RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PLS1Q14651 629 aa20.85■□□□□ 0.93
SEMA4B-215ENST00000560089 THAP9Q9H5L6 903 aa20.85■□□□□ 0.93
SEMA4B-215ENST00000560089 HELLSQ9NRZ9 838 aa20.85■□□□□ 0.93
SEMA4B-215ENST00000560089 GJA8P48165 433 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 HAND2P61296 217 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 MUM1Q2TAK8 710 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 ATG9AQ7Z3C6 839 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 NOSTRINQ8IVI9 506 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 KLHL7Q8IXQ5 586 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 C17orf50Q8WW18 174 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 TSKSQ9UJT2 592 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 MYH7BA7E2Y1 1941 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 NHSQ6T4R5 1651 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 MYO5AQ9Y4I1 1855 aaKnown RBP20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 TOB1P50616 345 aaPredicted RBP20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 USP46P62068 366 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 TIMM10P62072 90 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 ERVK-9P63128 1117 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 ASRGL1Q7L266 308 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 KBTBD3Q8NAB2 608 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 STK32AQ8WU08 396 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 ATXN2LQ8WWM7 1075 aaKnown RBP20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 NEUROD6Q96NK8 337 aa20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 RAB3IPQ96QF0 476 aaPredicted RBP20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 SRPRBQ9Y5M8 271 aaKnown RBP20.84■□□□□ 0.93
SEMA4B-215ENST00000560089 PALM3A6NDB9 673 aaPredicted RBP20.83■□□□□ 0.93
SEMA4B-215ENST00000560089 TMCC1O94876 653 aa20.83■□□□□ 0.93
SEMA4B-215ENST00000560089 ECHS1P30084 290 aa20.83■□□□□ 0.93
SEMA4B-215ENST00000560089 ZNF365Q70YC5 407 aa20.83■□□□□ 0.93
SEMA4B-215ENST00000560089 RETREG2Q8NC44 543 aa20.83■□□□□ 0.93
SEMA4B-215ENST00000560089 PNMA3Q9UL41 463 aa20.83■□□□□ 0.93
SEMA4B-215ENST00000560089 SBF2Q86WG5 1849 aa20.83■□□□□ 0.93
SEMA4B-215ENST00000560089 A0A087X0B3 334 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 TPBGLP0DKB5 382 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 NLRP5P59047 1200 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 RNASE9P60153 205 aaKnown RBP20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 TNNC1P63316 161 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 CUL1Q13616 776 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 SEPT14Q6ZU15 432 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 TTLL11Q8NHH1 800 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 TLCD1Q96CP7 247 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 FAM192AQ9GZU8 254 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 MTFR1LQ9H019 292 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 CARD9Q9H257 536 aa20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 COL5A3P25940 1745 aaPredicted RBP20.83■□□□□ 0.92
SEMA4B-215ENST00000560089 MCL1Q07820 350 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 FAM196AQ6ZSG2 479 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 SH3RF1Q7Z6J0 888 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 HAUS7Q99871 368 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 PRMT1Q99873 361 aaKnown RBP20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 CTTNBP2NLQ9P2B4 639 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 CTNNAL1Q9UBT7 734 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 CETN3O15182 167 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 SNX3O60493 162 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 PLEKP08567 350 aaPredicted RBP20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 ITGA6P23229 1130 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 TNNI3KQ59H18 835 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 DDX42Q86XP3 938 aaKnown RBP eCLIP20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 STAMQ92783 540 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 PTPRN2Q92932 1015 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 FAM136AQ96C01 138 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 DBNDD2Q9BQY9 259 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 CYP39A1Q9NYL5 469 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 FPGT-TNNI3KV9GXZ4 949 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 PEX11AO75192 247 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 RXRAP19793 462 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 METAP2P50579 478 aaKnown RBP eCLIP20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 CACNA2D1P54289 1103 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 CTSWP56202 376 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 RASIP1Q5U651 963 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 KLHDC7AQ5VTJ3 777 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 ANKRD13CQ8N6S4 541 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 EIF1ADQ8N9N8 165 aaKnown RBP20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 ZNF507Q8TCN5 953 aa20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 PCMTD1Q96MG8 357 aaPredicted RBP20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 USP15Q9Y4E8 981 aaPredicted RBP20.82■□□□□ 0.92
SEMA4B-215ENST00000560089 PTDSS1P48651 473 aaKnown RBP20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 RASSF7Q02833 373 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 IFIT5Q13325 482 aaKnown RBP20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 TBC1D9BQ66K14 1250 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 PROCA1Q8NCQ7 364 aaPredicted RBP20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 ASAP3Q8TDY4 903 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 LRRC4CQ9HCJ2 640 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 INTS9Q9NV88 658 aaKnown RBP20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 SUN2Q9UH99 717 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 PCDHB6Q9Y5E3 794 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 KCNA3P22001 575 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 CCNJLQ8IV13 435 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 PIGOQ8TEQ8 1089 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 DDX27Q96GQ7 796 aaKnown RBP20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 UBAC1Q9BSL1 405 aa20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 DDX23Q9BUQ8 820 aaKnown RBP20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 RTCBQ9Y3I0 505 aaKnown RBP20.81■□□□□ 0.92
SEMA4B-215ENST00000560089 hCG_2014768A0A024R1R8 64 aa20.8■□□□□ 0.92
SEMA4B-215ENST00000560089 BTBD18B2RXH4 712 aa20.8■□□□□ 0.92
SEMA4B-215ENST00000560089 BUB1O43683 1085 aa20.8■□□□□ 0.92
SEMA4B-215ENST00000560089 ZNF772Q68DY9 489 aaPredicted RBP20.8■□□□□ 0.92
SEMA4B-215ENST00000560089 EPSTI1Q96J88 318 aa20.8■□□□□ 0.92
SEMA4B-215ENST00000560089 ATP8A2Q9NTI2 1148 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms