RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 HSD17B14Q9BPX1 270 aa9.82□□□□□ -0.84
HLA-B-258ENST00000640615 NT5C3AQ9H0P0 336 aa9.82□□□□□ -0.84
HLA-B-258ENST00000640615 TUFT1Q9NNX1 390 aa9.82□□□□□ -0.84
HLA-B-258ENST00000640615 HOOK1Q9UJC3 728 aaKnown RBP9.82□□□□□ -0.84
HLA-B-258ENST00000640615 TELO2Q9Y4R8 837 aa9.82□□□□□ -0.84
HLA-B-258ENST00000640615 TRIM17Q9Y577 477 aa9.82□□□□□ -0.84
HLA-B-258ENST00000640615 CENPFP49454 3210 aa9.82□□□□□ -0.84
HLA-B-258ENST00000640615 GSTTP1A0A1W2PQM5 241 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 POTEFA5A3E0 1075 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 BACH1O14867 736 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 NKRFO15226 690 aaKnown RBP eCLIP9.81□□□□□ -0.84
HLA-B-258ENST00000640615 CTAGE5O15320 804 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 ADCY3O60266 1144 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 SUPT20HL2P0C7V6 817 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 ELNP15502 786 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 PTGS1P23219 599 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 CNGA1P29973 690 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 AFMP43652 599 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 QARSP47897 775 aaKnown RBP9.81□□□□□ -0.84
HLA-B-258ENST00000640615 PRMT2P55345 433 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 PSMC5P62195 406 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 DHX8Q14562 1220 aaKnown RBP9.81□□□□□ -0.84
HLA-B-258ENST00000640615 DUSP28Q4G0W2 176 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 NAALADL2Q58DX5 795 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 HYIQ5T013 277 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 GJC2Q5T442 439 aaPredicted RBP9.81□□□□□ -0.84
HLA-B-258ENST00000640615 SWSAP1Q6NVH7 229 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 PDXDC2PQ6P474 469 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 POTEGQ6S5H5 508 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 ABHD15Q6UXT9 468 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 SEPT1Q8WYJ6 367 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 RAD54LQ92698 747 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 STAMQ92783 540 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 PAGE5Q96GU1 130 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 LXNQ9BS40 222 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 CUEDC2Q9H467 287 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 ZSWIM4Q9H7M6 989 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 GABBR1Q9UBS5 961 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 STK17AQ9UEE5 414 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 NRBP1Q9UHY1 535 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 FAM184BQ9ULE4 1060 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 DNM3Q9UQ16 869 aa9.81□□□□□ -0.84
HLA-B-258ENST00000640615 ZNFX1Q9P2E3 1918 aaKnown RBP9.81□□□□□ -0.84
HLA-B-258ENST00000640615 E9PMD0 336 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 DYNC1LI2O43237 492 aaPredicted RBP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 DKC1O60832 514 aaKnown RBP eCLIP9.8□□□□□ -0.848e-8■□□□□ 11.3
HLA-B-258ENST00000640615 LETM1O95202 739 aaPredicted RBP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 ATG7O95352 703 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 SSBP05455 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 PLA2G4BP0C869 781 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 MUTP22033 750 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 TCF7P36402 384 aaPredicted RBP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 PSMC6P62333 389 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 ARHGAP1Q07960 439 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 CACNB2Q08289 660 aaPredicted RBP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 TRIM32Q13049 653 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 PNOCQ13519 176 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 MCM6Q14566 821 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 ZSCAN23Q3MJ62 389 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 HSDL1Q3SXM5 330 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 UTP14CQ5TAP6 766 aaKnown RBP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 SV2BQ7L1I2 683 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 TRMT1LQ7Z2T5 733 aaKnown RBP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 KCNK18Q7Z418 384 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 CKAP2LQ8IYA6 745 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 GRAMD1CQ8IYS0 662 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 TRPV1Q8NER1 839 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 OR6J1Q8NGC5 347 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 PXYLP1Q8TE99 480 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 PIGOQ8TEQ8 1089 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 LRRC15Q8TF66 581 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 LARP4BQ92615 738 aaKnown RBP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 ATP6V0A1Q93050 837 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 NACC1Q96RE7 527 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 GPR20Q99678 358 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 ANP32EQ9BTT0 268 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 ZNF302Q9NR11 478 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 BLOC1S4Q9NUP1 217 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 WRAP73Q9P2S5 460 aaPredicted RBP9.8□□□□□ -0.84
HLA-B-258ENST00000640615 BRCA2P51587 3418 aa9.8□□□□□ -0.84
HLA-B-258ENST00000640615 ZSWIM8A7E2V4 1837 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 PLXNA1Q9UIW2 1896 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 ZBTB39O15060 712 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 ADCY6O43306 1168 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 HMGCRP04035 888 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 CYBAP13498 195 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 PRKAR2AP13861 404 aaKnown RBP9.79□□□□□ -0.84
HLA-B-258ENST00000640615 AKR1A1P14550 325 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 MDM2Q00987 491 aaPredicted RBP9.79□□□□□ -0.84
HLA-B-258ENST00000640615 AMPD3Q01432 767 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 POSTNQ15063 836 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 UGCGQ16739 394 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 FAM160B1Q5W0V3 765 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 SH3RF1Q7Z6J0 888 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 CCDC60Q8IWA6 550 aaPredicted RBP9.79□□□□□ -0.84
HLA-B-258ENST00000640615 C4orf19Q8IY42 314 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 ELOA2Q8IYF1 753 aaPredicted RBP9.79□□□□□ -0.84
HLA-B-258ENST00000640615 KCTD17Q8N5Z5 321 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 SLAIN1Q8ND83 568 aa9.79□□□□□ -0.84
HLA-B-258ENST00000640615 AFG1LQ8WV93 481 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms