RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C PRM1P53835 661 aa3.69□□□□□ -1.82
SHU2YDR078C IBD2P53892 351 aa3.69□□□□□ -1.82
SHU2YDR078C PRO2P54885 456 aaKnown RBP3.69□□□□□ -1.82
SHU2YDR078C YMR181CQ03231 154 aa3.69□□□□□ -1.82
SHU2YDR078C RRB1Q04225 511 aaKnown RBP3.69□□□□□ -1.82
SHU2YDR078C TPT1Q12272 230 aaKnown RBP3.69□□□□□ -1.82
SHU2YDR078C RRP12Q12754 1228 aaKnown RBP3.69□□□□□ -1.82
SHU2YDR078C SUR1P33300 382 aa3.68□□□□□ -1.82
SHU2YDR078C SRB2P34162 210 aa3.68□□□□□ -1.82
SHU2YDR078C YKL097CP34245 136 aa3.68□□□□□ -1.82
SHU2YDR078C SPT10P35208 640 aa3.68□□□□□ -1.82
SHU2YDR078C RIB5P38145 238 aa3.68□□□□□ -1.82
SHU2YDR078C MIX23P38162 196 aa3.68□□□□□ -1.82
SHU2YDR078C MDM31P38880 579 aa3.68□□□□□ -1.82
SHU2YDR078C FAA2P39518 744 aa3.68□□□□□ -1.82
SHU2YDR078C SFH5P47008 294 aa3.68□□□□□ -1.82
SHU2YDR078C YDL186WP48568 277 aa3.68□□□□□ -1.82
SHU2YDR078C PEX27Q08580 376 aa3.68□□□□□ -1.82
SHU2YDR078C RTC5Q12108 567 aaKnown RBP3.68□□□□□ -1.82
SHU2YDR078C NCA2Q12374 616 aa3.68□□□□□ -1.82
SHU2YDR078C ARF1P11076 181 aaKnown RBP3.67□□□□□ -1.82
SHU2YDR078C SAG1P20840 650 aa3.67□□□□□ -1.82
SHU2YDR078C MCK1P21965 375 aaKnown RBP3.67□□□□□ -1.82
SHU2YDR078C SLY1P22213 666 aa3.67□□□□□ -1.82
SHU2YDR078C SPS22P25380 463 aa3.67□□□□□ -1.82
SHU2YDR078C COX13P32799 129 aa3.67□□□□□ -1.82
SHU2YDR078C DOA1P36037 715 aa3.67□□□□□ -1.82
SHU2YDR078C NAT2P37293 288 aa3.67□□□□□ -1.82
SHU2YDR078C YBR137WP38276 179 aa3.67□□□□□ -1.82
SHU2YDR078C YBP1P38315 674 aa3.67□□□□□ -1.82
SHU2YDR078C RRF1P38771 230 aa3.67□□□□□ -1.82
SHU2YDR078C ATM1P40416 690 aa3.67□□□□□ -1.82
SHU2YDR078C MKT1P40850 830 aaKnown RBP3.67□□□□□ -1.82
SHU2YDR078C YJL213WP40896 331 aa3.67□□□□□ -1.82
SHU2YDR078C TOS3P43637 560 aa3.67□□□□□ -1.82
SHU2YDR078C TOS2P50078 622 aa3.67□□□□□ -1.82
SHU2YDR078C SMA2Q04658 369 aa3.67□□□□□ -1.82
SHU2YDR078C BCH1Q05029 724 aa3.67□□□□□ -1.82
SHU2YDR078C YPR078CQ06813 372 aa3.67□□□□□ -1.82
SHU2YDR078C HIF1Q12373 385 aa3.67□□□□□ -1.82
SHU2YDR078C CEX1Q12453 761 aa3.67□□□□□ -1.82
SHU2YDR078C ATP1P07251 545 aaKnown RBP3.66□□□□□ -1.82
SHU2YDR078C THR4P16120 514 aaKnown RBP3.66□□□□□ -1.82
SHU2YDR078C TOA2P32774 122 aa3.66□□□□□ -1.82
SHU2YDR078C SKT5P34226 696 aa3.66□□□□□ -1.82
SHU2YDR078C PTK1P36002 662 aaPredicted RBP3.66□□□□□ -1.82
SHU2YDR078C OST1P41543 476 aaKnown RBP3.66□□□□□ -1.82
SHU2YDR078C GPI8P49018 411 aa3.66□□□□□ -1.82
SHU2YDR078C YGR117CP53270 476 aa3.66□□□□□ -1.82
SHU2YDR078C MSO1P53604 210 aaKnown RBP3.66□□□□□ -1.82
SHU2YDR078C HST1P53685 503 aa3.66□□□□□ -1.82
SHU2YDR078C WSC2P53832 503 aa3.66□□□□□ -1.82
SHU2YDR078C CRZ1P53968 678 aa3.66□□□□□ -1.82
SHU2YDR078C HXT11P54862 567 aa3.66□□□□□ -1.82
SHU2YDR078C ASA1Q06822 443 aa3.66□□□□□ -1.82
SHU2YDR078C LDS2Q08218 356 aa3.66□□□□□ -1.82
SHU2YDR078C RAX1Q08760 435 aa3.66□□□□□ -1.82
SHU2YDR078C SNX3Q08826 162 aaKnown RBP3.66□□□□□ -1.82
SHU2YDR078C THP3Q12049 470 aaKnown RBP3.66□□□□□ -1.82
SHU2YDR078C RNA1P11745 407 aaKnown RBP3.65□□□□□ -1.83
SHU2YDR078C CPR1P14832 162 aaKnown RBP3.65□□□□□ -1.83
SHU2YDR078C YCL068CP25593 260 aa3.65□□□□□ -1.83
SHU2YDR078C MRP4P32902 394 aa3.65□□□□□ -1.83
SHU2YDR078C RET3P53600 189 aa3.65□□□□□ -1.83
SHU2YDR078C YOR012WQ12351 137 aa3.65□□□□□ -1.83
SHU2YDR078C PAB1P04147 577 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83 RIP-Chip
SHU2YDR078C TPK3P05986 398 aa3.64□□□□□ -1.83
SHU2YDR078C GDH1P07262 454 aaKnown RBP3.64□□□□□ -1.83
SHU2YDR078C MAS1P10507 462 aa3.64□□□□□ -1.83
SHU2YDR078C MSK1P32048 576 aa3.64□□□□□ -1.83
SHU2YDR078C PRO3P32263 286 aaKnown RBP3.64□□□□□ -1.83
SHU2YDR078C HMX1P32339 317 aa3.64□□□□□ -1.83
SHU2YDR078C YEF1P32622 495 aa3.64□□□□□ -1.83
SHU2YDR078C PCH2P38126 564 aa3.64□□□□□ -1.83
SHU2YDR078C CHK1P38147 527 aa3.64□□□□□ -1.83
SHU2YDR078C MTC6P38849 526 aa3.64□□□□□ -1.83
SHU2YDR078C LIN1P38852 340 aaPredicted RBP3.64□□□□□ -1.83
SHU2YDR078C YDR089WP38966 869 aa3.64□□□□□ -1.83
SHU2YDR078C JLP2P40206 208 aa3.64□□□□□ -1.83
SHU2YDR078C OSW5P40219 148 aa3.64□□□□□ -1.83
SHU2YDR078C IDP2P41939 412 aa3.64□□□□□ -1.83
SHU2YDR078C RRN9P53437 365 aa3.64□□□□□ -1.83
SHU2YDR078C GOR1P53839 350 aa3.64□□□□□ -1.83
SHU2YDR078C YMR310CQ04867 317 aaPredicted RBP3.64□□□□□ -1.83
SHU2YDR078C PPT2Q12036 173 aa3.64□□□□□ -1.83
SHU2YDR078C YOP1Q12402 180 aa3.64□□□□□ -1.83
SHU2YDR078C CAP2P13517 287 aa3.63□□□□□ -1.83
SHU2YDR078C DAL5P15365 543 aa3.63□□□□□ -1.83
SHU2YDR078C HEM15P16622 393 aa3.63□□□□□ -1.83
SHU2YDR078C DBR1P24309 405 aaKnown RBP3.63□□□□□ -1.83
SHU2YDR078C AGA1P32323 725 aa3.63□□□□□ -1.83
SHU2YDR078C MUD1P32605 298 aaKnown RBP3.63□□□□□ -1.83
SHU2YDR078C LCP5P40079 357 aaPredicted RBP3.63□□□□□ -1.83
SHU2YDR078C SNL1P40548 159 aa3.63□□□□□ -1.83
SHU2YDR078C SPG5P42933 373 aa3.63□□□□□ -1.83
SHU2YDR078C SPR6Q01684 191 aa3.63□□□□□ -1.83
SHU2YDR078C CCE1Q03702 353 aa3.63□□□□□ -1.83
SHU2YDR078C YMR317WQ04893 1140 aa3.63□□□□□ -1.83
SHU2YDR078C MDY2Q12285 212 aa3.63□□□□□ -1.83
SHU2YDR078C AIM45Q12480 344 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms