RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W GAL3P13045 520 aa4.71□□□□□ -1.66
CDC28YBR160W DAP2P18962 818 aa4.71□□□□□ -1.66
CDC28YBR160W DBP3P20447 523 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W PHO3P24031 467 aa4.71□□□□□ -1.66
CDC28YBR160W MEI5P32489 222 aa4.71□□□□□ -1.66
CDC28YBR160W MRS6P32864 603 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W NIC96P34077 839 aa4.71□□□□□ -1.66
CDC28YBR160W SHE3P38272 425 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W MBA1P38300 278 aa4.71□□□□□ -1.66
CDC28YBR160W SRP72P38688 640 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W EDC3P39998 551 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W PCL6P40038 420 aa4.71□□□□□ -1.66
CDC28YBR160W GAB1P41733 394 aa4.71□□□□□ -1.66
CDC28YBR160W YGR210CP42942 411 aa4.71□□□□□ -1.66
CDC28YBR160W DLD2P46681 530 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W SNG1P46950 547 aa4.71□□□□□ -1.66
CDC28YBR160W NET1P47035 1189 aa4.71□□□□□ -1.66
CDC28YBR160W HXT16P47185 567 aa4.71□□□□□ -1.66
CDC28YBR160W GTO1P48239 356 aa4.71□□□□□ -1.66
CDC28YBR160W MRX6P48564 524 aa4.71□□□□□ -1.66
CDC28YBR160W TOM22P49334 152 aa4.71□□□□□ -1.66
CDC28YBR160W STR3P53101 465 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W SLI1P53304 468 aa4.71□□□□□ -1.66
CDC28YBR160W DUS1P53759 423 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W YNL034WP53963 612 aa4.71□□□□□ -1.66
CDC28YBR160W EFM6P53970 246 aa4.71□□□□□ -1.66
CDC28YBR160W YNL018CP53976 612 aa4.71□□□□□ -1.66
CDC28YBR160W CDC14Q00684 551 aa4.71□□□□□ -1.66
CDC28YBR160W NUP100Q02629 959 aa4.71□□□□□ -1.66
CDC28YBR160W GOT1Q03554 138 aa4.71□□□□□ -1.66
CDC28YBR160W RCO1Q04779 684 aa4.71□□□□□ -1.66
CDC28YBR160W YHC1Q05900 231 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W YLR345WQ06137 509 aa4.71□□□□□ -1.66
CDC28YBR160W CRN1Q06440 651 aa4.71□□□□□ -1.66
CDC28YBR160W VPS36Q06696 566 aa4.71□□□□□ -1.66
CDC28YBR160W SWC7Q06707 132 aa4.71□□□□□ -1.66
CDC28YBR160W GSH2Q08220 491 aa4.71□□□□□ -1.66
CDC28YBR160W SLF1Q12034 447 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W MLH3Q12083 715 aa4.71□□□□□ -1.66
CDC28YBR160W HAL9Q12180 1030 aa4.71□□□□□ -1.66
CDC28YBR160W YOR214CQ12282 236 aa4.71□□□□□ -1.66
CDC28YBR160W YDR061WQ12298 539 aa4.71□□□□□ -1.66
CDC28YBR160W RPN6Q12377 434 aa4.71□□□□□ -1.66
CDC28YBR160W GTT2Q12390 233 aa4.71□□□□□ -1.66
CDC28YBR160W YBR182C-AQ8TGU6 64 aa4.71□□□□□ -1.66
CDC28YBR160W HIS1P00498 297 aaKnown RBP4.7□□□□□ -1.66
CDC28YBR160W ADE4P04046 510 aaKnown RBP4.7□□□□□ -1.66
CDC28YBR160W MAS1P10507 462 aa4.7□□□□□ -1.66
CDC28YBR160W NCP1P16603 691 aaKnown RBP4.7□□□□□ -1.66
CDC28YBR160W YIH1P25637 258 aa4.7□□□□□ -1.66
CDC28YBR160W YUR1P26725 428 aa4.7□□□□□ -1.66
CDC28YBR160W MF(ALPHA)2P32435 120 aa4.7□□□□□ -1.66
CDC28YBR160W IMP3P32899 183 aaPredicted RBP4.7□□□□□ -1.66
CDC28YBR160W ZRT3P34240 503 aa4.7□□□□□ -1.66
CDC28YBR160W MAK5P38112 773 aaPredicted RBP4.7□□□□□ -1.66
CDC28YBR160W SPO73P40031 143 aa4.7□□□□□ -1.66
CDC28YBR160W EMP65P40085 556 aa4.7□□□□□ -1.66
CDC28YBR160W PRE6P40303 254 aaKnown RBP4.7□□□□□ -1.66
CDC28YBR160W UTP18P40362 594 aaPredicted RBP4.7□□□□□ -1.66
CDC28YBR160W YKE4P40544 346 aa4.7□□□□□ -1.66
CDC28YBR160W IST3P40565 148 aaPredicted RBP4.7□□□□□ -1.66
CDC28YBR160W OPT1P40897 799 aa4.7□□□□□ -1.66
CDC28YBR160W BUD13P46947 266 aaPredicted RBP4.7□□□□□ -1.66
CDC28YBR160W MNN5P46982 586 aa4.7□□□□□ -1.66
CDC28YBR160W NIT2P47016 307 aa4.7□□□□□ -1.66
CDC28YBR160W MRH4P53166 561 aa4.7□□□□□ -1.66
CDC28YBR160W IGO1P53897 168 aa4.7□□□□□ -1.66
CDC28YBR160W REG1Q00816 1014 aa4.7□□□□□ -1.66
CDC28YBR160W NUP49Q02199 472 aa4.7□□□□□ -1.66
CDC28YBR160W MRPS16Q02608 121 aa4.7□□□□□ -1.66
CDC28YBR160W YHM2Q04013 314 aa4.7□□□□□ -1.66
CDC28YBR160W RIF2Q06208 395 aa4.7□□□□□ -1.66
CDC28YBR160W ARO10Q06408 635 aa4.7□□□□□ -1.66
CDC28YBR160W DDC1Q08949 612 aa4.7□□□□□ -1.66
CDC28YBR160W MRH1Q12117 320 aaPredicted RBP4.7□□□□□ -1.66
CDC28YBR160W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
CDC28YBR160W ATG31Q12421 196 aa4.7□□□□□ -1.66
CDC28YBR160W FMP16Q12497 93 aa4.7□□□□□ -1.66
CDC28YBR160W PDE2P06776 526 aa4.69□□□□□ -1.66
CDC28YBR160W TRP4P07285 380 aaPredicted RBP4.69□□□□□ -1.66
CDC28YBR160W MDH1P17505 334 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
CDC28YBR160W SAR1P20606 190 aaKnown RBP4.69□□□□□ -1.66
CDC28YBR160W GRR1P24814 1151 aa4.69□□□□□ -1.66
CDC28YBR160W CPR3P25719 182 aa4.69□□□□□ -1.66
CDC28YBR160W VMA8P32610 256 aaKnown RBP4.69□□□□□ -1.66
CDC28YBR160W GLG1P36143 616 aa4.69□□□□□ -1.66
CDC28YBR160W PIM1P36775 1133 aa4.69□□□□□ -1.66
CDC28YBR160W YHL041WP38730 149 aa4.69□□□□□ -1.66
CDC28YBR160W RIM4P38741 713 aa4.69□□□□□ -1.66
CDC28YBR160W NAB3P38996 802 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
CDC28YBR160W DUN1P39009 513 aa4.69□□□□□ -1.66
CDC28YBR160W MNN9P39107 395 aaKnown RBP4.69□□□□□ -1.66
CDC28YBR160W ALD5P40047 520 aaKnown RBP4.69□□□□□ -1.66
CDC28YBR160W GPP2P40106 250 aaKnown RBP4.69□□□□□ -1.66
CDC28YBR160W MPM1P40364 252 aa4.69□□□□□ -1.66
CDC28YBR160W SSY5P47002 699 aa4.69□□□□□ -1.66
CDC28YBR160W IRC18P47056 224 aa4.69□□□□□ -1.66
CDC28YBR160W APS3P47064 194 aa4.69□□□□□ -1.66
CDC28YBR160W HAM1P47119 197 aaKnown RBP4.69□□□□□ -1.66
CDC28YBR160W BIO3P50277 480 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms