RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 TDP2O95551 362 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 PFKMP08237 780 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 CHMP4BP1P59074 171 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 PTK7Q13308 1070 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 TAF2Q6P1X5 1199 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 Q7L0L9 218 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 ETNPPLQ8TBG4 499 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 ATP6V0A1Q93050 837 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 HIPK3Q9H422 1215 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 KCNMB3Q9NPA1 279 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 ZNF302Q9NR11 478 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 DISC1Q9NRI5 854 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 HDAC6Q9UBN7 1215 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 CEP131Q9UPN4 1083 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 DDX39AO00148 427 aaKnown RBP11.75□□□□□ -0.53
TOP3A-212ENST00000582122 LAD1O00515 517 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 EDIL3O43854 480 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 HBP1O60381 514 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 SMIM10L2AP0DMW4 78 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 SMIM10L2BP0DMW5 78 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 SYN1P17600 705 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 HOXC8P31273 242 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 RFC2P35250 354 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 FOSBP53539 338 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 RBL2Q08999 1139 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 PPP2R5CQ13362 524 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 PPIGQ13427 754 aaKnown RBP eCLIP11.75□□□□□ -0.533e-7■■■■□ 22.7
TOP3A-212ENST00000582122 CALCRLQ16602 461 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 RILPL1Q5EBL4 403 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 MFSD5Q6N075 450 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 PDXDC2PQ6P474 469 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-212ENST00000582122 BRAPQ7Z569 592 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 RSPH3Q86UC2 560 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
TOP3A-212ENST00000582122 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 TRPV6Q9H1D0 765 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 BCAS3Q9H6U6 928 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 NRBP2Q9NSY0 501 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 COL1A2P08123 1366 aa11.75□□□□□ -0.53
TOP3A-212ENST00000582122 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 BMP15O95972 392 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 CCNE2O96020 404 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 FPGSQ05932 587 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 PPFIA1Q13136 1202 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 MCTP1Q6DN14 999 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 GDF6Q6KF10 455 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-212ENST00000582122 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.74□□□□□ -0.53
TOP3A-212ENST00000582122 EXOC8Q8IYI6 725 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 ATP8B4Q8TF62 1192 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-212ENST00000582122 NOC4LQ9BVI4 516 aaKnown RBP11.74□□□□□ -0.53
TOP3A-212ENST00000582122 RAB34Q9BZG1 259 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 MTIF3Q9H2K0 278 aaKnown RBP11.74□□□□□ -0.53
TOP3A-212ENST00000582122 TRMT13Q9NUP7 481 aaKnown RBP11.74□□□□□ -0.53
TOP3A-212ENST00000582122 PCDHA12Q9UN75 941 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 MAFBQ9Y5Q3 323 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-212ENST00000582122 KAT6AQ92794 2004 aa11.74□□□□□ -0.53
TOP3A-212ENST00000582122 TRIM43BA6NCK2 446 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 SLC37A4O43826 429 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 BECN1Q14457 450 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 TMEM266Q2M3C6 531 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 EARS2Q5JPH6 523 aaKnown RBP11.73□□□□□ -0.53
TOP3A-212ENST00000582122 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 SWSAP1Q6NVH7 229 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 B3GNT9Q6UX72 402 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 RPAINQ86UA6 219 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 SERINC5Q86VE9 423 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 TRIM50Q86XT4 487 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 CKAP2LQ8IYA6 745 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 TRIM43Q96BQ3 446 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-212ENST00000582122 UNC45AQ9H3U1 944 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 PPME1Q9Y570 386 aa11.73□□□□□ -0.53
TOP3A-212ENST00000582122 MBLAC1A4D2B0 266 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-212ENST00000582122 MAGEB2O15479 319 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 DTNBO60941 627 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 P4HBP07237 508 aaKnown RBP11.72□□□□□ -0.53
TOP3A-212ENST00000582122 SELPP16109 830 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 MCM7P33993 719 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 PSMC5P62195 406 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 PLCB4Q15147 1175 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 EPHA7Q15375 998 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 GRIK4Q16099 956 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 XKR3Q5GH77 459 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 FAM109BQ6ICB4 259 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-212ENST00000582122 PSRC1Q6PGN9 363 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-212ENST00000582122 SH3RF1Q7Z6J0 888 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 POTEDQ86YR6 584 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 NME8Q8N427 588 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 ERMNQ8TAM6 284 aa11.72□□□□□ -0.53
TOP3A-212ENST00000582122 LMBR1Q8WVP7 490 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms