RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 PPP1R13LQ8WUF5 828 aa18.06■□□□□ 0.48
PPFIA3-213ENST00000602905 KCNMB3Q9NPA1 279 aa18.06■□□□□ 0.48
PPFIA3-213ENST00000602905 BECN1Q14457 450 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 ZNF174Q15697 407 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 RILPL1Q5EBL4 403 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 GDF6Q6KF10 455 aaPredicted RBP18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 SH3RF1Q7Z6J0 888 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 AFAP1L1Q8TED9 768 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 GJA10Q969M2 543 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 UNC45AQ9H3U1 944 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 HIPK3Q9H422 1215 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 TBX21Q9UL17 535 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 TRPC6Q9Y210 931 aa18.05■□□□□ 0.48
PPFIA3-213ENST00000602905 NRCAMQ92823 1304 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 IGKV6D-21A0A0A0MT36 114 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 TRIM43BA6NCK2 446 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 TIMP1P01033 207 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 PDIA4P13667 645 aaKnown RBP18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 PPFIA1Q13136 1202 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 BFSP2Q13515 415 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 CCDC60Q8IWA6 550 aaPredicted RBP18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 RETREG2Q8NC44 543 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 ATP6V0A1Q93050 837 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 TRIM43Q96BQ3 446 aaPredicted RBP18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 PCYT2Q99447 389 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 RNPEPQ9H4A4 650 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 GABBR1Q9UBS5 961 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 PCDHA12Q9UN75 941 aa18.04■□□□□ 0.48
PPFIA3-213ENST00000602905 LTBP2Q14767 1821 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 POTEB3A0JP26 581 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 RRN3P2A6NIE6 340 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 HBP1O60381 514 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 DKC1O60832 514 aaKnown RBP eCLIP18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 CYP2C9P11712 490 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 SYT1P21579 422 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 TXKP42681 527 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 PPP2R5CQ13362 524 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 POTEBQ6S5H4 581 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 BRAPQ7Z569 592 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 HAS1Q92839 578 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 FAM167AQ96KS9 214 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 PPP1R12CQ9BZL4 782 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 SETD4Q9NVD3 440 aa18.03■□□□□ 0.48
PPFIA3-213ENST00000602905 OR52Z1P0C646 297 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 MDM2Q00987 491 aaPredicted RBP18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 PTK7Q13308 1070 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 PLCB4Q15147 1175 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 GRIK4Q16099 956 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 TMEM266Q2M3C6 531 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 NCAPH2Q6IBW4 605 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 TMEM199Q8N511 208 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 CAGE1Q8TC20 777 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 BADQ92934 168 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 NRBP2Q9NSY0 501 aa18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 MAFBQ9Y5Q3 323 aaPredicted RBP18.02■□□□□ 0.48
PPFIA3-213ENST00000602905 WNT7AO00755 349 aa18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 MAGEA10P43363 369 aaPredicted RBP18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 IGBP1P78318 339 aa18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 MFSD5Q6N075 450 aa18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 ATP8B4Q8TF62 1192 aa18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 VAV3Q9UKW4 847 aa18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 CEP131Q9UPN4 1083 aa18.01■□□□□ 0.47
PPFIA3-213ENST00000602905 EVPLQ92817 2033 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 LAD1O00515 517 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 PITPNM1O00562 1244 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 STX6O43752 255 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 INSRRP14616 1297 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 ZNF200P98182 395 aaPredicted RBP18■□□□□ 0.47
PPFIA3-213ENST00000602905 FPGSQ05932 587 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 EPHA7Q15375 998 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 ZNF484Q5JVG2 852 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 B3GNT9Q6UX72 402 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 TRMT1LQ7Z2T5 733 aaKnown RBP18■□□□□ 0.47
PPFIA3-213ENST00000602905 RSPH3Q86UC2 560 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 SPRYD3Q8NCJ5 442 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 LMBR1Q8WVP7 490 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 MTMR9Q96QG7 549 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 UBE2OQ9C0C9 1292 aaKnown RBP18■□□□□ 0.47
PPFIA3-213ENST00000602905 TMEM60Q9H2L4 133 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 TUBE1Q9UJT0 475 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 PCDHB6Q9Y5E3 794 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 COL1A2P08123 1366 aa18■□□□□ 0.47
PPFIA3-213ENST00000602905 IGSF9BQ9UPX0 1349 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 TREHO43280 583 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 RPLP2P05387 115 aaKnown RBP17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 P4HBP07237 508 aaKnown RBP17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 HOXC8P31273 242 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 CYP2C18P33260 490 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 TOB1P50616 345 aaPredicted RBP17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 PSMC5P62195 406 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 PTGDRQ13258 359 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 PPIGQ13427 754 aaKnown RBP eCLIP17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 NBR1Q14596 966 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 TAF2Q6P1X5 1199 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 CHRDL2Q6WN34 429 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 FERMT3Q86UX7 667 aa17.99■□□□□ 0.47
PPFIA3-213ENST00000602905 SERINC5Q86VE9 423 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms