RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 KCNV2Q8TDN2 545 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 FOXP1Q9H334 677 aaPredicted RBP16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 ZNHIT6Q9NWK9 470 aaKnown RBP16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 EHD2Q9NZN4 543 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 PCDHA1Q9Y5I3 950 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 MXRA7P84157 204 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 GRM4Q14833 912 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 GKAP1Q5VSY0 366 aaPredicted RBP16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 HHIPL2Q6UWX4 724 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 MICALL2Q8IY33 904 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 AENQ8WTP8 325 aaKnown RBP16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 BORCS6Q96GS4 357 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 ZDHHC15Q96MV8 337 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 ZNRF3Q9ULT6 936 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 CHD4Q14839 1912 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 GNAT1P11488 350 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 UBA7P41226 1012 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 PDCD2Q16342 344 aaPredicted RBP16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 ANKRD20A8PQ5CZ79 823 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 TLDC1Q6P9B6 456 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 CCDC170Q8IYT3 715 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 ARFGAP2Q8N6H7 521 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 LUC7L2Q9Y383 392 aaKnown RBP16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 DUSP10Q9Y6W6 482 aa16.8■□□□□ 0.28
PPFIA3-206ENST00000602655 C4AP0C0L4 1744 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 PHF20L1A8MW92 1017 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 TDP2O95551 362 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 C15orf52Q6ZUT6 534 aaKnown RBP16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 NUP58Q9BVL2 599 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 PICK1Q9NRD5 415 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 PAPOLBQ9NRJ5 636 aaKnown RBP16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 A0A087X0B3 334 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 FAM170AA1A519 330 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 GMPSP49915 693 aaPredicted RBP16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 GNAQP50148 359 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 GUCY2DQ02846 1103 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 KIF5AQ12840 1032 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 SUPT20HQ8NEM7 779 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 SEC16BQ96JE7 1060 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 FAM210AQ96ND0 272 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 A0A1W2PRG0 241 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 WNT10BO00744 389 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 DRP2Q13474 957 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 FAM83BQ5T0W9 1011 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 B4GALNT2Q8NHY0 566 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 SMCR8Q8TEV9 937 aaPredicted RBP16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 DYDC1Q8WWB3 177 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 TBC1D5Q92609 795 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 CCDC51Q96ER9 411 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 EPB41L5Q9HCM4 733 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 C6orf50Q9HD87 102 aa16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 NOP53Q9NZM5 478 aaKnown RBP16.79■□□□□ 0.28
PPFIA3-206ENST00000602655 CACNA1SQ13698 1873 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 POLE2P56282 527 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 SPATA1Q5VX52 437 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 REXO1Q8N1G1 1221 aaKnown RBP16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 CTNND2Q9UQB3 1225 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 C15orf41Q9Y2V0 281 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 TAF1LQ8IZX4 1826 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 SLX4Q8IY92 1834 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 PEX10O60683 326 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 PRPHP41219 470 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 PAPOLAP51003 745 aaKnown RBP16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 RAB27AP51159 221 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 HPS3Q969F9 1004 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 UBR3Q6ZT12 1888 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 KRT83P78385 493 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 EMBQ6PCB8 327 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 KDM7AQ6ZMT4 941 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 ZNF408Q9H9D4 720 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 STIM2Q9P246 746 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 CNOT7Q9UIV1 285 aaKnown RBP16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 FBXO2Q9UK22 296 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 PCDHA6Q9UN73 950 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 PCDHA4Q9UN74 947 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 CEP131Q9UPN4 1083 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 PCDHA8Q9Y5H6 950 aa16.78■□□□□ 0.28
PPFIA3-206ENST00000602655 CHMP2AO43633 222 aa16.77■□□□□ 0.28
PPFIA3-206ENST00000602655 ELF3P78545 371 aaPredicted RBP16.77■□□□□ 0.28
PPFIA3-206ENST00000602655 DYMQ7RTS9 669 aa16.77■□□□□ 0.28
PPFIA3-206ENST00000602655 MYH7P12883 1935 aa16.77■□□□□ 0.28
PPFIA3-206ENST00000602655 PALM3A6NDB9 673 aaPredicted RBP16.77■□□□□ 0.27
PPFIA3-206ENST00000602655 POTEMA6NI47 508 aa16.77■□□□□ 0.27
PPFIA3-206ENST00000602655 PCK1P35558 622 aa16.77■□□□□ 0.27
PPFIA3-206ENST00000602655 QPCTQ16769 361 aa16.77■□□□□ 0.27
PPFIA3-206ENST00000602655 MIS18BP1Q6P0N0 1132 aa16.77■□□□□ 0.27
PPFIA3-206ENST00000602655 JMJD4Q9H9V9 463 aa16.77■□□□□ 0.27
PPFIA3-206ENST00000602655 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.27
PPFIA3-206ENST00000602655 ANKRD33BA6NCL7 494 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 EVI5O60447 810 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 NDUFB10O96000 172 aa16.76■□□□□ 0.27
PPFIA3-206ENST00000602655 PCP11498 1178 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms