RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ANKS3Q6ZW76 656 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 POTEAQ6S8J7 498 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 MRPL48Q96GC5 212 aaKnown RBP20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 NFU1Q9UMS0 254 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 ATXN3P54252 364 aaPredicted RBP20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 KCNA1Q09470 495 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 ARMCX2Q7L311 632 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 LARP4BQ92615 738 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 EHD2Q9NZN4 543 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 COPEO14579 308 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 TRIP4Q15650 581 aaPredicted RBP20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 RNF139Q8WU17 664 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 PPARGC1AQ9UBK2 798 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 SOX13Q9UN79 622 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 MKRN3Q13064 507 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 SH3GL1Q99961 368 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 ADA2Q9NZK5 511 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 ANXA13P27216 316 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 USHBP1Q8N6Y0 703 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 DCTPP1Q9H773 170 aa20.69■□□□□ 0.9
CACNA1A-257ENST00000638009 DR1Q01658 176 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 TCIRG1Q13488 830 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 DIS3L2Q8IYB7 885 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 SLC4A7Q9Y6M7 1214 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 ULK4Q96C45 1275 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 CUL3Q13618 768 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 DNAJC24Q6P3W2 148 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 IQGAP2Q13576 1575 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 AP1S2P56377 157 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 RNF219Q5W0B1 726 aaPredicted RBP20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 KRCC1Q9NPI7 259 aaPredicted RBP20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 FIS1Q9Y3D6 152 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 DDX39AO00148 427 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 FAM107AO95990 144 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 S100A9P06702 114 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 NNTQ13423 1086 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 ALCAMQ13740 583 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 SPATA1Q5VX52 437 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 SMARCAL1Q9NZC9 954 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 TARSL2A2RTX5 802 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 PPARDQ03181 441 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 PDCLQ13371 301 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 PHACTR3Q96KR7 559 aa20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 DDX25Q9UHL0 483 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-257ENST00000638009 EIF2B5Q13144 721 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 KLHL38Q2WGJ6 581 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 GDAP1Q8TB36 358 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 IQSEC3Q9UPP2 1182 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 MORC2Q9Y6X9 1032 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 PARP10Q53GL7 1025 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 ARMCX5Q6P1M9 558 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 LMBR1LQ6UX01 489 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 TSSK1BQ9BXA7 367 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 TBK1Q9UHD2 729 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 V9GY48 417 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 SYCP2Q9BX26 1530 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 TRIM13O60858 407 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 RGS9BPQ6ZS82 235 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 DYMQ7RTS9 669 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 CCDC188H7C350 402 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 ASAP2O43150 1006 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 MBD4O95243 580 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 ZBED1O96006 694 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 SLC30A9Q6PML9 568 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 NSFL1CQ9UNZ2 370 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 ZNF839A8K0R7 811 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 KLC1Q07866 573 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 SLC9A5Q14940 896 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 USH1GQ495M9 461 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 POTEEQ6S8J3 1075 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 FAM180AQ6UWF9 173 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 DHTKD1Q96HY7 919 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 ZNF215Q9UL58 517 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 IQCA1LA6NCM1 817 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 DNAJC6O75061 913 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 RECQLP46063 649 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 MESDQ14696 234 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 E4F1Q66K89 784 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 SMARCAD1Q9H4L7 1026 aa20.67■□□□□ 0.9
CACNA1A-257ENST00000638009 RXRAP19793 462 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 NCKAP1LP55160 1127 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 COQ7Q99807 217 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 USE1Q9NZ43 259 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 AP3B1O00203 1094 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 GTPBP6O43824 516 aaPredicted RBP20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 PLTPP55058 493 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 RP1P56715 2156 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 KRT77Q7Z794 578 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 MRPL11Q9Y3B7 192 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 SLC44A4Q53GD3 710 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 KIAA1755Q5JYT7 1200 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 CCDC103Q8IW40 242 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms