RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W PSD1P39006 500 aa1.12□□□□□ -2.23
CDC39YCR093W LYS4P49367 693 aaPredicted RBP1.12□□□□□ -2.23
CDC39YCR093W FRE4P53746 719 aa1.12□□□□□ -2.23
CDC39YCR093W ASI1P54074 624 aa1.12□□□□□ -2.23
CDC39YCR093W SLD5Q03406 294 aa1.12□□□□□ -2.23
CDC39YCR093W GAS2Q06135 555 aa1.12□□□□□ -2.23
CDC39YCR093W ATP10P18496 279 aa1.12□□□□□ -2.23
CDC39YCR093W BUB3P26449 341 aa1.12□□□□□ -2.23
CDC39YCR093W ICL1P28240 557 aaPredicted RBP1.12□□□□□ -2.23
CDC39YCR093W LDS1P31379 325 aa1.12□□□□□ -2.23
CDC39YCR093W SMY1P32364 656 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W TMT1P32643 299 aa1.12□□□□□ -2.23
CDC39YCR093W ARC40P38328 384 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W RFC3P38629 340 aa1.12□□□□□ -2.23
CDC39YCR093W YIL054WP40524 105 aa1.12□□□□□ -2.23
CDC39YCR093W CHS6P40955 746 aa1.12□□□□□ -2.23
CDC39YCR093W NGL3Q03210 505 aa1.12□□□□□ -2.23
CDC39YCR093W ARX1Q03862 593 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W YLR297WQ05899 129 aa1.12□□□□□ -2.23
CDC39YCR093W APC5Q08683 685 aa1.12□□□□□ -2.23
CDC39YCR093W YRF1-3P0CX14 1859 aa1.12□□□□□ -2.23
CDC39YCR093W YRF1-7P0CX15 1859 aa1.12□□□□□ -2.23
CDC39YCR093W GSC2P40989 1895 aa1.12□□□□□ -2.23
CDC39YCR093W YRF1-6P53819 1859 aa1.12□□□□□ -2.23
CDC39YCR093W CPR1P14832 162 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W YSP3P25036 478 aa1.12□□□□□ -2.23
CDC39YCR093W PPZ1P26570 692 aa1.12□□□□□ -2.23
CDC39YCR093W KTI12P34253 313 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W UIP5P36137 443 aa1.12□□□□□ -2.23
CDC39YCR093W CTM1P38818 585 aa1.12□□□□□ -2.23
CDC39YCR093W KEL1P38853 1164 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W SFH5P47008 294 aa1.12□□□□□ -2.23
CDC39YCR093W RSC1P53236 928 aa1.12□□□□□ -2.23
CDC39YCR093W REX2P54964 269 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W ESA1Q08649 445 aa1.12□□□□□ -2.23
CDC39YCR093W YIL177CP40434 1758 aa1.12□□□□□ -2.23
CDC39YCR093W YJL225CP40889 1758 aa1.12□□□□□ -2.23
CDC39YCR093W PEP4P07267 405 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W RIP1P08067 215 aa1.12□□□□□ -2.23
CDC39YCR093W RRP7P25368 297 aaPredicted RBP1.12□□□□□ -2.23
CDC39YCR093W ZIP1P31111 875 aa1.12□□□□□ -2.23
CDC39YCR093W FLO10P36170 1169 aa1.12□□□□□ -2.23
CDC39YCR093W TOS3P43637 560 aa1.12□□□□□ -2.23
CDC39YCR093W PHO86P46956 311 aa1.12□□□□□ -2.23
CDC39YCR093W LOH1P47055 219 aa1.12□□□□□ -2.23
CDC39YCR093W YGL260WP53056 76 aa1.12□□□□□ -2.23
CDC39YCR093W MLC1P53141 149 aa1.12□□□□□ -2.23
CDC39YCR093W ERP1Q05359 219 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W MBR1P23493 339 aa1.12□□□□□ -2.23
CDC39YCR093W URA7P28274 579 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W MRP4P32902 394 aa1.12□□□□□ -2.23
CDC39YCR093W NAT2P37293 288 aa1.12□□□□□ -2.23
CDC39YCR093W MST28P39552 234 aa1.12□□□□□ -2.23
CDC39YCR093W YNL208WP40159 199 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W MDE1P47095 244 aa1.12□□□□□ -2.23
CDC39YCR093W BNA1P47096 177 aa1.12□□□□□ -2.23
CDC39YCR093W ARE2P53629 642 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W YMR102CQ03177 834 aa1.12□□□□□ -2.23
CDC39YCR093W ACL4Q03771 387 aa1.12□□□□□ -2.23
CDC39YCR093W DIC1Q06143 298 aa1.12□□□□□ -2.23
CDC39YCR093W RRP9Q06506 573 aaKnown RBP1.12□□□□□ -2.23
CDC39YCR093W RBD2Q12270 262 aa1.12□□□□□ -2.23
CDC39YCR093W TSC11P40061 1430 aa1.12□□□□□ -2.23
CDC39YCR093W MRP1P10662 321 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W SIN4P32259 974 aa1.11□□□□□ -2.23
CDC39YCR093W MEI5P32489 222 aa1.11□□□□□ -2.23
CDC39YCR093W YEF1P32622 495 aa1.11□□□□□ -2.23
CDC39YCR093W SRO77P38163 1010 aa1.11□□□□□ -2.23
CDC39YCR093W PEX18P38855 283 aa1.11□□□□□ -2.23
CDC39YCR093W GAT2P40209 560 aa1.11□□□□□ -2.23
CDC39YCR093W GWT1P47026 490 aa1.11□□□□□ -2.23
CDC39YCR093W RTT101P47050 842 aa1.11□□□□□ -2.23
CDC39YCR093W PIR3Q03180 325 aa1.11□□□□□ -2.23
CDC39YCR093W YML108WQ03759 105 aa1.11□□□□□ -2.23
CDC39YCR093W THI20Q08224 551 aa1.11□□□□□ -2.23
CDC39YCR093W GPM3Q12326 303 aa1.11□□□□□ -2.23
CDC39YCR093W RRP12Q12754 1228 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W MET8P15807 274 aa1.11□□□□□ -2.23
CDC39YCR093W HEM15P16622 393 aa1.11□□□□□ -2.23
CDC39YCR093W RPB5P20434 215 aa1.11□□□□□ -2.23
CDC39YCR093W RPL16AP26784 199 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W TIP1P27654 210 aaPredicted RBP1.11□□□□□ -2.23
CDC39YCR093W IMD2P38697 523 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W EFM1P38732 585 aa1.11□□□□□ -2.23
CDC39YCR093W LRP1P38801 184 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W YJL213WP40896 331 aa1.11□□□□□ -2.23
CDC39YCR093W IMD3P50095 523 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W HOS2P53096 452 aaPredicted RBP1.11□□□□□ -2.23
CDC39YCR093W VOA1P53262 265 aa1.11□□□□□ -2.23
CDC39YCR093W ESBP6P53918 673 aa1.11□□□□□ -2.23
CDC39YCR093W OAZ1Q02803 292 aa1.11□□□□□ -2.23
CDC39YCR093W YOR365CQ08844 703 aa1.11□□□□□ -2.23
CDC39YCR093W RPN5Q12250 445 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W IZH4Q99393 312 aa1.11□□□□□ -2.23
CDC39YCR093W ILV5P06168 395 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W TAL1P15019 335 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W FUN26P31381 517 aa1.11□□□□□ -2.23
CDC39YCR093W HXT3P32466 567 aaKnown RBP1.11□□□□□ -2.23
CDC39YCR093W TOA1P32773 286 aa1.11□□□□□ -2.23
CDC39YCR093W SPC34P36131 295 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms