RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 RTS3P53289 263 aa8.25□□□□□ -1.09
LSR1LSR1 SWF1Q04629 336 aa8.25□□□□□ -1.09
LSR1LSR1 COA4Q05809 96 aa8.25□□□□□ -1.09
LSR1LSR1 YLR446WQ06204 433 aa8.25□□□□□ -1.09
LSR1LSR1 ARO10Q06408 635 aa8.25□□□□□ -1.09
LSR1LSR1 TEN1Q07921 160 aa8.25□□□□□ -1.09
LSR1LSR1 ATG29Q12092 213 aa8.25□□□□□ -1.09
LSR1LSR1 BAG7Q12128 409 aa8.25□□□□□ -1.09
LSR1LSR1 HMG1P12683 1054 aa8.24□□□□□ -1.09
LSR1LSR1 SEN2P16658 377 aa8.24□□□□□ -1.09
LSR1LSR1 SEC2P17065 759 aa8.24□□□□□ -1.09
LSR1LSR1 KIN3P22209 435 aa8.24□□□□□ -1.09
LSR1LSR1 CTS1P29029 562 aa8.24□□□□□ -1.09
LSR1LSR1 UTP30P36144 274 aaKnown RBP8.24□□□□□ -1.09
LSR1LSR1 IPI1P38803 334 aaPredicted RBP8.24□□□□□ -1.09
LSR1LSR1 YHR177WP38867 453 aa8.24□□□□□ -1.09
LSR1LSR1 MIT1P40002 666 aa8.24□□□□□ -1.09
LSR1LSR1 DOT6P40059 670 aaKnown RBP8.24□□□□□ -1.09
LSR1LSR1 FMP10P40098 244 aa8.24□□□□□ -1.09
LSR1LSR1 YJL218WP40892 196 aaKnown RBP8.24□□□□□ -1.09
LSR1LSR1 AZF1P41696 914 aa8.24□□□□□ -1.09
LSR1LSR1 SER2P42941 309 aa8.24□□□□□ -1.09
LSR1LSR1 FET5P43561 622 aa8.24□□□□□ -1.09
LSR1LSR1 PYK2P52489 506 aaKnown RBP8.24□□□□□ -1.09
LSR1LSR1 MTO1P53070 669 aa8.24□□□□□ -1.09
LSR1LSR1 MPC1P53157 130 aaKnown RBP8.24□□□□□ -1.09
LSR1LSR1 MKC7P53379 596 aa8.24□□□□□ -1.09
LSR1LSR1 ZRG17P53735 605 aa8.24□□□□□ -1.09
LSR1LSR1 YPL071CQ02864 156 aa8.24□□□□□ -1.09
LSR1LSR1 ARX1Q03862 593 aaKnown RBP8.24□□□□□ -1.09
LSR1LSR1 YDR514CQ04408 483 aa8.24□□□□□ -1.09
LSR1LSR1 YLR036CQ07986 203 aa8.24□□□□□ -1.09
LSR1LSR1 BSC1Q12140 328 aa8.24□□□□□ -1.09
LSR1LSR1 YPL066WQ12194 479 aa8.24□□□□□ -1.09
LSR1LSR1 SFM1Q12314 213 aa8.24□□□□□ -1.09
LSR1LSR1 DBP3P20447 523 aaKnown RBP8.23□□□□□ -1.09
LSR1LSR1 TAH1P25638 111 aaPredicted RBP8.23□□□□□ -1.09
LSR1LSR1 OAC1P32332 324 aa8.23□□□□□ -1.09
LSR1LSR1 ASF2P32448 525 aaPredicted RBP8.23□□□□□ -1.09
LSR1LSR1 PIM1P36775 1133 aa8.23□□□□□ -1.09
LSR1LSR1 AXL2P38928 823 aa8.23□□□□□ -1.09
LSR1LSR1 BUR6P40096 142 aa8.23□□□□□ -1.09
LSR1LSR1 YGR201CP42936 225 aa8.23□□□□□ -1.09
LSR1LSR1 IRC7P43623 340 aa8.23□□□□□ -1.09
LSR1LSR1 DIE2P50076 525 aa8.23□□□□□ -1.09
LSR1LSR1 FLC3P53121 802 aa8.23□□□□□ -1.09
LSR1LSR1 YNR065CP53751 1116 aa8.23□□□□□ -1.09
LSR1LSR1 CSL4P53859 292 aaPredicted RBP8.23□□□□□ -1.09
LSR1LSR1 PUN1Q06991 263 aa8.23□□□□□ -1.09
LSR1LSR1 NBA1Q08229 501 aaKnown RBP8.23□□□□□ -1.09
LSR1LSR1 PEX27Q08580 376 aa8.23□□□□□ -1.09
LSR1LSR1 YTM1Q12024 460 aaPredicted RBP8.23□□□□□ -1.09
LSR1LSR1 RTR2Q12378 196 aa8.23□□□□□ -1.09
LSR1LSR1 RPS17AP02407 136 aaKnown RBP8.22□□□□□ -1.09
LSR1LSR1 AI4P03878 556 aa8.22□□□□□ -1.09
LSR1LSR1 ADE5,7P07244 802 aaKnown RBP8.22□□□□□ -1.09
LSR1LSR1 RPS17BP14127 136 aaKnown RBP8.22□□□□□ -1.09
LSR1LSR1 MGM101P32787 269 aaKnown RBP8.22□□□□□ -1.09
LSR1LSR1 KKQ8P36004 724 aa8.22□□□□□ -1.09
LSR1LSR1 DHR2P36009 735 aaPredicted RBP8.22□□□□□ -1.09
LSR1LSR1 YRO2P38079 344 aa8.22□□□□□ -1.09
LSR1LSR1 MUM2P38236 366 aa8.22□□□□□ -1.09
LSR1LSR1 CTF8P38877 133 aa8.22□□□□□ -1.09
LSR1LSR1 RCY1P39531 840 aa8.22□□□□□ -1.09
LSR1LSR1 YTA6P40328 754 aa8.22□□□□□ -1.09
LSR1LSR1 SNX4P47057 423 aa8.22□□□□□ -1.09
LSR1LSR1 COG7P53195 279 aa8.22□□□□□ -1.09
LSR1LSR1 YGR079WP53249 370 aa8.22□□□□□ -1.09
LSR1LSR1 MRPL13Q02204 264 aa8.22□□□□□ -1.09
LSR1LSR1 RPC11Q04307 110 aaPredicted RBP8.22□□□□□ -1.09
LSR1LSR1 TMN2Q04562 672 aa8.22□□□□□ -1.09
LSR1LSR1 EAF1Q06337 982 aa8.22□□□□□ -1.09
LSR1LSR1 DIN7Q12086 430 aa8.22□□□□□ -1.09
LSR1LSR1 YPR1Q12458 312 aa8.22□□□□□ -1.09
LSR1LSR1 LAG2Q92325 660 aa8.22□□□□□ -1.09
LSR1LSR1 PDE2P06776 526 aa8.21□□□□□ -1.1
LSR1LSR1 PET9P18239 318 aaKnown RBP8.21□□□□□ -1.1
LSR1LSR1 MKK1P32490 508 aa8.21□□□□□ -1.1
LSR1LSR1 NDC1P32500 655 aa8.21□□□□□ -1.1
LSR1LSR1 SSO1P32867 290 aa8.21□□□□□ -1.1
LSR1LSR1 PPQ1P32945 549 aa8.21□□□□□ -1.1
LSR1LSR1 SCO2P38072 301 aa8.21□□□□□ -1.1
LSR1LSR1 MBA1P38300 278 aa8.21□□□□□ -1.1
LSR1LSR1 GIC1P38785 314 aa8.21□□□□□ -1.1
LSR1LSR1 GDI1P39958 451 aaKnown RBP8.21□□□□□ -1.1
LSR1LSR1 YKE4P40544 346 aa8.21□□□□□ -1.1
LSR1LSR1 QRI7P43122 407 aa8.21□□□□□ -1.1
LSR1LSR1 PAC10P48363 199 aa8.21□□□□□ -1.1
LSR1LSR1 RBG2P53295 368 aaKnown RBP8.21□□□□□ -1.1
LSR1LSR1 TUB4P53378 473 aa8.21□□□□□ -1.1
LSR1LSR1 HEH2Q03281 663 aa8.21□□□□□ -1.1
LSR1LSR1 ROT1Q03691 256 aa8.21□□□□□ -1.1
LSR1LSR1 RIM13Q03792 727 aa8.21□□□□□ -1.1
LSR1LSR1 ARG7Q04728 441 aa8.21□□□□□ -1.1
LSR1LSR1 RNH202Q05635 350 aa8.21□□□□□ -1.1
LSR1LSR1 HAL9Q12180 1030 aa8.21□□□□□ -1.1
LSR1LSR1 YDR061WQ12298 539 aa8.21□□□□□ -1.1
LSR1LSR1 MET2P08465 486 aa8.2□□□□□ -1.1
LSR1LSR1 SAR1P20606 190 aaKnown RBP8.2□□□□□ -1.1
LSR1LSR1 CHL1P22516 861 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms