RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C YDR341CQ05506 607 aaKnown RBP3.71□□□□□ -1.81
RRI1YDL216C YLR456WQ06199 204 aa3.71□□□□□ -1.81
RRI1YDL216C MDM36Q06820 579 aa3.71□□□□□ -1.81
RRI1YDL216C UAF30Q08747 228 aa3.71□□□□□ -1.81
RRI1YDL216C NCA2Q12374 616 aa3.71□□□□□ -1.81
RRI1YDL216C CDC21P06785 304 aa3.7□□□□□ -1.82
RRI1YDL216C PHA2P32452 334 aa3.7□□□□□ -1.82
RRI1YDL216C SBE22P38814 852 aa3.7□□□□□ -1.82
RRI1YDL216C TOS3P43637 560 aa3.7□□□□□ -1.82
RRI1YDL216C PIB2P53191 635 aa3.7□□□□□ -1.82
RRI1YDL216C JID1Q12350 301 aa3.7□□□□□ -1.82
RRI1YDL216C HXT1P32465 570 aa3.7□□□□□ -1.82
RRI1YDL216C CSE2P33308 149 aa3.7□□□□□ -1.82
RRI1YDL216C MRPL10P36520 322 aa3.7□□□□□ -1.82
RRI1YDL216C FAD1P38913 306 aa3.7□□□□□ -1.82
RRI1YDL216C SIM1P40472 476 aa3.7□□□□□ -1.82
RRI1YDL216C ALF1P53904 254 aa3.7□□□□□ -1.82
RRI1YDL216C VPS9P54787 451 aa3.7□□□□□ -1.82
RRI1YDL216C GPM3Q12326 303 aa3.7□□□□□ -1.82
RRI1YDL216C INM1P38710 295 aa3.69□□□□□ -1.82
RRI1YDL216C MMF1P40185 145 aaKnown RBP3.69□□□□□ -1.82
RRI1YDL216C YJR085CP47131 105 aaKnown RBP3.69□□□□□ -1.82
RRI1YDL216C MRM2P53123 320 aa3.69□□□□□ -1.82
RRI1YDL216C ADA2Q02336 434 aa3.69□□□□□ -1.82
RRI1YDL216C NSE1Q07913 336 aa3.69□□□□□ -1.82
RRI1YDL216C LOT6Q07923 191 aa3.69□□□□□ -1.82
RRI1YDL216C PLP2Q12017 286 aa3.69□□□□□ -1.82
RRI1YDL216C YGK3Q12222 375 aaPredicted RBP3.69□□□□□ -1.82
RRI1YDL216C IZH2Q12442 317 aa3.69□□□□□ -1.82
RRI1YDL216C PDE2P06776 526 aa3.68□□□□□ -1.82
RRI1YDL216C ATP1P07251 545 aaKnown RBP3.68□□□□□ -1.82
RRI1YDL216C CAP2P13517 287 aa3.68□□□□□ -1.82
RRI1YDL216C ALG1P16661 449 aa3.68□□□□□ -1.82
RRI1YDL216C RPB5P20434 215 aa3.68□□□□□ -1.82
RRI1YDL216C EXG1P23776 448 aaKnown RBP3.68□□□□□ -1.82
RRI1YDL216C SKN1P33336 771 aa3.68□□□□□ -1.82
RRI1YDL216C AIM10P39965 576 aaKnown RBP3.68□□□□□ -1.82
RRI1YDL216C MAM33P40513 266 aa3.68□□□□□ -1.82
RRI1YDL216C GAB1P41733 394 aa3.68□□□□□ -1.82
RRI1YDL216C TIS11P47977 285 aa3.68□□□□□ -1.82
RRI1YDL216C RIF2Q06208 395 aa3.68□□□□□ -1.82
RRI1YDL216C CUE5Q08412 411 aaKnown RBP3.68□□□□□ -1.82
RRI1YDL216C MSI1P13712 422 aa3.67□□□□□ -1.82
RRI1YDL216C NUP2P32499 720 aa3.67□□□□□ -1.82
RRI1YDL216C COX13P32799 129 aa3.67□□□□□ -1.82
RRI1YDL216C PRS1P32895 427 aaKnown RBP3.67□□□□□ -1.82
RRI1YDL216C DED81P38707 554 aaKnown RBP3.67□□□□□ -1.82
RRI1YDL216C UTP18P40362 594 aaPredicted RBP3.67□□□□□ -1.82
RRI1YDL216C SXM1Q04175 944 aaKnown RBP3.67□□□□□ -1.82
RRI1YDL216C RTN1Q04947 295 aaKnown RBP3.67□□□□□ -1.82
RRI1YDL216C CMS1Q07897 291 aaKnown RBP3.67□□□□□ -1.82
RRI1YDL216C SMC5Q08204 1093 aa3.67□□□□□ -1.82
RRI1YDL216C POM152P39685 1337 aa3.66□□□□□ -1.82
RRI1YDL216C PRR1P28708 518 aa3.66□□□□□ -1.82
RRI1YDL216C YEF1P32622 495 aa3.66□□□□□ -1.82
RRI1YDL216C CHS6P40955 746 aa3.66□□□□□ -1.82
RRI1YDL216C YFR057WP43625 151 aa3.66□□□□□ -1.82
RRI1YDL216C RRP46P53256 223 aaPredicted RBP3.66□□□□□ -1.82
RRI1YDL216C YMR102CQ03177 834 aa3.66□□□□□ -1.82
RRI1YDL216C GYL1Q04322 720 aa3.66□□□□□ -1.82
RRI1YDL216C PRM6Q04705 352 aa3.66□□□□□ -1.82
RRI1YDL216C SPE3Q12074 293 aaKnown RBP3.66□□□□□ -1.82
RRI1YDL216C EAF3Q12432 401 aa3.66□□□□□ -1.82
RRI1YDL216C PAB1P04147 577 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
RRI1YDL216C PHO91P27514 894 aa3.65□□□□□ -1.83
RRI1YDL216C SKT5P34226 696 aa3.65□□□□□ -1.83
RRI1YDL216C STP2P38704 541 aa3.65□□□□□ -1.83
RRI1YDL216C YHR131CP38835 850 aa3.65□□□□□ -1.83
RRI1YDL216C GPI16P38875 610 aa3.65□□□□□ -1.83
RRI1YDL216C HAC1P41546 238 aa3.65□□□□□ -1.83
RRI1YDL216C AIM24P47127 394 aa3.65□□□□□ -1.83
RRI1YDL216C YGR117CP53270 476 aa3.65□□□□□ -1.83
RRI1YDL216C PRP3Q03338 469 aaPredicted RBP3.65□□□□□ -1.83
RRI1YDL216C NDL1Q06568 189 aa3.65□□□□□ -1.83
RRI1YDL216C ERP4Q12450 207 aa3.65□□□□□ -1.83
RRI1YDL216C PIS1P06197 220 aaKnown RBP3.64□□□□□ -1.83
RRI1YDL216C DPH5P32469 300 aaPredicted RBP3.64□□□□□ -1.83
RRI1YDL216C NRP1P32770 719 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
RRI1YDL216C RTC2P38279 296 aa3.64□□□□□ -1.83
RRI1YDL216C PAC11P40960 533 aa3.64□□□□□ -1.83
RRI1YDL216C LCB3P47013 409 aa3.64□□□□□ -1.83
RRI1YDL216C YJL055WP47044 245 aa3.64□□□□□ -1.83
RRI1YDL216C BIR1P47134 954 aa3.64□□□□□ -1.83
RRI1YDL216C MST27P53176 234 aa3.64□□□□□ -1.83
RRI1YDL216C SPR6Q01684 191 aa3.64□□□□□ -1.83
RRI1YDL216C HAL1Q01766 294 aa3.64□□□□□ -1.83
RRI1YDL216C YDR541CQ03049 344 aa3.64□□□□□ -1.83
RRI1YDL216C BSC6Q08280 497 aa3.64□□□□□ -1.83
RRI1YDL216C SMF3Q12078 473 aaPredicted RBP3.64□□□□□ -1.83
RRI1YDL216C RPN5Q12250 445 aaKnown RBP3.64□□□□□ -1.83
RRI1YDL216C AAT2P23542 418 aaKnown RBP3.63□□□□□ -1.83
RRI1YDL216C SLM5P25345 492 aaKnown RBP3.63□□□□□ -1.83
RRI1YDL216C YKL097CP34245 136 aa3.63□□□□□ -1.83
RRI1YDL216C PEX5P35056 612 aa3.63□□□□□ -1.83
RRI1YDL216C QDR3P38227 689 aa3.63□□□□□ -1.83
RRI1YDL216C LRP1P38801 184 aaKnown RBP3.63□□□□□ -1.83
RRI1YDL216C STE24P47154 453 aa3.63□□□□□ -1.83
RRI1YDL216C ROG1P53118 685 aa3.63□□□□□ -1.83
RRI1YDL216C HTZ1Q12692 134 aaKnown RBP3.63□□□□□ -1.83
RRI1YDL216C SOD1P00445 154 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms