□□ -1.92
RUB1YDR139C YJL055WP47044 245 aa3.04□□□□□ -1.92
RUB1YDR139C YMR102CQ03177 834 aa3.04□□□□□ -1.92
RUB1YDR139C SXM1Q04175 944 aaKnown RBP3.04□□□□□ -1.92
RUB1YDR139C PRM6Q04705 352 aa3.04□□□□□ -1.92
RUB1YDR139C RTN1Q04947 295 aaKnown RBP3.04□□□□□ -1.92
RUB1YDR139C PAB1P04147 577 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92 RIP-Chip
RUB1YDR139C PIS1P06197 220 aaKnown RBP3.03□□□□□ -1.92
RUB1YDR139C SLM5P25345 492 aaKnown RBP3.03□□□□□ -1.92
RUB1YDR139C PRR1P28708 518 aa3.03□□□□□ -1.92
RUB1YDR139C QDR3P38227 689 aa3.03□□□□□ -1.92
RUB1YDR139C LCB2P40970 561 aa3.03□□□□□ -1.92
RUB1YDR139C HAC1P41546 238 aa3.03□□□□□ -1.92
RUB1YDR139C AIM24P47127 394 aa3.03□□□□□ -1.92
RUB1YDR139C BIR1P47134 954 aa3.03□□□□□ -1.92
RUB1YDR139C ROG1P53118 685 aa3.03□□□□□ -1.92
RUB1YDR139C MST27P53176 234 aa3.03□□□□□ -1.92
RUB1YDR139C YGR117CP53270 476 aa3.03□□□□□ -1.92
RUB1YDR139C HAL1Q01766 294 aa3.03□□□□□ -1.92
RUB1YDR139C YDR541CQ03049 344 aa3.03□□□□□ -1.92
RUB1YDR139C PRP3Q03338 469 aaPredicted RBP3.03□□□□□ -1.92
RUB1YDR139C NDL1Q06568 189 aa3.03□□□□□ -1.92
RUB1YDR139C CMS1Q07897 291 aaKnown RBP3.03□□□□□ -1.92
RUB1YDR139C RPN5Q12250 445 aaKnown RBP3.03□□□□□ -1.92
RUB1YDR139C AHC1Q12433 566 aa3.03□□□□□ -1.92
RUB1YDR139C AAT2P23542 418 aaKnown RBP3.02□□□□□ -1.93
RUB1YDR139C PCL1P24867 279 aa3.02□□□□□ -1.93
RUB1YDR139C SKT5P34226 696 aa3.02□□□□□ -1.93
RUB1YDR139C PEX5P35056 612 aa3.02□□□□□ -1.93
RUB1YDR139C RTC2P38279 296 aa3.02□□□□□ -1.93
RUB1YDR139C YHK8P38776 514 aa3.02□□□□□ -1.93
RUB1YDR139C LRP1P38801 184 aaKnown RBP3.02□□□□□ -1.93
RUB1YDR139C MIG3P39943 394 aa3.02□□□□□ -1.93
RUB1YDR139C DFG10P40526 253 aa3.02□□□□□ -1.93
RUB1YDR139C PAC11P40960 533 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms