RNA–Protein interactions for RNA: ENST00000560954.5

USP8-214, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-214ENST00000560954 LIMCH1Q9UPQ0 1083 aa14.09□□□□□ -0.15
USP8-214ENST00000560954 IGSF9BQ9UPX0 1349 aa14.09□□□□□ -0.15
USP8-214ENST00000560954 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.08□□□□□ -0.16
USP8-214ENST00000560954 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.08□□□□□ -0.16
USP8-214ENST00000560954 TREHO43280 583 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 BAIAP3O94812 1187 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 FGBP02675 491 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 RPLP2P05387 115 aaKnown RBP14.08□□□□□ -0.16
USP8-214ENST00000560954 ZNF76P36508 570 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 ZNF200P98182 395 aaPredicted RBP14.08□□□□□ -0.16
USP8-214ENST00000560954 KRT76Q01546 638 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 SP4Q02446 784 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 MBTPS1Q14703 1052 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 NONOQ15233 471 aaKnown RBP eCLIP14.08□□□□□ -0.16
USP8-214ENST00000560954 FAM26DQ5JW98 314 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 UTP14CQ5TAP6 766 aaKnown RBP14.08□□□□□ -0.16
USP8-214ENST00000560954 B3GNT9Q6UX72 402 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 NECAB1Q8N987 351 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 SLC5A5Q92911 643 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 RIT2Q99578 217 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 LLPHQ9BRT6 129 aaKnown RBP14.08□□□□□ -0.16
USP8-214ENST00000560954 ZNF577Q9BSK1 485 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 SH2B1Q9NRF2 756 aaPredicted RBP14.08□□□□□ -0.16
USP8-214ENST00000560954 CXXC1Q9P0U4 656 aaPredicted RBP14.08□□□□□ -0.16
USP8-214ENST00000560954 COL1A2P08123 1366 aa14.08□□□□□ -0.16
USP8-214ENST00000560954 MSH4O15457 936 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 NBNO60934 754 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 GCFC2P16383 781 aaKnown RBP14.07□□□□□ -0.16
USP8-214ENST00000560954 CHMP4BP1P59074 171 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 PPFIA1Q13136 1202 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 RABEP1Q15276 862 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 PRR16Q569H4 304 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 MARCH8Q5T0T0 291 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 ZNF618Q5T7W0 954 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 TAF2Q6P1X5 1199 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 CCDC60Q8IWA6 550 aaPredicted RBP14.07□□□□□ -0.16
USP8-214ENST00000560954 ETNPPLQ8TBG4 499 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 AZI2Q9H6S1 392 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 CHD7Q9P2D1 2997 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 KCNJ14Q9UNX9 436 aa14.07□□□□□ -0.16
USP8-214ENST00000560954 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
USP8-214ENST00000560954 COL6A3P12111 3177 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 RALGAPA2Q2PPJ7 1873 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 PSMD10O75832 226 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 ACTN1P12814 892 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 STAT5BP51692 787 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 PLCB4Q15147 1175 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 GRIK4Q16099 956 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 PPP4R3AQ6IN85 833 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 CNKSR3Q6P9H4 555 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 RDM1Q8NG50 284 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 GLG1Q92896 1179 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 TNPO1Q92973 898 aaKnown RBP14.06□□□□□ -0.16
USP8-214ENST00000560954 ZSCAN31Q96LW9 406 aaPredicted RBP14.06□□□□□ -0.16
USP8-214ENST00000560954 SLC9A7Q96T83 725 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 SETD4Q9NVD3 440 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 MTMR10Q9NXD2 777 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 TUBE1Q9UJT0 475 aa14.06□□□□□ -0.16
USP8-214ENST00000560954 MAFBQ9Y5Q3 323 aaPredicted RBP14.06□□□□□ -0.16
USP8-214ENST00000560954 RRN3P2A6NIE6 340 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 JAK2O60674 1132 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 TDP2O95551 362 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 MMP1P03956 469 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 DNAJB2P25686 324 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 MGAT3Q09327 533 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 ZNF697Q5TEC3 545 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 FAM160B1Q5W0V3 765 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 MIS18BP1Q6P0N0 1132 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 OTOP2Q7RTS6 562 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 NEK8Q86SG6 692 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 DEFB123Q8N688 67 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 PHOSPHO2Q8TCD6 241 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 ATP8B4Q8TF62 1192 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 TBC1D32Q96NH3 1257 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 PBX4Q9BYU1 374 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 KCNMB3Q9NPA1 279 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 GJB4Q9NTQ9 266 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 NLRC5Q86WI3 1866 aa14.05□□□□□ -0.16
USP8-214ENST00000560954 TRANK1O15050 2925 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 CCDC194A0A1B0GVG4 234 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 WDR64B1ANS9 1081 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 RSPH10B2B2RC85 870 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 TBX3O15119 743 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 HBP1O60381 514 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 EFCAB14O75071 495 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 RSPH10BP0C881 870 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 MARK3P27448 753 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 SFNP31947 248 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 KRT2P35908 639 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 RAB30Q15771 203 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 INF2Q27J81 1249 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 DEFB128Q7Z7B8 93 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 OXER1Q8TDS5 423 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
USP8-214ENST00000560954 TTYH1Q9H313 450 aaPredicted RBP14.04□□□□□ -0.16
USP8-214ENST00000560954 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 PCDHA10Q9Y5I2 948 aa14.04□□□□□ -0.16
USP8-214ENST00000560954 TTC3P53804 2025 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms