RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C SCH9P11792 824 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C SEC63P14906 663 aa2.22□□□□□ -2.05
CLN3YAL040C EXO70P19658 623 aa2.22□□□□□ -2.05
CLN3YAL040C DBP3P20447 523 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C DAL81P21657 970 aa2.22□□□□□ -2.05
CLN3YAL040C ERG8P24521 451 aa2.22□□□□□ -2.05
CLN3YAL040C YSP3P25036 478 aa2.22□□□□□ -2.05
CLN3YAL040C PHO84P25297 587 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C SPR1P32603 445 aa2.22□□□□□ -2.05
CLN3YAL040C MRE11P32829 692 aa2.22□□□□□ -2.05
CLN3YAL040C IMP3P32899 183 aaPredicted RBP2.22□□□□□ -2.05
CLN3YAL040C PPQ1P32945 549 aa2.22□□□□□ -2.05
CLN3YAL040C RPT5P33297 434 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C SUR1P33300 382 aa2.22□□□□□ -2.05
CLN3YAL040C ADH5P38113 351 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C LDB7P38210 180 aa2.22□□□□□ -2.05
CLN3YAL040C ARP1P38696 384 aa2.22□□□□□ -2.05
CLN3YAL040C EFM1P38732 585 aa2.22□□□□□ -2.05
CLN3YAL040C MED6P38782 295 aa2.22□□□□□ -2.05
CLN3YAL040C TRM5P38793 499 aa2.22□□□□□ -2.05
CLN3YAL040C MTG2P38860 518 aa2.22□□□□□ -2.05
CLN3YAL040C CCT6P39079 546 aa2.22□□□□□ -2.05
CLN3YAL040C ARB1P40024 610 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C ALG8P40351 577 aa2.22□□□□□ -2.05
CLN3YAL040C YRB1P41920 201 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C CAK1P43568 368 aaPredicted RBP2.22□□□□□ -2.05
CLN3YAL040C BUD13P46947 266 aaPredicted RBP2.22□□□□□ -2.05
CLN3YAL040C RPN14P53196 417 aa2.22□□□□□ -2.05
CLN3YAL040C RCF2P53721 224 aa2.22□□□□□ -2.05
CLN3YAL040C IST1P53843 298 aaPredicted RBP2.22□□□□□ -2.05
CLN3YAL040C TEX1P53851 422 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C REX2P54964 269 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C LSM3P57743 89 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C ARG5,6Q01217 863 aa2.22□□□□□ -2.05
CLN3YAL040C REC102Q02721 264 aa2.22□□□□□ -2.05
CLN3YAL040C PET117Q02771 107 aa2.22□□□□□ -2.05
CLN3YAL040C YPL108WQ02872 168 aaPredicted RBP2.22□□□□□ -2.05
CLN3YAL040C GAS3Q03655 524 aa2.22□□□□□ -2.05
CLN3YAL040C HPT1Q04178 221 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C TRM12Q04235 462 aa2.22□□□□□ -2.05
CLN3YAL040C SEG1Q04279 960 aa2.22□□□□□ -2.05
CLN3YAL040C RPC11Q04307 110 aaPredicted RBP2.22□□□□□ -2.05
CLN3YAL040C SPC24Q04477 213 aa2.22□□□□□ -2.05
CLN3YAL040C GLO2Q05584 274 aa2.22□□□□□ -2.05
CLN3YAL040C DBP9Q06218 594 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C FMP45Q07651 309 aa2.22□□□□□ -2.05
CLN3YAL040C YEH1Q07804 573 aa2.22□□□□□ -2.05
CLN3YAL040C YEH2Q07950 538 aa2.22□□□□□ -2.05
CLN3YAL040C YPL272CQ08984 517 aa2.22□□□□□ -2.05
CLN3YAL040C YPR202WQ08993 238 aa2.22□□□□□ -2.05
CLN3YAL040C ATG29Q12092 213 aa2.22□□□□□ -2.05
CLN3YAL040C PER33Q12144 273 aa2.22□□□□□ -2.05
CLN3YAL040C RPN5Q12250 445 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C HER1Q12276 1246 aa2.22□□□□□ -2.05
CLN3YAL040C ICT1Q12385 394 aa2.22□□□□□ -2.05
CLN3YAL040C REV1P12689 985 aa2.21□□□□□ -2.06
CLN3YAL040C STE12P13574 688 aa2.21□□□□□ -2.06
CLN3YAL040C ABF1P14164 731 aa2.21□□□□□ -2.06
CLN3YAL040C PMA2P19657 947 aa2.21□□□□□ -2.06
CLN3YAL040C YCR090CP25654 182 aaKnown RBP2.21□□□□□ -2.06
CLN3YAL040C SYN8P31377 255 aa2.21□□□□□ -2.06
CLN3YAL040C RIM1P32445 135 aaKnown RBP2.21□□□□□ -2.06
CLN3YAL040C SEC66P33754 206 aa2.21□□□□□ -2.06
CLN3YAL040C YKL097CP34245 136 aa2.21□□□□□ -2.06
CLN3YAL040C MRPL40P36534 297 aa2.21□□□□□ -2.06
CLN3YAL040C APT2P36973 181 aa2.21□□□□□ -2.06
CLN3YAL040C CTP1P38152 299 aa2.21□□□□□ -2.06
CLN3YAL040C DHH1P39517 506 aaKnown RBP2.21□□□□□ -2.06
CLN3YAL040C EXO1P39875 702 aa2.21□□□□□ -2.06
CLN3YAL040C YEL020CP39994 560 aa2.21□□□□□ -2.06
CLN3YAL040C MMF1P40185 145 aaKnown RBP2.21□□□□□ -2.06
CLN3YAL040C COA1P40452 197 aa2.21□□□□□ -2.06
CLN3YAL040C GAT1P43574 510 aa2.21□□□□□ -2.06
CLN3YAL040C PTR3P43606 678 aa2.21□□□□□ -2.06
CLN3YAL040C STB2P46679 850 aa2.21□□□□□ -2.06
CLN3YAL040C AIM23P47015 356 aa2.21□□□□□ -2.06
CLN3YAL040C NUP84P52891 726 aa2.21□□□□□ -2.06
CLN3YAL040C BOL2P53082 120 aa2.21□□□□□ -2.06
CLN3YAL040C YNL143CP53908 130 aa2.21□□□□□ -2.06
CLN3YAL040C KAP120Q02932 1032 aa2.21□□□□□ -2.06
CLN3YAL040C EFR3Q03653 782 aaKnown RBP2.21□□□□□ -2.06
CLN3YAL040C ACL4Q03771 387 aa2.21□□□□□ -2.06
CLN3YAL040C ARX1Q03862 593 aaKnown RBP2.21□□□□□ -2.06
CLN3YAL040C ROY1Q04847 553 aa2.21□□□□□ -2.06
CLN3YAL040C SEC10Q06245 871 aa2.21□□□□□ -2.06
CLN3YAL040C PHO92Q06390 306 aa2.21□□□□□ -2.06
CLN3YAL040C MCP2Q06567 569 aa2.21□□□□□ -2.06
CLN3YAL040C VPS36Q06696 566 aa2.21□□□□□ -2.06
CLN3YAL040C ASA1Q06822 443 aa2.21□□□□□ -2.06
CLN3YAL040C ESA1Q08649 445 aa2.21□□□□□ -2.06
CLN3YAL040C ERG27Q12452 347 aaKnown RBP2.21□□□□□ -2.06
CLN3YAL040C NMT1P14743 455 aa2.2□□□□□ -2.06
CLN3YAL040C YAP1P19880 650 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C BUD14P27637 709 aa2.2□□□□□ -2.06
CLN3YAL040C YJU2P28320 278 aaPredicted RBP2.2□□□□□ -2.06
CLN3YAL040C DPH5P32469 300 aaPredicted RBP2.2□□□□□ -2.06
CLN3YAL040C VPS17P32913 551 aa2.2□□□□□ -2.06
CLN3YAL040C SDH3P33421 198 aa2.2□□□□□ -2.06
CLN3YAL040C SKT5P34226 696 aa2.2□□□□□ -2.06
CLN3YAL040C GLG1P36143 616 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms