RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	YPS5	P53057	165 aa		2.79	□□□□□ -1.96
APM3	YBR288C	AIM32	Q04689	311 aa		2.79	□□□□□ -1.96
APM3	YBR288C	NCA2	Q12374	616 aa		2.79	□□□□□ -1.96
APM3	YBR288C	EAF3	Q12432	401 aa		2.79	□□□□□ -1.96
APM3	YBR288C	NAG1	Q8TGN9	163 aa		2.79	□□□□□ -1.96
APM3	YBR288C	URA4	P20051	364 aa		2.78	□□□□□ -1.96
APM3	YBR288C	ANR2	P36090	516 aa	Predicted RBP	2.78	□□□□□ -1.96
APM3	YBR288C	GPI18	P38211	433 aa		2.78	□□□□□ -1.96
APM3	YBR288C	CHS6	P40955	746 aa		2.78	□□□□□ -1.96
APM3	YBR288C	OCA2	P53949	197 aa		2.78	□□□□□ -1.96
APM3	YBR288C	STD1	Q02794	444 aa		2.78	□□□□□ -1.96
APM3	YBR288C	DON1	Q05610	365 aa		2.78	□□□□□ -1.96
APM3	YBR288C	TSR2	Q06672	205 aa	Known RBP	2.78	□□□□□ -1.96
APM3	YBR288C	ISN1	Q99312	450 aa		2.78	□□□□□ -1.96
APM3	YBR288C	SWR1	Q05471	1514 aa		2.78	□□□□□ -1.96
APM3	YBR288C	BRF1	P29056	596 aa		2.77	□□□□□ -1.97
APM3	YBR288C	GPD2	P41911	440 aa	Known RBP	2.77	□□□□□ -1.97
APM3	YBR288C	FLC3	P53121	802 aa		2.77	□□□□□ -1.97
APM3	YBR288C	KAP120	Q02932	1032 aa		2.77	□□□□□ -1.97
APM3	YBR288C	DCS1	Q06151	350 aa		2.77	□□□□□ -1.97
APM3	YBR288C	MFG1	Q07684	458 aa		2.77	□□□□□ -1.97
APM3	YBR288C	YRF1-4	O13559	1382 aa		2.77	□□□□□ -1.97
APM3	YBR288C	ADE4	P04046	510 aa	Known RBP	2.77	□□□□□ -1.97
APM3	YBR288C	NIP1	P32497	812 aa	Known RBP	2.77	□□□□□ -1.97
APM3	YBR288C	CYS4	P32582	507 aa	Known RBP	2.77	□□□□□ -1.97
APM3	YBR288C	ALD5	P40047	520 aa	Known RBP	2.77	□□□□□ -1.97
APM3	YBR288C	YNL208W	P40159	199 aa	Known RBP	2.77	□□□□□ -1.97
APM3	YBR288C	TOS3	P43637	560 aa		2.77	□□□□□ -1.97
APM3	YBR288C	COS1	P53822	381 aa		2.77	□□□□□ -1.97
APM3	YBR288C	YMR130W	Q04223	302 aa		2.77	□□□□□ -1.97
APM3	YBR288C	YPR091C	Q06833	770 aa		2.77	□□□□□ -1.97
APM3	YBR288C	BUD21	Q08492	214 aa	Predicted RBP	2.77	□□□□□ -1.97
APM3	YBR288C	COX3	P00420	269 aa		2.76	□□□□□ -1.97
APM3	YBR288C	PIS1	P06197	220 aa	Known RBP	2.76	□□□□□ -1.97
APM3	YBR288C	REC107	P21651	314 aa		2.76	□□□□□ -1.97
APM3	YBR288C	YCR051W	P25631	222 aa		2.76	□□□□□ -1.97
APM3	YBR288C	YGL262W	P53054	175 aa		2.76	□□□□□ -1.97
APM3	YBR288C	CLD1	P53264	445 aa		2.76	□□□□□ -1.97
APM3	YBR288C	ALF1	P53904	254 aa		2.76	□□□□□ -1.97
APM3	YBR288C	MMT1	Q03218	510 aa		2.76	□□□□□ -1.97
APM3	YBR288C	YMR155W	Q03795	547 aa		2.76	□□□□□ -1.97
APM3	YBR288C	ROY1	Q04847	553 aa		2.76	□□□□□ -1.97
APM3	YBR288C	LOT6	Q07923	191 aa		2.76	□□□□□ -1.97
APM3	YBR288C	YGR250C	P53316	781 aa	Known RBP	2.75	□□□□□ -1.97
APM3	YBR288C	TPS1	Q00764	495 aa	Known RBP	2.75	□□□□□ -1.97
APM3	YBR288C	ACL4	Q03771	387 aa		2.75	□□□□□ -1.97
APM3	YBR288C	YLR287C	Q05881	355 aa		2.75	□□□□□ -1.97
APM3	YBR288C	SPA2	P23201	1466 aa	Known RBP	2.74	□□□□□ -1.97
APM3	YBR288C	ZRC1	P20107	442 aa		2.74	□□□□□ -1.97
APM3	YBR288C	BMT2	P38278	337 aa		2.74	□□□□□ -1.97
APM3	YBR288C	PFS1	P38872	237 aa		2.74	□□□□□ -1.97
APM3	YBR288C	YPS6	P40583	537 aa		2.74	□□□□□ -1.97
APM3	YBR288C	FOL3	Q12676	427 aa	Predicted RBP	2.74	□□□□□ -1.97
APM3	YBR288C	YIP5	P53108	310 aa		2.73	□□□□□ -1.97
APM3	YBR288C	KTR6	P54070	446 aa		2.73	□□□□□ -1.97
APM3	YBR288C	SKI8	Q02793	397 aa	Predicted RBP	2.73	□□□□□ -1.97
APM3	YBR288C	HOT1	Q03213	719 aa		2.73	□□□□□ -1.97
APM3	YBR288C	MCH1	Q07376	486 aa		2.73	□□□□□ -1.97
APM3	YBR288C	SFI1	Q12369	946 aa		2.73	□□□□□ -1.97
APM3	YBR288C	PRM7	Q12459	698 aa		2.73	□□□□□ -1.97
APM3	YBR288C	AFI1	Q99222	893 aa		2.73	□□□□□ -1.97
APM3	YBR288C	DPH2	P32461	534 aa		2.72	□□□□□ -1.97
APM3	YBR288C	MRPL27	P36526	146 aa	Predicted RBP	2.72	□□□□□ -1.97
APM3	YBR288C	SEC9	P40357	651 aa		2.72	□□□□□ -1.97
APM3	YBR288C	IGD1	P43598	195 aa		2.72	□□□□□ -1.97
APM3	YBR288C	ATP22	P50273	684 aa	Predicted RBP	2.72	□□□□□ -1.97
APM3	YBR288C	BNI5	P53890	448 aa	Known RBP	2.72	□□□□□ -1.97
APM3	YBR288C	PRM6	Q04705	352 aa		2.72	□□□□□ -1.97
APM3	YBR288C	YPS3	Q12303	508 aa		2.72	□□□□□ -1.97
APM3	YBR288C	YCR024C-B	Q3E7Z8	88 aa		2.72	□□□□□ -1.97
APM3	YBR288C	GAT2	P40209	560 aa		2.71	□□□□□ -1.97
APM3	YBR288C	RRP46	P53256	223 aa	Predicted RBP	2.71	□□□□□ -1.97
APM3	YBR288C	MMR1	Q06324	491 aa		2.71	□□□□□ -1.97
APM3	YBR288C	CEX1	Q12453	761 aa		2.71	□□□□□ -1.97
APM3	YBR288C	BI3	Q9ZZW7	517 aa		2.71	□□□□□ -1.97
APM3	YBR288C	COX13	P32799	129 aa		2.71	□□□□□ -1.98
APM3	YBR288C	HEL1	P36113	551 aa		2.71	□□□□□ -1.98
APM3	YBR288C	STP2	P38704	541 aa		2.71	□□□□□ -1.98
APM3	YBR288C	YER079W	P40052	210 aa	Known RBP	2.71	□□□□□ -1.98
APM3	YBR288C	RPT4	P53549	437 aa	Known RBP	2.71	□□□□□ -1.98
APM3	YBR288C	RAX2	Q12465	1220 aa		2.71	□□□□□ -1.98
APM3	YBR288C	ATP1	P07251	545 aa	Known RBP	2.7	□□□□□ -1.98
APM3	YBR288C	SSC1	P0CS90	654 aa	Known RBP	2.7	□□□□□ -1.98
APM3	YBR288C	ARO3	P14843	370 aa	Known RBP	2.7	□□□□□ -1.98
APM3	YBR288C	YEF1	P32622	495 aa		2.7	□□□□□ -1.98
APM3	YBR288C	NFU1	P32860	256 aa		2.7	□□□□□ -1.98
APM3	YBR288C	NOC2	P39744	710 aa	Known RBP	2.7	□□□□□ -1.98
APM3	YBR288C	LSM5	P40089	93 aa	Known RBP	2.7	□□□□□ -1.98
APM3	YBR288C	RPN9	Q04062	393 aa	Known RBP	2.7	□□□□□ -1.98
APM3	YBR288C	MTR10	Q99189	972 aa		2.7	□□□□□ -1.98
APM3	YBR288C	POM152	P39685	1337 aa		2.69	□□□□□ -1.98
APM3	YBR288C	INH1	P01097	85 aa		2.69	□□□□□ -1.98
APM3	YBR288C	CDC31	P06704	161 aa	Known RBP	2.69	□□□□□ -1.98
APM3	YBR288C	DST1	P07273	309 aa		2.69	□□□□□ -1.98
APM3	YBR288C	ZUO1	P32527	433 aa	Known RBP	2.69	□□□□□ -1.98
APM3	YBR288C	YFL012W	P43580	148 aa		2.69	□□□□□ -1.98
APM3	YBR288C	SPR6	Q01684	191 aa		2.69	□□□□□ -1.98
APM3	YBR288C	FCY22	Q12119	530 aa		2.69	□□□□□ -1.98
APM3	YBR288C	MED2	Q12124	431 aa		2.69	□□□□□ -1.98
APM3	YBR288C	HTZ1	Q12692	134 aa	Known RBP	2.69	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 156.6 ms