RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C JLP2P40206 208 aa3.52□□□□□ -1.85
RPN4YDL020C PBA1Q05778 276 aa3.52□□□□□ -1.85
RPN4YDL020C ECM7Q06200 448 aa3.52□□□□□ -1.85
RPN4YDL020C YFH1Q07540 174 aa3.52□□□□□ -1.85
RPN4YDL020C NCA2Q12374 616 aa3.52□□□□□ -1.85
RPN4YDL020C OPI3P05375 206 aa3.51□□□□□ -1.85
RPN4YDL020C DAP2P18962 818 aa3.51□□□□□ -1.85
RPN4YDL020C SLM5P25345 492 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C LAS1P36146 502 aaPredicted RBP3.51□□□□□ -1.85
RPN4YDL020C YBR139WP38109 508 aa3.51□□□□□ -1.85
RPN4YDL020C CHK1P38147 527 aa3.51□□□□□ -1.85
RPN4YDL020C KAP104P38217 918 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C TOS3P43637 560 aa3.51□□□□□ -1.85
RPN4YDL020C CCE1Q03702 353 aa3.51□□□□□ -1.85
RPN4YDL020C IPK1Q06667 281 aa3.51□□□□□ -1.85
RPN4YDL020C RAX1Q08760 435 aa3.51□□□□□ -1.85
RPN4YDL020C ERV2Q12284 196 aa3.51□□□□□ -1.85
RPN4YDL020C TFB5Q3E7C1 72 aaPredicted RBP3.51□□□□□ -1.85
RPN4YDL020C SRN2Q99176 213 aa3.51□□□□□ -1.85
RPN4YDL020C TCB3Q03640 1545 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C TRP1P00912 224 aa3.51□□□□□ -1.85
RPN4YDL020C HHF1P02309 103 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C ATP1P07251 545 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C RPL12AP0CX53 165 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C RPL12BP0CX54 165 aa3.51□□□□□ -1.85
RPN4YDL020C SPT15P13393 240 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C YBL059WP34224 193 aa3.51□□□□□ -1.85
RPN4YDL020C ADH5P38113 351 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C NDT80P38830 627 aa3.51□□□□□ -1.85
RPN4YDL020C CAJ1P39101 391 aa3.51□□□□□ -1.85
RPN4YDL020C PMT5P52867 743 aa3.51□□□□□ -1.85
RPN4YDL020C YGR016WP53209 190 aa3.51□□□□□ -1.85
RPN4YDL020C RTT102P53330 157 aa3.51□□□□□ -1.85
RPN4YDL020C ELP3Q02908 557 aaKnown RBP3.51□□□□□ -1.85
RPN4YDL020C PRP3Q03338 469 aaPredicted RBP3.51□□□□□ -1.85
RPN4YDL020C URC2Q04411 772 aa3.51□□□□□ -1.85
RPN4YDL020C YOR387CQ08910 206 aa3.51□□□□□ -1.85
RPN4YDL020C CEX1Q12453 761 aa3.51□□□□□ -1.85
RPN4YDL020C PHO84P25297 587 aaKnown RBP3.5□□□□□ -1.85
RPN4YDL020C DEG1P31115 442 aaKnown RBP3.5□□□□□ -1.85
RPN4YDL020C COX13P32799 129 aa3.5□□□□□ -1.85
RPN4YDL020C RFS1P38234 210 aaKnown RBP3.5□□□□□ -1.85
RPN4YDL020C SPP381P38282 291 aaPredicted RBP3.5□□□□□ -1.85
RPN4YDL020C STE24P47154 453 aa3.5□□□□□ -1.85
RPN4YDL020C MTM1P53320 366 aa3.5□□□□□ -1.85
RPN4YDL020C HER2Q03557 464 aa3.5□□□□□ -1.85
RPN4YDL020C CUE5Q08412 411 aaKnown RBP3.5□□□□□ -1.85
RPN4YDL020C CYC3P06182 269 aa3.49□□□□□ -1.85
RPN4YDL020C CAP2P13517 287 aa3.49□□□□□ -1.85
RPN4YDL020C CBS2P14905 389 aa3.49□□□□□ -1.85
RPN4YDL020C EXG1P23776 448 aaKnown RBP3.49□□□□□ -1.85
RPN4YDL020C POT1P27796 417 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
RPN4YDL020C PAD1P33751 242 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
RPN4YDL020C PTH1P38876 190 aaKnown RBP3.49□□□□□ -1.85
RPN4YDL020C ATM1P40416 690 aa3.49□□□□□ -1.85
RPN4YDL020C TLG2Q08144 397 aa3.49□□□□□ -1.85
RPN4YDL020C AAD15Q08361 143 aa3.49□□□□□ -1.85
RPN4YDL020C YRM1Q12340 786 aa3.49□□□□□ -1.85
RPN4YDL020C ARF1P11076 181 aaKnown RBP3.48□□□□□ -1.85
RPN4YDL020C NAM9P27929 486 aa3.48□□□□□ -1.85
RPN4YDL020C FAA1P30624 700 aaKnown RBP3.48□□□□□ -1.85
RPN4YDL020C DOA1P36037 715 aa3.48□□□□□ -1.85
RPN4YDL020C AVT5P38176 459 aa3.48□□□□□ -1.85
RPN4YDL020C TOS2P50078 622 aa3.48□□□□□ -1.85
RPN4YDL020C YGR117CP53270 476 aa3.48□□□□□ -1.85
RPN4YDL020C SPR6Q01684 191 aa3.48□□□□□ -1.85
RPN4YDL020C YDR286CQ05530 114 aa3.48□□□□□ -1.85
RPN4YDL020C NDE2Q07500 545 aa3.48□□□□□ -1.85
RPN4YDL020C TPK3P05986 398 aa3.47□□□□□ -1.85
RPN4YDL020C PHA2P32452 334 aa3.47□□□□□ -1.85
RPN4YDL020C MNS1P32906 549 aa3.47□□□□□ -1.85
RPN4YDL020C SKT5P34226 696 aa3.47□□□□□ -1.85
RPN4YDL020C SIF2P38262 535 aa3.47□□□□□ -1.85
RPN4YDL020C YHR177WP38867 453 aa3.47□□□□□ -1.85
RPN4YDL020C YPI1P43587 155 aa3.47□□□□□ -1.85
RPN4YDL020C CWC25P53854 179 aaKnown RBP3.47□□□□□ -1.85
RPN4YDL020C ASA1Q06822 443 aa3.47□□□□□ -1.85
RPN4YDL020C NOP6Q07623 225 aaKnown RBP3.47□□□□□ -1.85
RPN4YDL020C POM152P39685 1337 aa3.47□□□□□ -1.85
RPN4YDL020C RPS8AP0CX39 200 aaKnown RBP3.46□□□□□ -1.85
RPN4YDL020C RPS8BP0CX40 200 aaKnown RBP3.46□□□□□ -1.85
RPN4YDL020C SCH9P11792 824 aaKnown RBP3.46□□□□□ -1.85
RPN4YDL020C UBA1P22515 1024 aaKnown RBP3.46□□□□□ -1.85
RPN4YDL020C ARO2P28777 376 aaKnown RBP3.46□□□□□ -1.85
RPN4YDL020C KAR9P32526 644 aa3.46□□□□□ -1.85
RPN4YDL020C YEF1P32622 495 aa3.46□□□□□ -1.85
RPN4YDL020C MSG5P38590 489 aa3.46□□□□□ -1.85
RPN4YDL020C SBE22P38814 852 aa3.46□□□□□ -1.85
RPN4YDL020C COX14P39103 70 aa3.46□□□□□ -1.85
RPN4YDL020C YIL029CP40538 142 aa3.46□□□□□ -1.85
RPN4YDL020C REE1P40893 198 aa3.46□□□□□ -1.85
RPN4YDL020C ATP22P50273 684 aaPredicted RBP3.46□□□□□ -1.85
RPN4YDL020C NUP116Q02630 1113 aa3.46□□□□□ -1.85
RPN4YDL020C DBP9Q06218 594 aaKnown RBP3.46□□□□□ -1.85
RPN4YDL020C PGC1Q08959 321 aa3.46□□□□□ -1.85
RPN4YDL020C PAB1P04147 577 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
RPN4YDL020C SSC1P0CS90 654 aaKnown RBP3.46□□□□□ -1.86
RPN4YDL020C TPM1P17536 199 aaKnown RBP3.46□□□□□ -1.86
RPN4YDL020C DAL2P25335 343 aa3.46□□□□□ -1.86
RPN4YDL020C RRP46P53256 223 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms