RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W FMP42Q04991 504 aa1.99□□□□□ -2.09
SNC1YAL030W YMR034CQ05131 434 aaPredicted RBP1.99□□□□□ -2.09
SNC1YAL030W PEX27Q08580 376 aa1.99□□□□□ -2.09
SNC1YAL030W YPR022CQ12139 1133 aa1.99□□□□□ -2.09
SNC1YAL030W RAD61Q99359 647 aa1.99□□□□□ -2.09
SNC1YAL030W PAB1P04147 577 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09 RIP-Chip
SNC1YAL030W RPL15AP05748 204 aaKnown RBP1.98□□□□□ -2.09
SNC1YAL030W MAS1P10507 462 aa1.98□□□□□ -2.09
SNC1YAL030W MRS3P10566 314 aa1.98□□□□□ -2.09
SNC1YAL030W MAS2P11914 482 aa1.98□□□□□ -2.09
SNC1YAL030W MSS116P15424 664 aaKnown RBP1.98□□□□□ -2.09
SNC1YAL030W DBP3P20447 523 aaKnown RBP1.98□□□□□ -2.09
SNC1YAL030W SAG1P20840 650 aa1.98□□□□□ -2.09
SNC1YAL030W GRR1P24814 1151 aa1.98□□□□□ -2.09
SNC1YAL030W SPS22P25380 463 aa1.98□□□□□ -2.09
SNC1YAL030W YCR022CP25620 114 aa1.98□□□□□ -2.09
SNC1YAL030W MSK1P32048 576 aa1.98□□□□□ -2.09
SNC1YAL030W SSE1P32589 693 aaKnown RBP1.98□□□□□ -2.09
SNC1YAL030W TOA2P32774 122 aa1.98□□□□□ -2.09
SNC1YAL030W LOS1P33418 1100 aaPredicted RBP1.98□□□□□ -2.09
SNC1YAL030W PMU1P36069 295 aa1.98□□□□□ -2.09
SNC1YAL030W MRPL40P36534 297 aa1.98□□□□□ -2.09
SNC1YAL030W MIX23P38162 196 aa1.98□□□□□ -2.09
SNC1YAL030W YHR177WP38867 453 aa1.98□□□□□ -2.09
SNC1YAL030W MET30P39014 640 aa1.98□□□□□ -2.09
SNC1YAL030W DHH1P39517 506 aaKnown RBP1.98□□□□□ -2.09
SNC1YAL030W FAA2P39518 744 aa1.98□□□□□ -2.09
SNC1YAL030W YND1P40009 630 aa1.98□□□□□ -2.09
SNC1YAL030W YMR134WP40207 237 aa1.98□□□□□ -2.09
SNC1YAL030W YJL070CP40361 888 aa1.98□□□□□ -2.09
SNC1YAL030W TES1P41903 349 aaKnown RBP1.98□□□□□ -2.09
SNC1YAL030W RRN9P53437 365 aa1.98□□□□□ -2.09
SNC1YAL030W YMR310CQ04867 317 aaPredicted RBP1.98□□□□□ -2.09
SNC1YAL030W RTT103Q05543 409 aa1.98□□□□□ -2.09
SNC1YAL030W ECM7Q06200 448 aa1.98□□□□□ -2.09
SNC1YAL030W YAP7Q08182 245 aa1.98□□□□□ -2.09
SNC1YAL030W SRL1Q08673 210 aa1.98□□□□□ -2.09
SNC1YAL030W RAX1Q08760 435 aa1.98□□□□□ -2.09
SNC1YAL030W YPL199CQ08954 240 aa1.98□□□□□ -2.09
SNC1YAL030W YIL002W-AQ3E7Z5 69 aa1.98□□□□□ -2.09
SNC1YAL030W OPI3P05375 206 aa1.97□□□□□ -2.09
SNC1YAL030W TPK3P05986 398 aa1.97□□□□□ -2.09
SNC1YAL030W ATP1P07251 545 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W RPC40P07703 335 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W RPL20AP0CX23 172 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W RPL20BP0CX24 172 aaPredicted RBP1.97□□□□□ -2.09
SNC1YAL030W MRPL8P22353 238 aa1.97□□□□□ -2.09
SNC1YAL030W YCR043CP25361 127 aa1.97□□□□□ -2.09
SNC1YAL030W ITR1P30605 584 aa1.97□□□□□ -2.09
SNC1YAL030W SEC1P30619 724 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W YEF1P32622 495 aa1.97□□□□□ -2.09
SNC1YAL030W VAM7P32912 316 aa1.97□□□□□ -2.09
SNC1YAL030W MCR1P36060 302 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W VPS45P38932 577 aa1.97□□□□□ -2.09
SNC1YAL030W MNN9P39107 395 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W RTT105P40063 208 aa1.97□□□□□ -2.09
SNC1YAL030W SIM1P40472 476 aa1.97□□□□□ -2.09
SNC1YAL030W LYS12P40495 371 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W SNL1P40548 159 aa1.97□□□□□ -2.09
SNC1YAL030W TOS3P43637 560 aa1.97□□□□□ -2.09
SNC1YAL030W YDL186WP48568 277 aa1.97□□□□□ -2.09
SNC1YAL030W TOS2P50078 622 aa1.97□□□□□ -2.09
SNC1YAL030W PHB2P50085 310 aa1.97□□□□□ -2.09
SNC1YAL030W YGR117CP53270 476 aa1.97□□□□□ -2.09
SNC1YAL030W YNL146WP53906 100 aa1.97□□□□□ -2.09
SNC1YAL030W MPS1P54199 764 aa1.97□□□□□ -2.09
SNC1YAL030W EGD1Q02642 157 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W YPL068CQ02749 293 aa1.97□□□□□ -2.09
SNC1YAL030W DIG1Q03063 452 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W PIR3Q03180 325 aa1.97□□□□□ -2.09
SNC1YAL030W BCH1Q05029 724 aa1.97□□□□□ -2.09
SNC1YAL030W STE23Q06010 1027 aa1.97□□□□□ -2.09
SNC1YAL030W LDS2Q08218 356 aa1.97□□□□□ -2.09
SNC1YAL030W DAP1Q12091 152 aa1.97□□□□□ -2.09
SNC1YAL030W AIM45Q12480 344 aaKnown RBP1.97□□□□□ -2.09
SNC1YAL030W POM152P39685 1337 aa1.96□□□□□ -2.1
SNC1YAL030W HEM2P05373 342 aa1.96□□□□□ -2.1
SNC1YAL030W GAL3P13045 520 aa1.96□□□□□ -2.1
SNC1YAL030W CLN3P13365 580 aa1.96□□□□□ -2.1
SNC1YAL030W PUT4P15380 627 aa1.96□□□□□ -2.1
SNC1YAL030W SAM2P19358 384 aaKnown RBP1.96□□□□□ -2.1
SNC1YAL030W DBR1P24309 405 aaKnown RBP1.96□□□□□ -2.1
SNC1YAL030W YCL068CP25593 260 aa1.96□□□□□ -2.1
SNC1YAL030W YBR139WP38109 508 aa1.96□□□□□ -2.1
SNC1YAL030W YBP1P38315 674 aa1.96□□□□□ -2.1
SNC1YAL030W MTC4P38335 694 aaKnown RBP1.96□□□□□ -2.1
SNC1YAL030W TIF5P38431 405 aaKnown RBP1.96□□□□□ -2.1
SNC1YAL030W SEC9P40357 651 aa1.96□□□□□ -2.1
SNC1YAL030W ATM1P40416 690 aa1.96□□□□□ -2.1
SNC1YAL030W RPR2P40571 144 aa1.96□□□□□ -2.1
SNC1YAL030W LOH1P47055 219 aa1.96□□□□□ -2.1
SNC1YAL030W AZR1P50080 613 aa1.96□□□□□ -2.1
SNC1YAL030W COS10P52924 374 aa1.96□□□□□ -2.1
SNC1YAL030W YGL114WP53134 725 aa1.96□□□□□ -2.1
SNC1YAL030W RRP46P53256 223 aaPredicted RBP1.96□□□□□ -2.1
SNC1YAL030W GRS2Q06817 618 aa1.96□□□□□ -2.1
SNC1YAL030W ASA1Q06822 443 aa1.96□□□□□ -2.1
SNC1YAL030W SNA4Q07549 140 aa1.96□□□□□ -2.1
SNC1YAL030W AYT1Q12226 474 aa1.96□□□□□ -2.1
SNC1YAL030W RGT2Q12300 763 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms