RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	CDC12	P32468	407 aa	Known RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	UGP1	P32861	499 aa	Known RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	PET112	P33893	541 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	AST1	P35183	429 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	TSL1	P38427	1098 aa	Known RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	TPA1	P40032	644 aa	Known RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	YJL068C	P40363	299 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	MRPS18	P42847	217 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	IBA57	P47158	497 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	GPI8	P49018	411 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	ATP22	P50273	684 aa	Predicted RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	FHN1	P53279	174 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	GPI11	Q06636	219 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	YLR036C	Q07986	203 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	YTM1	Q12024	460 aa	Predicted RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	YDR061W	Q12298	539 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	PFK27	Q12471	397 aa	Predicted RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	YKL033W-A	Q86ZR7	236 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	PUT2	P07275	575 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	RPS1B	P23248	255 aa	Known RBP	5.73	□□□□□ -1.49
LDS1	YAL018C	TAH1	P25638	111 aa	Predicted RBP	5.73	□□□□□ -1.49
LDS1	YAL018C	BUD14	P27637	709 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	TEF4	P36008	412 aa	Known RBP	5.73	□□□□□ -1.49
LDS1	YAL018C	MRPL15	P36523	253 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	STP2	P38704	541 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	YHR177W	P38867	453 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	VRG4	P40107	337 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	AGP3	P43548	558 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	RRN5	Q02983	363 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	DBP9	Q06218	594 aa	Known RBP	5.73	□□□□□ -1.49
LDS1	YAL018C	BSC6	Q08280	497 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	MMT2	Q08970	484 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	SFM1	Q12314	213 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	PSY3	Q12318	242 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	YOL159C-A	Q3E769	90 aa		5.73	□□□□□ -1.49
LDS1	YAL018C	GPH1	P06738	902 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	ZWF1	P11412	505 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	FBA1	P14540	359 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	YAK1	P14680	807 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	MER1	P16523	270 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	VPS33	P20795	691 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	MSN1	P22148	382 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	RPC82	P32349	654 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	ARP2	P32381	391 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	APE2	P32454	952 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	SWH1	P35845	1188 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	MED8	P38304	223 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	YBR238C	P38330	731 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	LYS12	P40495	371 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	VHR1	P40522	640 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	RPL10	P41805	221 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	PMT4	P46971	762 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	TIM54	P47045	478 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	UBC9	P50623	157 aa	Predicted RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	YDR239C	Q03780	787 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	RQC1	Q05468	723 aa	Known RBP	5.72	□□□□□ -1.49
LDS1	YAL018C	SPO77	Q06134	477 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	FDH1	Q08911	376 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	YDL199C	Q12407	687 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	SEC39	Q12745	709 aa		5.72	□□□□□ -1.49
LDS1	YAL018C	RPB5	P20434	215 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	MSN2	P33748	704 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	SPC34	P36131	295 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	RIB1	P38066	345 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	MTG2	P38860	518 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	AIM2	P39721	246 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	THO1	P40040	218 aa	Known RBP	5.71	□□□□□ -1.5
LDS1	YAL018C	YIL165C	P40446	119 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	SNL1	P40548	159 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	CFD1	P40558	293 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	YGR201C	P42936	225 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	ALR2	P43553	858 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	ASK10	P48361	1146 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	RPS12	P48589	143 aa	Known RBP	5.71	□□□□□ -1.5
LDS1	YAL018C	NRM1	P53718	249 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	IGO1	P53897	168 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	ERG13	P54839	491 aa	Known RBP	5.71	□□□□□ -1.5
LDS1	YAL018C	RHO4	Q00246	291 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	MSC1	Q03104	513 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	YMR310C	Q04867	317 aa	Predicted RBP	5.71	□□□□□ -1.5
LDS1	YAL018C	ARR1	Q06596	294 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	YPR172W	Q06608	200 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
LDS1	YAL018C	VIK1	Q12045	647 aa		5.71	□□□□□ -1.5
LDS1	YAL018C	WTM1	Q12363	437 aa	Known RBP	5.71	□□□□□ -1.5
LDS1	YAL018C	GAL4	P04386	881 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	HTS1	P07263	546 aa	Known RBP	5.7	□□□□□ -1.5
LDS1	YAL018C	GRR1	P24814	1151 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	ARE1	P25628	610 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	CDC3	P32457	520 aa	Known RBP	5.7	□□□□□ -1.5
LDS1	YAL018C	LOT5	P34234	306 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	ZTA1	P38230	334 aa	Known RBP	5.7	□□□□□ -1.5
LDS1	YAL018C	UME6	P39001	836 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	FAU1	P40099	211 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	YIL086C	P40503	102 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	TED1	P40533	473 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	ARF3	P40994	183 aa	RIP-Chip data	5.7	□□□□□ -1.5	not detected
LDS1	YAL018C	ELP2	P42935	788 aa		5.7	□□□□□ -1.5
LDS1	YAL018C	DUG1	P43616	481 aa	Known RBP	5.7	□□□□□ -1.5
LDS1	YAL018C	ALK1	P43633	760 aa	Known RBP	5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms