RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SH3GLB2Q9NR46 395 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 SLC9A2Q9UBY0 812 aa12.07□□□□□ -0.48
CLPTM1-211ENST00000589347 BRWD1Q9NSI6 2320 aa12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 KIF28PB7ZC32 967 aa12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 RPLP2P05387 115 aaKnown RBP12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 SERINC5Q86VE9 423 aa12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 UPF3BQ9BZI7 483 aaKnown RBP12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 SMARCAD1Q9H4L7 1026 aa12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 KCNH7Q9NS40 1196 aa12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 NRCAMQ92823 1304 aa12.06□□□□□ -0.48
CLPTM1-211ENST00000589347 CFAP54Q96N23 3096 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 CACNA1AO00555 2505 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 TLL1O43897 1013 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 ATP9AO75110 1047 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 CXCL10P02778 98 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 XBP1P17861 261 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 HOXC8P31273 242 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 THPOP40225 353 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 NLRP5P59047 1200 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 PPFIA1Q13136 1202 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 NTRK3Q16288 839 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 PKN1Q16512 942 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 PPP2R2DQ66LE6 453 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 TAF2Q6P1X5 1199 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 RSPH3Q86UC2 560 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 PLA2G4DQ86XP0 818 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 PHOSPHO2Q8TCD6 241 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 LMBR1Q8WVP7 490 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 CTAGE1Q96RT6 745 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 NCOA5Q9HCD5 579 aaKnown RBP12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 TMEM260Q9NX78 707 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 VPS54Q9P1Q0 977 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 PCDHA11Q9Y5I1 949 aa12.05□□□□□ -0.48
CLPTM1-211ENST00000589347 USP34Q70CQ2 3546 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 TRIOO75962 3097 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 FAM86C2PA6NEL3 165 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 RSPH10B2B2RC85 870 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 TREHO43280 583 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 CYP3A4P08684 503 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 RSPH10BP0C881 870 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 MRE11P49959 708 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 STK3Q13188 491 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 TRIM71Q2Q1W2 868 aaKnown RBP12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 ZNF618Q5T7W0 954 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 FAM160B1Q5W0V3 765 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 RNPEPQ9H4A4 650 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 BCAS3Q9H6U6 928 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 AGO4Q9HCK5 861 aaKnown RBP12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 COG5Q9UP83 839 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 MTCH2Q9Y6C9 303 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 STK36Q9NRP7 1315 aa12.04□□□□□ -0.48
CLPTM1-211ENST00000589347 ABHD14A-ACY1A0A1B0GW23 586 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 GSTTP1A0A1W2PQM5 241 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 RRN3P2A6NIE6 340 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 MEIS1O00470 390 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 LGR5O75473 907 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 MARK3P27448 753 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 SLC26A2P50443 739 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 ACTR2P61160 394 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 ZNF200P98182 395 aaPredicted RBP12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 IKBKEQ14164 716 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 GRIK4Q16099 956 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 GALNT17Q6IS24 598 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 WASF1Q92558 559 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 APBB2Q92870 758 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 ZNF577Q9BSK1 485 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 TBC1D22BQ9NU19 505 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 SETD4Q9NVD3 440 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 TUBE1Q9UJT0 475 aa12.03□□□□□ -0.48
CLPTM1-211ENST00000589347 ARID2Q68CP9 1835 aa12.02□□□□□ -0.48
CLPTM1-211ENST00000589347 PRR33A8MZF0 331 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 M0QZ92 97 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 BACH1O14867 736 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 NBNO60934 754 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 CTSHP09668 335 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 ARP10275 920 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 WDR5P61964 334 aaKnown RBP12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 KRT76Q01546 638 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 MIS18BP1Q6P0N0 1132 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 HERC6Q8IVU3 1022 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 SMAP1Q8IYB5 467 aaPredicted RBP12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 CYP2W1Q8TAV3 490 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 SEPT8Q92599 483 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 WNT8BQ93098 351 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 ZBED2Q9BTP6 218 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
CLPTM1-211ENST00000589347 COL4A6Q14031 1691 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 ZNF318Q5VUA4 2279 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 FAM86B1E9PN63 330 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 IPO5O00410 1097 aaKnown RBP12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 AMHP03971 560 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 FAM86B2P0C5J1 330 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 STAT5BP51692 787 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 RABGGTBP53611 331 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms