RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 HAS3O00219 553 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 LILRB3O75022 631 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 GGPS1O95749 300 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 CKBP12277 381 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 SELPP16109 830 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 SH3BP2P78314 561 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 DEFB103AP81534 67 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 TAP1Q03518 808 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 LAMC2Q13753 1193 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 MBTPS1Q14703 1052 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 DGKDQ16760 1214 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 QPCTQ16769 361 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 CELF3Q5SZQ8 465 aaKnown RBP8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 ZNF618Q5T7W0 954 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 FAM117BQ6P1L5 589 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 IGDCC4Q8TDY8 1250 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 ARNTL2Q8WYA1 636 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 SPATA33Q96N06 139 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 ASB2Q96Q27 587 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 GTF2IRD1Q9UHL9 959 aa8.74□□□□□ -1.01
GPATCH8-206ENST00000588554 SPTBN5Q9NRC6 3674 aaKnown RBP8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 PNMA6FA0A0J9YX94 578 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 hCG_1642624A0A1W2PR95 340 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 GCOM1H8Y6P7 765 aaPredicted RBP8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 J3QL48 77 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 SGSM2O43147 1006 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 PFKMP08237 780 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 POLR2MP0CAP2 368 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 ACTN1P12814 892 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 RXRAP19793 462 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 UBA1P22314 1058 aaKnown RBP8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 RFC2P35250 354 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 KCNQ1P51787 676 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 WDR5P61964 334 aaKnown RBP8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 MRPS9P82933 396 aaKnown RBP8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 GHRHRQ02643 423 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 TRDNQ13061 729 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 BFSP2Q13515 415 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 WTAPQ15007 396 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 TRIM71Q2Q1W2 868 aaKnown RBP8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 USP17L6PQ6QN14 398 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 SESTD1Q86VW0 696 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 MB21D2Q8IYB1 491 aaPredicted RBP8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 NCOA7Q8NI08 942 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 PPTC7Q8NI37 304 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 BAP1Q92560 729 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 MAP4K1Q92918 833 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 C16orf70Q9BSU1 422 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 RAPGEFL1Q9UHV5 662 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 MTUS1Q9ULD2 1270 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 MTCH2Q9Y6C9 303 aa8.73□□□□□ -1.01
GPATCH8-206ENST00000588554 CHD9Q3L8U1 2897 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 KIAA1217Q5T5P2 1943 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 LPXNO60711 386 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 PPFIA4O75335 1185 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 PLEKHA8P1O95397 391 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 F2P00734 622 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 SMCPP49901 116 aaPredicted RBP8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 NT5C2P49902 561 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 MRPS5P82675 430 aaKnown RBP8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 SP4Q02446 784 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 SEMA3FQ13275 785 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 GRB10Q13322 594 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 SKIV2LQ15477 1246 aaKnown RBP8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 RALYLQ86SE5 291 aaKnown RBP8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 CCDC82Q8N4S0 544 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 ADAMTS19Q8TE59 1207 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 AFAP1L1Q8TED9 768 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 RUFY2Q8WXA3 655 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 SLC9A7Q96T83 725 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 MAF1Q9H063 256 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 MLXIPQ9HAP2 919 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 LY9Q9HBG7 655 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 THEGQ9P2T0 379 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 RBM8AQ9Y5S9 174 aaKnown RBP8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 TET1Q8NFU7 2136 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 PTPRSQ13332 1948 aa8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 TRIP12Q14669 1992 aaPredicted RBP8.72□□□□□ -1.01
GPATCH8-206ENST00000588554 PRUNE2Q8WUY3 3088 aa8.71□□□□□ -1.01
GPATCH8-206ENST00000588554 ERICH2A1L162 156 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 SPATA31C2B4DYI2 1134 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 H3BRB1 525 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 TREHO43280 583 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 PRC1O43663 620 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 CXCL10P02778 98 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 HOXD8P13378 290 aaPredicted RBP8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 BMP1P13497 986 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 CCND2P30279 289 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 THPOP40225 353 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 KCNJ6P48051 423 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 PTK7Q13308 1070 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 UTP14CQ5TAP6 766 aaKnown RBP8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 CYFIP1Q7L576 1253 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 CATIPQ7Z7H3 387 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 TRIM50Q86XT4 487 aa8.71□□□□□ -1.02
GPATCH8-206ENST00000588554 ZNF654Q8IZM8 581 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms